Basic Information

Insect: Nasonia vitripennis
Gene Symbol: -
Assembly: GCA_009193385.2
Location: NC:20249038-20310401[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00074 0.062 13.3 0.9 1 23 350 372 350 372 0.97

2 18 0.046 3.8 7.7 1.5 2 23 417 438 417 438 0.95

3 18 0.0016 0.13 12.2 0.1 2 23 504 525 503 525 0.96

4 18 0.00033 0.028 14.4 2.3 2 23 573 594 572 594 0.97

5 18 4.5e-05 0.0037 17.1 3.7 1 23 599 621 599 621 0.94

6 18 0.00034 0.029 14.4 0.6 1 21 628 648 628 652 0.92

7 18 0.0061 0.52 10.4 2.9 3 23 732 752 730 752 0.95

8 18 6e-05 0.005 16.7 6.0 1 23 798 820 798 820 0.97

9 18 0.00018 0.015 15.2 0.7 1 20 825 844 825 846 0.94

10 18 0.02 1.7 8.8 0.4 2 23 857 878 857 878 0.97

11 18 1.5e-05 0.0012 18.6 0.9 2 23 916 937 915 937 0.97

12 18 1.7e-05 0.0014 18.5 1.6 1 23 942 964 942 964 0.95

13 18 1.6e-05 0.0013 18.5 1.6 1 23 970 992 970 992 0.98

14 18 7.3e-06 0.00062 19.6 0.5 1 23 1011 1033 1011 1033 0.95

15 18 2.4e-07 2.1e-05 24.3 0.6 1 23 1039 1061 1039 1061 0.99

16 18 2.6e-05 0.0022 17.8 0.2 1 23 1067 1089 1067 1089 0.97

17 18 0.0016 0.13 12.3 7.3 1 23 1095 1117 1095 1117 0.96

18 18 0.0069 0.58 10.2 0.4 1 20 1123 1142 1123 1144 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00074	0.062	13.3	0.9	1	23	350	372	350	372	0.97
2	18	0.046	3.8	7.7	1.5	2	23	417	438	417	438	0.95
3	18	0.0016	0.13	12.2	0.1	2	23	504	525	503	525	0.96
4	18	0.00033	0.028	14.4	2.3	2	23	573	594	572	594	0.97
5	18	4.5e-05	0.0037	17.1	3.7	1	23	599	621	599	621	0.94
6	18	0.00034	0.029	14.4	0.6	1	21	628	648	628	652	0.92
7	18	0.0061	0.52	10.4	2.9	3	23	732	752	730	752	0.95
8	18	6e-05	0.005	16.7	6.0	1	23	798	820	798	820	0.97
9	18	0.00018	0.015	15.2	0.7	1	20	825	844	825	846	0.94
10	18	0.02	1.7	8.8	0.4	2	23	857	878	857	878	0.97
11	18	1.5e-05	0.0012	18.6	0.9	2	23	916	937	915	937	0.97
12	18	1.7e-05	0.0014	18.5	1.6	1	23	942	964	942	964	0.95
13	18	1.6e-05	0.0013	18.5	1.6	1	23	970	992	970	992	0.98
14	18	7.3e-06	0.00062	19.6	0.5	1	23	1011	1033	1011	1033	0.95
15	18	2.4e-07	2.1e-05	24.3	0.6	1	23	1039	1061	1039	1061	0.99
16	18	2.6e-05	0.0022	17.8	0.2	1	23	1067	1089	1067	1089	0.97
17	18	0.0016	0.13	12.3	7.3	1	23	1095	1117	1095	1117	0.96
18	18	0.0069	0.58	10.2	0.4	1	20	1123	1142	1123	1144	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTCGAGGTAAATACGTCGGAGGCGCAGCAGCCGGACGACGTAGACATGCCGGCCCAGCTCGAAATCTGCCGTGTCTGCCTCCTCGGCAACCACTTGATGCGCGGACTCTTCCACCAGGACGTCGTACCGAATCTCTCGGAGAAGGCCATGAGCTTCGCCAACGTTAAGATAATGCCTGGAGATGGACTGCCCTCACACATTTGCTATGATTGTACGGACAAGCTTGATTCAGCCTACAAATTTAAGCTGCAGGTTGAGCAGGCTGACAGCATGTTGCGGGAGAGATTGGATTCACTGAATATGAAGGAAGAACTCTTCTTCAGTGATGTAGACGTGAACTTGCCATCTCATAGAACTGATATGGGAGGGATAACGGAAGAAAGTTTGCTTCTGAAGGATCACATGGATTTGCTAAATGTTCAAAAAATAACCCATCACGAGGATATCTGTCAGAGTCAAGATATAAAAGGGGAAGACCTGGAAGAACACAAAGATCATCAACAGTTACTTGAAAATGAGCAACACATGCAGCTTCAAAGTGATGAAGAAATGCATAGGATCCACAATGAACAGCAGATTGAGAGTCAAGTCAGTGAAGCTATACAGCACGTGTCGGAGGAACACCACAATCAATCATTTGAAACACAAGAACTTCAAGAAATGATGTTCAAAGAAATTAGTCATCAGGAGGAAATGCAAGAAGCATTAAACCATGCGCAGCAAATGACAATGCACGAACATAATTATGTAGCAGAAGTACAGTCTTGTGAAGTTCCGAACAAGGATGAATCAACCATCGAGGTATTTGAACTAAACGATAAGGAACATGCAGAAAACAATGTAATGAATGAAAGTATCCAAATTCATGAAGTGCCAGAAGAGTCTTCTCCAGTAGAAGGAACTCGAAGAAGTAAACGTAAGATAAATCAAAGGAAATTACAAGTCGACAGAGATTCAGATGAAGACAACTACTTTGAAAATCTTAATCTAAGTTCTAGATTAAAAAAGGTTCAGTCTGAAAAGTTAGATAAGGTTTACTTTGTGTGTTATCTATGTGACAGACAATTTATGTCAAAGGATGTTTTGAAGGAGCATATGTATTCTCATGAGGAGATAAAAAAGACTCTGTCCATGTCGAAAAAGCAGACAGAAAAACTGCCAAAGACACCAGAAAAGCAAAATACTGAAACCGCAAGCCCGACGTCGTCGAAAACACCGTCCAGTGGTAAACAACCAAATACCTGCCCTCATTGCGGAAAGGAATATCTTTATGTTATTTCGTTTAATAAACATTTGAAGCAGcacgaaagagaaaaaggaaaggagATGAAGGAAGAGCCTATGCCATTAGAAATTTCCTTTAAAGAAGACGAGAAATCTTTGGATTTCGATGGCTATGCAGATAATGAAGCAATTGGTTCAGAAAGTGAAGAAGAAATTGCTGTTAAACGGGAAGAGGAAGTTTCGATAAAAACAGAATCAATGAAGAATGGCTTGGTCAAATGTAACATTTGTGAAGAAGAGTTTGACACAATTGATGGACTTAAAAATCACCGTTCGCTACACGTTGTTGAAGGAATTCTCACTGAGCCAGCTCTACAGGATGATACTGAAAATACTGAAAAAGTTGAAGCATTAGATGTGAGCAACAATTTATGTGATAATGAAGAGCAAAATGATTCCAAGGTTGAAGAATGCAGAAATTTGAGCTGCCCGCACTGTTCAGCTGTTTTTATTCATAGGAAAGCTTTGGCTCATCACATAGACACCCATAATAGCAACAAGTACGTCTGTAAGCTTTGTCATCAGAGCTTTATGCGTAAGGATCATCTACGCCGTCATGCCGAAGCACATGGCAACAGATTGAAAAGTTACAGGTGCACCCAGTGTAACAAGAGTTTTGGTAACGAACTGACTTTGAGAAATCATCTAATAGCCACGAATCATAAGACGATAATGCATGGACAAGAATACGATCCGAACAAGAGAATCAAAAGGGTGGCTGCTAAAGCTGCGCAGAAAATTATCGACCAGATTAAGACTGATTTGAATTCAGACGAATTCGAGGAGGATAAAGATGATAATACTGAGGATCATAAAGAGGAATTGGACCCTCCTGCAGAAGAAGAGATCGAAAGCACATTATCAGCAAAGAAACAGCAGCGAAACTCTAAAGCTCTGTTCTGTGCGACATGCAATCAGAAGTGCACCTCAAAACAAGCTCTCATGAAACATATGGAACAGCACATTAAAACCGAGAGTACAGTAAAGCAAGAAAAAGGAAACAAGCCAGAGGAATCGCGTGAACACGATGTTAACGATGAAGAAAACGAGGAGGATGACGACGACTTCGAAGGTGGTCTCGACTGGCCGATAGACACTCATGAATGTCCCACCTGTAAGAAATGCTACAGTACCAAGAAATCTCTTCTCCGGCATCAGCTGCTGCATGAGGAACCGAACTTTGAGTGTGACATCTGCAATGTCAAGTTTTATAGAAAGGATAAACTTAAAGCACATTATGATAAGTGCTCGGAAAAAAATCCGGATCAGGTGCGAAAGTGCAACATTTGCGGGGatacttttgaaaataatgatattttgAAAGAACACAGAGCTAAACACGTAATGGAAGGAATATTGACGGAAGAAGATCTGCGAGAAATCGAACCGAGGCCAGAAGATAGAAATGCAGAGAAGACAACGCGGAAAAGAAGGACGGACATCGTTGGACTTGAGTGCACTGAATGTAACAAGCGATACACCTCCAGAAAAGGATTGCTTAGGCATCTACAGGTACATGAAGGTAAAAAATATCTGTGCGATATTTGTCCCAAGAAATTTTATAGGCGAGAGCATTTGAAGATTCATGTCGCGAAACACAACATGGTCAAACCATACAAATGTCCACGATGCACCAAACGCTTCATTAAGGAAGAACAGCTGAACAACCATATAACCAAGCACGATAAAACGTTAAACAAAAAGGCGAAAACAGATTCCTCCGACACCTCCAAGAGATTCTTGTGCGAAATCTGTTCGAAGAAATTTACACAATCCACTACTTTGATAGCGCACTTGCGTGCCCATAATGGTATCAAACCTTACGTATGTGAGGTCTGTTCTCGGCCATTTACGACGAACGCGTATCTTAAGATGCACATGAGAACGCACACGCAAGAGAGGCCCTATATCTGCCAGTACTGTTCGAGGGCGTTCGCGCGAGCTGACACTTTAGCTAACCATTTGACGTCGCACACGGGCGAAGCCAAGTACCACTGTAAGTATTGTTCGAAGCACTTCAGACGATTGAAATCGTTGAAGGAGCATGTATTCATTCATACTGGTCAGCGTCCGTATGCCTGTCCTACTTGCGACAGGCGGTTTAACAATAACGGCAGCAGGTACGCACACAGTAAGCGCTGCAAGCAAAACGTCATGCAGGCCGGCAACGCGGAAATCACTGTGCATAACATCAATGTTGAACCACAAGAAATGCAAGAGATGCAGACTATTCAGGAGCTGCAGGAACATCAAGTCGAGCAGGATGATCAAGAACAACAGCTGCAGCTGCAACAAGAACAACATGAGCAGTTGCAGCAGAGTCAATTACAGCCCCAGAGGATACATCAAGCCACTATTAGTCAGGCGCAGATTATCAAGGGCCAAAATATCAAGACTATCACCATAACAAGACCAGATGGTGGATTAACTCAGCAGCATGTATTGGGACAAGAGATTCTTATGCCGCTGATATTGCCGCTTACGGTAACGCTCACCGATGTAGGCGAAGAGGTGATTCTACCAGAGGGcactaaaatttttacaacgtaa
Protein Sequence: MDAVEVNTSEAQQPDDVDMPAQLEICRVCLLGNHLMRGLFHQDVVPNLSEKAMSFANVKIMPGDGLPSHICYDCTDKLDSAYKFKLQVEQADSMLRERLDSLNMKEELFFSDVDVNLPSHRTDMGGITEESLLLKDHMDLLNVQKITHHEDICQSQDIKGEDLEEHKDHQQLLENEQHMQLQSDEEMHRIHNEQQIESQVSEAIQHVSEEHHNQSFETQELQEMMFKEISHQEEMQEALNHAQQMTMHEHNYVAEVQSCEVPNKDESTIEVFELNDKEHAENNVMNESIQIHEVPEESSPVEGTRRSKRKINQRKLQVDRDSDEDNYFENLNLSSRLKKVQSEKLDKVYFVCYLCDRQFMSKDVLKEHMYSHEEIKKTLSMSKKQTEKLPKTPEKQNTETASPTSSKTPSSGKQPNTCPHCGKEYLYVISFNKHLKQHEREKGKEMKEEPMPLEISFKEDEKSLDFDGYADNEAIGSESEEEIAVKREEEVSIKTESMKNGLVKCNICEEEFDTIDGLKNHRSLHVVEGILTEPALQDDTENTEKVEALDVSNNLCDNEEQNDSKVEECRNLSCPHCSAVFIHRKALAHHIDTHNSNKYVCKLCHQSFMRKDHLRRHAEAHGNRLKSYRCTQCNKSFGNELTLRNHLIATNHKTIMHGQEYDPNKRIKRVAAKAAQKIIDQIKTDLNSDEFEEDKDDNTEDHKEELDPPAEEEIESTLSAKKQQRNSKALFCATCNQKCTSKQALMKHMEQHIKTESTVKQEKGNKPEESREHDVNDEENEEDDDDFEGGLDWPIDTHECPTCKKCYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDTFENNDILKEHRAKHVMEGILTEEDLREIEPRPEDRNAEKTTRKRRTDIVGLECTECNKRYTSRKGLLRHLQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMVKPYKCPRCTKRFIKEEQLNNHITKHDKTLNKKAKTDSSDTSKRFLCEICSKKFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCSKHFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNVMQAGNAEITVHNINVEPQEMQEMQTIQELQEHQVEQDDQEQQLQLQQEQHEQLQQSQLQPQRIHQATISQAQIIKGQNIKTITITRPDGGLTQQHVLGQEILMPLILPLTVTLTDVGEEVILPEGTKIFTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00286642;
90% Identity: iTF_01487237;
80% Identity: -