Basic Information

Insect: Nasonia giraulti
Gene Symbol: -
Assembly: GCA_000004775.1
Location: GL274595.1:260835-265491[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0011 0.07 13.3 0.9 1 23 350 372 350 372 0.97

2 17 0.065 4.3 7.7 1.5 2 23 417 438 417 438 0.95

3 17 3.3e-05 0.0022 18.1 1.5 2 23 544 565 543 565 0.97

4 17 6.4e-05 0.0042 17.2 3.7 1 23 570 592 570 592 0.94

5 17 0.00049 0.032 14.4 0.6 1 21 599 619 599 623 0.92

6 17 0.0088 0.58 10.4 2.9 3 23 703 723 701 723 0.95

7 17 8.6e-05 0.0057 16.8 6.0 1 23 769 791 769 791 0.97

8 17 0.00026 0.017 15.2 0.7 1 20 796 815 796 817 0.94

9 17 0.029 1.9 8.8 0.4 2 23 828 849 828 849 0.97

10 17 1.2e-05 0.0008 19.5 0.7 2 23 887 908 886 908 0.97

11 17 2.4e-05 0.0016 18.5 1.6 1 23 913 935 913 935 0.95

12 17 2.3e-05 0.0015 18.6 1.6 1 23 941 963 941 963 0.98

13 17 1.1e-05 0.0007 19.6 0.5 1 23 982 1004 982 1004 0.95

14 17 3.5e-07 2.3e-05 24.3 0.6 1 23 1010 1032 1010 1032 0.99

15 17 3.8e-05 0.0025 17.9 0.2 1 23 1038 1060 1038 1060 0.97

16 17 0.0023 0.15 12.3 7.3 1 23 1066 1088 1066 1088 0.96

17 17 0.0099 0.66 10.3 0.4 1 20 1094 1113 1094 1115 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0011	0.07	13.3	0.9	1	23	350	372	350	372	0.97
2	17	0.065	4.3	7.7	1.5	2	23	417	438	417	438	0.95
3	17	3.3e-05	0.0022	18.1	1.5	2	23	544	565	543	565	0.97
4	17	6.4e-05	0.0042	17.2	3.7	1	23	570	592	570	592	0.94
5	17	0.00049	0.032	14.4	0.6	1	21	599	619	599	623	0.92
6	17	0.0088	0.58	10.4	2.9	3	23	703	723	701	723	0.95
7	17	8.6e-05	0.0057	16.8	6.0	1	23	769	791	769	791	0.97
8	17	0.00026	0.017	15.2	0.7	1	20	796	815	796	817	0.94
9	17	0.029	1.9	8.8	0.4	2	23	828	849	828	849	0.97
10	17	1.2e-05	0.0008	19.5	0.7	2	23	887	908	886	908	0.97
11	17	2.4e-05	0.0016	18.5	1.6	1	23	913	935	913	935	0.95
12	17	2.3e-05	0.0015	18.6	1.6	1	23	941	963	941	963	0.98
13	17	1.1e-05	0.0007	19.6	0.5	1	23	982	1004	982	1004	0.95
14	17	3.5e-07	2.3e-05	24.3	0.6	1	23	1010	1032	1010	1032	0.99
15	17	3.8e-05	0.0025	17.9	0.2	1	23	1038	1060	1038	1060	0.97
16	17	0.0023	0.15	12.3	7.3	1	23	1066	1088	1066	1088	0.96
17	17	0.0099	0.66	10.3	0.4	1	20	1094	1113	1094	1115	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTCGAGGTAAATACGTCGGAGGCGCAGCAGCCGGACGACGTAGACATGCCGGCTCAGCTCGAAATCTGCCGTGTCTGCCTCCTCGGCAACCACTTGATGCGCGGACTCTTCCACCAGGACGTCGTACCGAATCTCTCGGAGAAGGCCATGAGCTTCGCCAACGTTAAGATAATGCCTGGAGATGGACTGCCCTCACACATTTGCTATGATTGTACGGACAAGCTTGATTCAGCCTACAAATTTAAGCTGCAGGTTGAGCAGGCTGACAGCATGTTGCGGGAGAGATTGGATTCACTGAATATGAAGGAAGAACTCTTCTTCAGTGATGTAGACGTGAACTTGCCATCTCATAGAAATGATATGGGAGGGATAACGGAAGAAAGTTTGCTTCTGAAGGATCACATGGACTTGTTAAATGTTCAAAAAATAACCCATCACGAGAATATCTGTCAGAGTCAAGATATAAAAGGGGAAGACCTGGAAGAACACAAAGATCATCAACAGTTACTTGAAAATGATCAACACATGCAGCTTCAAAGTGATGAAGAAATGCATAAGATCCACAATGAACAGCAGATTGAGAGTCAAGTCAGTGAAGCTATACAGCACGTGTCGGAGGAACACCACAATCAATCATTTGAAACACAAGAACTTCAAGAAATGATGTTCAAAGAAATTAGTCATCAGGAAGAAATGCAAGAAGCTTTAAACCATGCGCAGCAAATGACAATGCACGAACATAATTATGTAGCAGAAGTACAGTCTTGTGAAGTTCCAAACAAGGATGAATCAACCATCAAgGAATTTGAACTAAACGATAAGGAACATGCAGAAAACAATGTAATGAATGAAAGTATCCAAATTCATGAAGTGCCAGAAGAGTCTTCTCCAGTTGAAGGAACTCGAAGAAGTAAACGTAAGATAAATCAAAGGAAATTACAAGTCGACAGAGATTCAGATGAAGACAACTACTTTGAAAATCTTAATCTAAGTTCTAGATTAAAAAAGGTTCAGTCTGAAAAGTTAGACAAGGTTTACTTTGTTTGTTATCTATGTGACAGACAATTTATGTCAAAGGATGTTTTGAAGGAGCATATGTATTCTCATGAGGAGGTAAAAAAGACTCTGTCCATGTCGAAAAAGCAGACAGAAAAACTGCCGAAGACACCAGAAAAGCAAAATACTGAAACCGCAAGCCCGACGTCGTCGAAAACACCGTCCAGTGGTAAACAACCAAATACCTGCCCTCATTGCGGAAAGGAATATCTTTATGTTATTTCGtttaataaacatttgaaGCAgcacgaaagagaaaaaggaaaggagaTGAAGGAAGAGCCTATGCCATTAGAAGTTTCCTTTAAAGAAGACGAGAAATCTTTAGATTTTGATGGCTATGCAGACAATGAAGCAATTGGTTCAGAAAGTGAAGAAGAAATTGCTGTTAAACGGGAAGAGgaagtttcaataaaaacagaaTCAATGAAGAATGGCTTGGAATTCTCACTGAACCAGCTCTACAGGATGAATACTGAAAAAGTTGAAGCATTAGATGCGAGCAACAATTTATGTGATAATGAAGAGCAAAATGATTCCAAGGTTGAAGACTGCAGAAATTTGAGCTGCCCGCACTGTTCAGCTGTTTTCAGTCATAGGAAAGCTTTGGCTCGTCACATAGACACCCATAATAGCAACAAGTACGTCTGTAAGCTTTGTCATCAGAGCTTTATGCGTAAGGATCATCTACGCCGTCATGCCGAAGCACATGGCAACAGATTGAAAAGTTATAGGTGCACCCAGTGTAACAAGAGTTTTGGTAACGAACTGACTTTGAGAAATCATCTAATAGCCACGAATCATAAGACGATAATGCATGGACAAGAATACGATCCGAACAAGAGAATCAAAAGGGTGGCTGCTAAAGCTGCGCAGAAAATTATCGACCAGATTAAGACTGATTTAAATTCAGACGAATTCGAGGAGGATAAAGATGATAATACTGAGGATCATAAAGAGGAATTGGACCCTCCTGCAGAAGAAGAGATCGAAAGCACATTATCAGCAAAGAAACAGCAGCGAAACGCTAAAGCTCTGTTCTGTGCGACATGCAATCAGAAGTGCACCTCAAAACAAGCTCTCATGAAACATATGGAACAGCACATTAAAAACGAGAGTACAGTGAAGcaagaaaaaggaaacaagCCAGAGGAATCGCGTGAACACGATGTTAACGATGAAGAAAACGAGGAGGATGACGACGACTTCGAAGGTGGTCTCGACTGGCCGATGGACACTCATGAATGTCCCACCTGTAAGAAATGCTACAGTACCAAGAAATCTCTTCTCCGACATCAGCTGCTGCATGAGGAACCGAACTTTGAGTGTGACATCTGCAATGTCAAGTTTTATAGAAAGGATAAGCTTAAAGCACATTATGATAAGTGCTCGGAGAAAAATCCGGATCAGGTGCGAAAGTGCAACATTTGCGGggatacttttgaaaataatgatattttgaAAGAACACAGAGCTAAACACGTAATGGAAGGAATATTGACGGAAGAAGATCTGCGAGAAATCGAACCGAGGCCAGAAGATAGAAATGCAGAGAAGACAACGCGGAAAAGAAGGACGGACATCGTTGGACTTGAGTGCACTGAATGTAACAAGCGATACACCTCCAGAAAAGGATTGCTTAGGCATATACAGGTACATGAAGGTAAAAAATATCTGTGCGATATTTGTCCCAAGAAATTTTATAGGCGAGAGCATTTGAAGATTCATGTCGCGAAACACAACATGGTCAAACCATACAAATGTCCACGATGCACCAAACGCTTCATTAAGGAAGAACAGCTGAACAACCATATAACCAAGCACGACAAAACGTTGAACAAAAAGGCGAAAACAGATTCCTCCGATACCTCCAAGAGATTCTTGTGCGAAATCTGTTCGAAGAAATTTACACAATCCACTACTTTGATAGCGCACTTGCGTGCTCACAATGGTATCAAACCTTACGTTTGTGAGGTCTGCTCTCGGCCATTTACGACGAACGCGTATCTTAAGATGCACATGAGAACGCACACGCAAGAGAGACCCTATATCTGCCAGTACTGTTCGAGGGCGTTCGCGCGAGCTGACACTTTAGCTAACCATTTGACGTCGCACACGGGCGAAGCCAAGTACCACTGTAAGTATTGTTCGAAGCACTTCAGACGATTGAAATCGTTGAAGGAGCATGTATTCATTCATACTGGTCAGCGTCCGTATGCCTGTCCTACTTGCGACAGGCGGTTTAACAATAACGGCAGCAGGTACGCACACAGTAAGCGCTGCAAGCAAAACGTCATGCAGGCGGGCAACGCGGAAATCACTGTGCATAACATCAATGTTGAACCACAAGAAATGCAAGAGATGCAGACTATTCAGGAGCTGCAGGAACATCAAGTCGAGCAGGATGATCAAGAAcaacagctgcagctgcaacAAGAACAACATGAGCAGTTGCAGCAGAGTCAATTACAGCCCCAGAGGATACATCAAGCCACTATTAGTCAGGCGCAGATTATCAAGGGCCAAAATATCAAGACTATCACCATAACAAGACCAGATGGTGGATTAACTCAGCAGCATGTATTGGGACAAGAGATTCTTATGCCGCTGATATTGCCGCTTACGGTAACGCTCACCGATGTAGGCGAAGAGGTGATTCTACCAGAGGGcactaaaatttttacaacgtaa
Protein Sequence: MDAVEVNTSEAQQPDDVDMPAQLEICRVCLLGNHLMRGLFHQDVVPNLSEKAMSFANVKIMPGDGLPSHICYDCTDKLDSAYKFKLQVEQADSMLRERLDSLNMKEELFFSDVDVNLPSHRNDMGGITEESLLLKDHMDLLNVQKITHHENICQSQDIKGEDLEEHKDHQQLLENDQHMQLQSDEEMHKIHNEQQIESQVSEAIQHVSEEHHNQSFETQELQEMMFKEISHQEEMQEALNHAQQMTMHEHNYVAEVQSCEVPNKDESTIKEFELNDKEHAENNVMNESIQIHEVPEESSPVEGTRRSKRKINQRKLQVDRDSDEDNYFENLNLSSRLKKVQSEKLDKVYFVCYLCDRQFMSKDVLKEHMYSHEEVKKTLSMSKKQTEKLPKTPEKQNTETASPTSSKTPSSGKQPNTCPHCGKEYLYVISFNKHLKQHEREKGKEMKEEPMPLEVSFKEDEKSLDFDGYADNEAIGSESEEEIAVKREEEVSIKTESMKNGLEFSLNQLYRMNTEKVEALDASNNLCDNEEQNDSKVEDCRNLSCPHCSAVFSHRKALARHIDTHNSNKYVCKLCHQSFMRKDHLRRHAEAHGNRLKSYRCTQCNKSFGNELTLRNHLIATNHKTIMHGQEYDPNKRIKRVAAKAAQKIIDQIKTDLNSDEFEEDKDDNTEDHKEELDPPAEEEIESTLSAKKQQRNAKALFCATCNQKCTSKQALMKHMEQHIKNESTVKQEKGNKPEESREHDVNDEENEEDDDDFEGGLDWPMDTHECPTCKKCYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDTFENNDILKEHRAKHVMEGILTEEDLREIEPRPEDRNAEKTTRKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMVKPYKCPRCTKRFIKEEQLNNHITKHDKTLNKKAKTDSSDTSKRFLCEICSKKFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCSKHFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNVMQAGNAEITVHNINVEPQEMQEMQTIQELQEHQVEQDDQEQQLQLQQEQHEQLQQSQLQPQRIHQATISQAQIIKGQNIKTITITRPDGGLTQQHVLGQEILMPLILPLTVTLTDVGEEVILPEGTKIFTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00286642;
90% Identity: iTF_01487237;
80% Identity: -