Tzet000894.1
Basic Information
- Insect
- Trachymyrmex zeteki
- Gene Symbol
- tfip11
- Assembly
- GCA_001594055.1
- Location
- NW:958224-961743[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-87 1.1e-83 280.3 17.2 1 275 389 664 389 664 0.94 2 2 0.038 2.1e+02 0.6 0.1 248 272 682 706 681 709 0.89
Sequence Information
- Coding Sequence
- ATGTCTGAAGACGAAGTGGAAAGCTTTGAAGTTACTGATTATGATTTGGATAATGAATTTAACTTTGCTTGTCCCCGACGCAAACTGTCGAAGAAACAACAAATGCTAGGAATATGGGCAGATGATAGTGATGAGGATGAATTATCTACCAGACCATCTTTTAAGACTTTTAACAAGGGTCCTAAGAATTATACAGCTCCAGTTAATTTCGTCGCTGGTGGTATCCAACAAGCAGGACAACCAAAAGAGAAGGAAGCTAAAGATGAtgaagaagatgaagaagagACGCAGGATTCTCAAACAAAGCACAGTAGCTCGAGttCAGAAGATGAGAggtcaaataattcaaaatcacGTCCATCCTTCTCTTTGAATTTGGACAGCGACATCGCAGGTCTACGTAAAAAGCGCCATCAAGTGAATCCCTTATTGTTGAAAAGTGGAATGGGTAGTTGGGAAGTGCACACAAAGGGCATTGGTGCTAAATTATTGCTACAGatggGATTTGAACCTGGTAAGGGCTTAGGTAAACAATTACAAGGAATAAGCGCACCAGTAGAAGCACATCTCAGAAAAGGAAGAGGTGCAATAGGTGCATATGGTCCAGAAAAAACACCAAAGATtcctgagaaaaaaaaagatgatgaTGGAGAGGAAACAAAAGAATCCAAATCTAAAGTATCTCAATGGCGAAAGGGTGATagcaataagaaaaaagtcaGATATTGTTATAGAAGTGTAAATCAAGTTTTGGAAGATGGGAAACTGAAACCTAATAAGAAACTTCCAGTGTCAAGCGATATGAGTAGAGTTAAAGTTATCGATATGACAGGACCAGAACAAAGAATTCTTAGTGGATATCATGCAATAGCTGGTGGTCAGCAGTGTCCTGATGAGACTGTAATTACGTCTGATAAGAAATCTAAAGTGAACTTTGCCCTGCCTGAACTGCagcataatttaaatttacttgtaGATATGTGCGAGCAagatattgttcaaaatgaTCGACGAATGAGACATTTAAATGATAGAGTAATTGCTTTAGAcgcagaaaaaaagaatttatccaAAATCGTGGAGCAACATGGTCAACTTATTGATACTTTGGATAACGtgcttataattatagataagtTAATGAATGAAACGAACGAATTGTCGTTGCAAGAAATTGCAGAggctttcaaaaatttacaaaacaattattatgaaGAATACAAAATGTACGAACTTGGTGAATTAGCTAGCAGTTTTGTGGCACCGAAAATAAAGGATTGTTTGCTCAATTGGAATCCATCAATGCAACCAAAacaaccaattaaattatttgaacagtGGAAGGATATCTTGGAGAATGGAACTAGTACAACATTGcttaagatatatgtataataatttaaagtaaatcaAAAAAAGgatgtaagaaaatattcacattttattatgatacacatctgtaaaaatctataacAGTGGACATGTAGACAGCCTGAGcctttaattgaattaatagaATACTGGATGCCATTATTACCCAATtggattttagaaaatatattagatttacTAGTATTACCAAAATTAACACTAGAAGTTGAAGAATGGAATCCTCTTACTGATACTGTACCTATTCATACATGGATTCATCCTTGGTTGCCattattacgAAATCGTTTAGATACTTTGATTTATCCAATAATACGTAGAAAACTCGGATCTGCATTAGGAGGTTGGCATCCATCAGATAGAGCCGCTAGATTAATGTTGCAACCATGGACAGAAGTGTTTGCTAAAGGAGACATGGAAGCATTTTTAGTCAAAAACATTATTCCAAAATTGCAAATAGCCTTATCCGAGTTTGTTATAAATCCACATCAACAGCACTTAGATCAATGGAATTGGGTGTATGAATGGAGGGAATTAATCCCTGTTCATATCATGGCAGGATTGCttgataaattctttttcccAAAATGGCTACAAGTTTTAGCACTTTGGCTCAATCATTCGCCTAATTATGATCAAGTAACAATTTGATACATGAGTTGGAAAGGGATGTTAAATGACAAGTTACTAGCGGAACCAGTAATAAAAGAGCATTTTAAGAAGGCATTGGACATGATGAATAGGGCTGTCAGTGGGCCACAAACGCATCAACCTGGTGCAATGGAACAAGTTTCATATTTAACAAGCTTAGAGAGAACTCAGCCGACAATATCGCAGGTGGCACCGATTGCACAGCCGAGAATGGAGAGACTCGCAGAGGCAGTACGAACAGCTTCACAAATACTGCAAGGTTTCAAAGATTTCGTACAAAAGAAGTGTGAAGAAAgaggtatattatttatgccgATCCCGAATAGATATAAGGAGGCTAAGCAAGTGTACAAAGTGGGCAATGTTCAGGTTTACATCAACAGCAATGTTTTATTTGTATGTCACAATGGTACAAATTGGATGCCAACTCATTTGAATGCCTTGCTGGATATGTCTgaactttaa
- Protein Sequence
- MSEDEVESFEVTDYDLDNEFNFACPRRKLSKKQQMLGIWADDSDEDELSTRPSFKTFNKGPKNYTAPVNFVAGGIQQAGQPKEKEAKDDEEDEEETQDSQTKHSSSSSEDERSNNSKSRPSFSLNLDSDIAGLRKKRHQVNPLLLKSGMGSWEVHTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEAHLRKGRGAIGAYGPEKTPKIPEKKKDDDGEETKESKSKVSQWRKGDSNKKKVRYCYRSVNQVLEDGKLKPNKKLPVSSDMSRVKVIDMTGPEQRILSGYHAIAGGQQCPDETVITSDKKSKVNFALPELQHNLNLLVDMCEQDIVQNDRRMRHLNDRVIALDAEKKNLSKIVEQHGQLIDTLDNVLIIIDKLMNETNELSLQEIAEAFKNLQNNYYEEYKMYELGELASSFVAPKIKDCLLNWNPSMQPKQPIKLFEQWKDILENGTSTTLLKIYV**FKVNQKKDVRKYSHFIMIHICKNL*QWTCRQPEPLIELIEYWMPLLPNWILENILDLLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYPIIRRKLGSALGGWHPSDRAARLMLQPWTEVFAKGDMEAFLVKNIIPKLQIALSEFVINPHQQHLDQWNWVYEWRELIPVHIMAGLLDKFFFPKWLQVLALWLNHSPNYDQVTI*YMSWKGMLNDKLLAEPVIKEHFKKALDMMNRAVSGPQTHQPGAMEQVSYLTSLERTQPTISQVAPIAQPRMERLAEAVRTASQILQGFKDFVQKKCEERGILFMPIPNRYKEAKQVYKVGNVQVYINSNVLFVCHNGTNWMPTHLNALLDMSEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00898736;
- 90% Identity
- iTF_01421552;
- 80% Identity
- -