Tobl022135.1
Basic Information
- Insect
- Troides oblongomaculatus
- Gene Symbol
- -
- Assembly
- GCA_029032895.1
- Location
- JARDWC010000447.1:5930458-5931057[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-16 1.3e-13 50.9 0.0 1 42 82 124 82 127 0.94 2 2 7.2 7.8e+03 -2.8 0.0 30 41 127 139 126 140 0.71
Sequence Information
- Coding Sequence
- ATGGAGCACACATACCCCCGTTATTCGAACGCCTGCATCGGCGGTGGCGGGCTCCAACCGGACCACAGCATGTACATTAATAACGTCATAAACCCACACATGGAGTCAGATATGAACGATTACGGACAAGGGTTAGGAGTGACTGGACCATCGCCTGGCCCCAGCTGTGTTACAGAACCACAAACTGCCCAAGAATCGGTACCGCAGACCCAAACTAAGCGACGTCGGACAACAAACCCACAATCCGAAGAGAACTTTCAACGAGCCCTCGAAGCCGTCCGTTTCGGTGGCATCGGTTTCTGTAAAGCAGCACGGATGTTCGGAGTAAACAATAGGACATTGTGGCTCGAGTACAAAAAGAAGGGATACCCGAACAATAGACCGAGCATTAAGAGTCGGATAAAGCGCGAGCACACCTCTCCGCCGCCTGAACCGAAGGAAGAAGCACCGCAACCCGAGCAACAGATGGCACTTATATGTCCTCCACATCCGGTACCAGTGGGTTTTATAGACTCCAGACCGATCGACTTCCCATTGCAAGGAGTACCACACAACTCACCCTTGAATATTCTCGGAATGAACTTTAATTCGATGCAATAG
- Protein Sequence
- MEHTYPRYSNACIGGGGLQPDHSMYINNVINPHMESDMNDYGQGLGVTGPSPGPSCVTEPQTAQESVPQTQTKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTSPPPEPKEEAPQPEQQMALICPPHPVPVGFIDSRPIDFPLQGVPHNSPLNILGMNFNSMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01496483; iTF_01316234; iTF_01139542; iTF_01146134; iTF_01148756; iTF_00025184;
- 90% Identity
- iTF_01496483;
- 80% Identity
- -