Basic Information

Insect: Trichomalopsis sarcophagae
Gene Symbol: -
Assembly: GCA_002249905.1
Location: NNAY01001572.1:1017-5834[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00071 0.076 13.3 0.9 1 23 350 372 350 372 0.97

2 18 0.044 4.7 7.7 1.5 2 23 417 438 417 438 0.95

3 18 0.0028 0.3 11.4 0.1 2 23 504 525 503 525 0.96

4 18 2.3e-05 0.0024 18.0 1.5 2 23 570 591 569 591 0.97

5 18 4.3e-05 0.0046 17.1 3.7 1 23 596 618 596 618 0.94

6 18 0.00033 0.035 14.4 0.6 1 21 625 645 625 649 0.92

7 18 0.0059 0.63 10.4 2.9 3 23 729 749 727 749 0.95

8 18 5.8e-05 0.0062 16.7 6.0 1 23 795 817 795 817 0.97

9 18 0.00018 0.019 15.2 0.7 1 20 822 841 822 843 0.94

10 18 0.02 2.1 8.8 0.4 2 23 854 875 854 875 0.97

11 18 8.1e-06 0.00087 19.4 0.7 2 23 913 934 912 934 0.97

12 18 1.6e-05 0.0017 18.5 1.6 1 23 939 961 939 961 0.95

13 18 1.5e-05 0.0017 18.5 1.6 1 23 967 989 967 989 0.98

14 18 7.1e-06 0.00076 19.6 0.5 1 23 1008 1030 1008 1030 0.95

15 18 2.4e-07 2.5e-05 24.3 0.6 1 23 1036 1058 1036 1058 0.99

16 18 2.6e-05 0.0027 17.8 0.2 1 23 1064 1086 1064 1086 0.97

17 18 0.0015 0.16 12.3 7.3 1 23 1092 1114 1092 1114 0.96

18 18 0.0067 0.71 10.2 0.4 1 20 1120 1139 1120 1141 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00071	0.076	13.3	0.9	1	23	350	372	350	372	0.97
2	18	0.044	4.7	7.7	1.5	2	23	417	438	417	438	0.95
3	18	0.0028	0.3	11.4	0.1	2	23	504	525	503	525	0.96
4	18	2.3e-05	0.0024	18.0	1.5	2	23	570	591	569	591	0.97
5	18	4.3e-05	0.0046	17.1	3.7	1	23	596	618	596	618	0.94
6	18	0.00033	0.035	14.4	0.6	1	21	625	645	625	649	0.92
7	18	0.0059	0.63	10.4	2.9	3	23	729	749	727	749	0.95
8	18	5.8e-05	0.0062	16.7	6.0	1	23	795	817	795	817	0.97
9	18	0.00018	0.019	15.2	0.7	1	20	822	841	822	843	0.94
10	18	0.02	2.1	8.8	0.4	2	23	854	875	854	875	0.97
11	18	8.1e-06	0.00087	19.4	0.7	2	23	913	934	912	934	0.97
12	18	1.6e-05	0.0017	18.5	1.6	1	23	939	961	939	961	0.95
13	18	1.5e-05	0.0017	18.5	1.6	1	23	967	989	967	989	0.98
14	18	7.1e-06	0.00076	19.6	0.5	1	23	1008	1030	1008	1030	0.95
15	18	2.4e-07	2.5e-05	24.3	0.6	1	23	1036	1058	1036	1058	0.99
16	18	2.6e-05	0.0027	17.8	0.2	1	23	1064	1086	1064	1086	0.97
17	18	0.0015	0.16	12.3	7.3	1	23	1092	1114	1092	1114	0.96
18	18	0.0067	0.71	10.2	0.4	1	20	1120	1139	1120	1141	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTCGAGGTAAATACGTCGGAGGCGCAGCAGCCGGACGACGTAGACATGCCGGCCCAGCTCGAAATCTGCCGTGTCTGCCTCCTCGGCAACCACTTGATGCGCGGACTCTTCCACCAGGACGTCGTACCGAATCTCTCGGAGAAGGCCATGAGCTTCGCCAACGTTAAGATAATGCCTGGAGATGGACTGCCCTCACACATTTGCTATGATTGTACGGACAAGCTTGATTCAGCCTACAAATTTAAGCTGCAGGTTGAGCAGGCTGACAGCATGTTGCGGGAGAGATTGGATTCACTGAATATGAAGGAAGAACTCTTCTTCAGTGATGTAGACGTGAACTTGCCATCTCATAGAAATGATATGGGAGGGATAACGGAAGAAAGTTTGCTTCTGAAGGATCACATGGACTTGCTCAATGTTCAAAAAATAACCCATCACGAGGATATCTGTCAGAGTCAAGATATAAAAGGGGAAGACCTGGAAGAACATAAGGATCATCAACAGTTACTTGAAAATGAGCAACACATGCAGCTTCAAAATGATGAAGAAATGCATAAGATCCACAATGAACAGCAGATTGAGAGTCAAGTCAGTGAAGCTATACAGCATGTGTCGGAGGAACACCACAATCAATCATTTGAAACACAAGAACTTCAAGAAATGATGTTCAAAGAAATTAGTCATCAGGAAGAAATGCAAGATGCATTAAACCATGCGCAGCAAATGACAATGCACGAACATAATTATGTAGCAGAAGTACAGGCTTGTGAAGTTCCGAACAAGGATGAATCAACCATCGAGGAATTTGAACTAAACAATAAGGCACATGCAGAAAACAATGTAATGAATGAAAGTATCCAAATTCATGAAGTGCCAGAAGAGTCTTCTCCAGTAGAAGGAACTCGAAGAAGTAAACGTAAGATAAATCAAAGGAAATTACAAGTCGACAGAGATTCAGATGAAGACAACTACTTTGAAAATCTTAATCTAAGTTCTAGATTAAAAAAGGTTCAGTCTGAAAAGTTAGATAAGGTTTACTTTGTGTGTTATCTATGTGACAGACAATTTATGTCAAAGGATGTTTTGAAGGAGCATATGTATTCTCATGAGGAGGTAAAAAAGACTCTGTCCATTTCGAAAAAGCAGACAGAAAAACTGCCAAAGACACCAGAAAAGCAAAATACTGAAACCGCAAGCCCGGTGTCGTCGAAAACACCGTCCAGTGGTAAACAACCAAATACCTGCCCTCATTGCGGAAAGGAATATCTTTATGTTATTTCGtttaataaacatttgaaGCAgcacgaaagagaaaaaggaaaggagATGAAGGAAGAGCCTATGCCATTAGAAGTTTCCTTTAAAGAAGACGAGAAATCTTTGGATTTCGATGGCTATGCAGACAATGAAGCAATTGGTTCAGAAAGTGAAGAAGAAATTGATGTTAAACGGGAAGAGGAAGTTTCGATAAAAACAGAATCAATGAAGAATGGCTTGGTCAAATGTAATGTTTGTGAAGAAGAGTTTGACACAATTGATGGACTCAAAAATCACCGTTCGCTACACGTTGTTGAAGGAATTCTCACTGAACCAGCTCTACAGGATGATACTGAAAAAGTTGAAGCATTAGATGCGAGCAACAATTTATGTGATAACGAAGAGCAAAACGATTCCAAGGTTGAAGAATGCAGAAATTTGAGCTGCCCGCACTGTTCAGCTGTTTTCAGTCATAGGAAAGCTTTGGCTCGTCACATAGACACCCATAATAGCAACAAGTACGTCTGTAAGCTTTGTCATCAGAGCTTTATGCGTAAGGATCATCTACGCCGTCATGCCGAAGCACATGGCAACAGATTGAAAAGTTACAGGTGCACCCAGTGTAACAAGAGTTTTGGTAACGAACTGACTTTGAGAAATCATCTAATAGCCACGAATCATAAGACGATAATGCATGGACAAGAATACGATCCGAACAAGAGAATCAAAAGGGTGGCtgctaaagctgcgcagaaaatTATCGACCAGATTAAGACTGATTTGAATTCAGACGAATTCGAGGAGGATAAAGATGATAATACTGAGGATCATAAAGTGGAATTGGACCCTCCTGCAGAAGAAGAGATCGAAAGCACATTGTTAGCAAAGAAACAGCAGCGAAACGCTAAAGCTCTGTTCTGTGCGACATGCAATCAGAAGTGCACCTCAAAACAAGCTCTCATGAAACATATGGAACAGCACATTAAAAACGAGAGTACATTAAAGCaagaaaaaggaaacaagCCAGAGGAATCGCGTGAATACGATGTTAACGATGAAGAAAACGAGGAGGATGACGACGACTTCGAAGGTGGTCTCGACTGGCCGATGGACACTCATGAATGTCCCACCTGTAAGAAATGCTACAGTACCAAGAAATCTCTTCTCCGGCATCAGCTGCTGCATGAGGAACCGAACTTTGAGTGTGACATCTGCAATGTCAAGTTTTATAGAAAGGATAAGCTTAAAGCACATTATGATAAGTGCTCGGAAAAAAATCCAGATCAGGTGCGAAAGTGCAACATTTGCGGGgatacttttgaaaataatgatattttgaaaGAACACAGAGCTAAACACGTAATGGAAGGAATATTGACGGAAGAAGATCTGCGAGAAATCGAACCGAGGCCAGAAGATAGAAATGCAGAGAAGACAACGCGGAAAAGAAGGACGGACATCGTTGGACTTGAGTGCACTGAATGTAACAAGCGATACACCTCCAGAAAAGGATTGCTTAGGCATATACAGGTACATGAAGGTAAAAAATATCTGTGCGATATTTGTCCCAAGAAATTTTATAGGCGAGAGCATTTGAAGATTCATGTCGCGAAACACAACATGGTCAAACCATACAAATGTCCACGATGCACCAAACGCTTCATTAAGGAAGAACAGCTGAACAACCATATAACCAAGCACGATAAAACGTTAAACAAAAAGGCGAAAACAGATTCCTCCGATACCTCCAAGAGATTCTTGTGCGAAATCTGTTCGAAGAAATTTACACAATCCACTACTTTGATAGCGCACTTGCGTGCCCACAATGGTATCAAACCTTACGTTTGTGAGGTCTGCTCTCGGCCATTTACGACAAACGCGTATCTTAAGATGCACATGAGAACGCACACGCAAGAGAGGCCCTATATCTGCCAGTACTGTTCGAGGGCGTTCGCGCGAGCTGACACTTTAGCTAACCATTTGACGTCGCACACGGGCGAAGCCAAGTACCACTGTAAGTATTGTTCGAAGCACTTCAGACGATTGAAATCGTTGAAGGAGCATGTATTCATTCATACTGGTCAGCGTCCGTATGCCTGTCCTACTTGCGACAGGCGGTTTAACAATAATGGCAGCAGGTACGCACACAGTAAGCGCTGCAAGCAAAACGTCATGCAGGCAGGCAACGCGGAAATCACTGTGCATAACATCAGTGTTGAACCACAAGAAATGCAAGAGATGCAGACTATTCAGGAGCTGCAGGAACATCAAGTCGAGCAGAATGATCAAGAACAACAGCTGCAGCTGCAACAAGAACAACATgagcagctgcagcagagTCAATTACAGCCCCAGAGGATACATCAAGCCACTATTAGTCAGGCGCAGATTATCAAGGGCCAAAATATCAAGACTATCACCATAACAAGACCAGATGGTGGATTAACTCAGCAGCATGTATTGGGACAAGAGATTCTAATGCCGCTGATATTGCCGCTTACGGTAACGCTCACCGATGTAGGCGAAGAGGTAATTCTACCAGAGGGcactaaaatttttacaacgtaa
Protein Sequence: MDAVEVNTSEAQQPDDVDMPAQLEICRVCLLGNHLMRGLFHQDVVPNLSEKAMSFANVKIMPGDGLPSHICYDCTDKLDSAYKFKLQVEQADSMLRERLDSLNMKEELFFSDVDVNLPSHRNDMGGITEESLLLKDHMDLLNVQKITHHEDICQSQDIKGEDLEEHKDHQQLLENEQHMQLQNDEEMHKIHNEQQIESQVSEAIQHVSEEHHNQSFETQELQEMMFKEISHQEEMQDALNHAQQMTMHEHNYVAEVQACEVPNKDESTIEEFELNNKAHAENNVMNESIQIHEVPEESSPVEGTRRSKRKINQRKLQVDRDSDEDNYFENLNLSSRLKKVQSEKLDKVYFVCYLCDRQFMSKDVLKEHMYSHEEVKKTLSISKKQTEKLPKTPEKQNTETASPVSSKTPSSGKQPNTCPHCGKEYLYVISFNKHLKQHEREKGKEMKEEPMPLEVSFKEDEKSLDFDGYADNEAIGSESEEEIDVKREEEVSIKTESMKNGLVKCNVCEEEFDTIDGLKNHRSLHVVEGILTEPALQDDTEKVEALDASNNLCDNEEQNDSKVEECRNLSCPHCSAVFSHRKALARHIDTHNSNKYVCKLCHQSFMRKDHLRRHAEAHGNRLKSYRCTQCNKSFGNELTLRNHLIATNHKTIMHGQEYDPNKRIKRVAAKAAQKIIDQIKTDLNSDEFEEDKDDNTEDHKVELDPPAEEEIESTLLAKKQQRNAKALFCATCNQKCTSKQALMKHMEQHIKNESTLKQEKGNKPEESREYDVNDEENEEDDDDFEGGLDWPMDTHECPTCKKCYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDTFENNDILKEHRAKHVMEGILTEEDLREIEPRPEDRNAEKTTRKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMVKPYKCPRCTKRFIKEEQLNNHITKHDKTLNKKAKTDSSDTSKRFLCEICSKKFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCSKHFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNVMQAGNAEITVHNISVEPQEMQEMQTIQELQEHQVEQNDQEQQLQLQQEQHEQLQQSQLQPQRIHQATISQAQIIKGQNIKTITITRPDGGLTQQHVLGQEILMPLILPLTVTLTDVGEEVILPEGTKIFTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00286642;
90% Identity: iTF_01035656; iTF_01036457; iTF_01037252;
80% Identity: -