Ppro015593.2
Basic Information
- Insect
- Papilio protenor
- Gene Symbol
- -
- Assembly
- GCA_029286645.1
- Location
- JAGSMZ010000033.1:2242442-2243059[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-17 1.3e-13 50.9 0.0 1 42 88 130 88 133 0.94 2 2 2.7 7.7e+03 -2.8 0.0 30 41 133 145 132 146 0.71
Sequence Information
- Coding Sequence
- ATGATGGAGCACACATACCCTCGATACTCGAACGCGTGcgtcggcggcggcggcggcagcggcggtcTGCAACCTGACCACAGCATATACATGAACAACGTCATCAACCCGCACATGAATGACCCTGATATGAGCGACTACGGCCAGGGGCTCGGAGTGACTGGACCCTCGCCGGGGCCAAGCTGTTTCCCAGAAGCTCAAACCGCACAAGAAGTGGTGCCGCAGACTCAGCCCAAACGACGTCGCACAACAAACCCACAGTCCGAAGAGAACTTCCAGAGGGCACTTGAAGCTGTCCGTTTCGGCGGCATTGGTTTCTGTAAAGCGGCACGAATGTTCGGAGTGAACAATAGGACACTATGGCTCGAGTACAAGAAGAAGGGATATCCCAACAACCGGCCTAGTATTAAGAACAGGATAAAACGCGAGCACACTACTCCGCCGCCAGAACCAAAAGAAGAAGTTCAGCAACAGGATCAACAGATGGCATTAATATGCCCACCGCATTCCGTACCAGTGGGTTTCATAGATTCCCGACCTTTGGACTTCCCCCTGCAGGGCGTTCCCCACCATTCTCCCTTGAACATTCTCGGGATGAACTTTAATTCGATTCAATAG
- Protein Sequence
- MMEHTYPRYSNACVGGGGGSGGLQPDHSIYMNNVINPHMNDPDMSDYGQGLGVTGPSPGPSCFPEAQTAQEVVPQTQPKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKNRIKREHTTPPPEPKEEVQQQDQQMALICPPHSVPVGFIDSRPLDFPLQGVPHHSPLNILGMNFNSIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01495708;
- 90% Identity
- iTF_01139542;
- 80% Identity
- -