Tsep009381.1
Basic Information
- Insect
- Trachymyrmex septentrionalis
- Gene Symbol
- tfip11
- Assembly
- GCA_001594115.1
- Location
- NW:430555-435678[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-102 2.2e-98 328.5 17.9 1 275 389 657 389 657 0.98 2 2 0.012 66 2.2 0.1 245 272 672 699 663 702 0.86
Sequence Information
- Coding Sequence
- ATGTCTGAAGATGAAGTGGAAAGCTTTGAAGTTACTGATTATGATTTGGATAATGAATTTAACATCGCTCGCCCCCGACGCAAACTGACGAAGAAACAACAAATGCTAGGAATATGGGCAGATGATAGTGATGAGGATGAATTATCTGCCAGACCATCTTTTAAGACTTTTAACAAGGGTCCTAAGAATTATACAGCACCAGTTAATTTCGTCGCTGGTGGTATCCAACAAGCAGGACAACCAAAAGAGAAGGAGGCTAAAGATGATGAAGAAGACGATGAGGAGACCAGGGATTCTCAAATAAAGAACAGTAGCTCGAGttCGGAAGATGAGAGATCAAGTAATTCAAAATCACGTCCATCCTTCTCTTTGAATTTGGACAGCGACATTGCAGGTTTACGTAAAAAGCGCCATCAAGTGAATCCCTTATTGCTGAAAAGTGGAATGGGTAGTTGGGAAGTGCATACAAAGGGCATTGGTGCTAAATTATTGCTACAGatggGATTTGAACCTGGTAAGGGCTTAGGTAAACAACTACAAGGAATAAGTGCACCAGTAGAAGCACATCTCAGAAAAGGAAGGGGTGCAATAGGTGCATATGGCCCAGAAAAAACACCAAAGATTcctgagaaaaagaaagatgatGATGGGGAGGAAACAAAAGAACTCAAATCTAAAGTATCTCAATGGCGGAAGGGTGATAGCAACAAGAAAAAAGTCAGATATTGTTATAGAAGTGTAGATCAAGTTTTGGAAGATGGAAAACTTAAACCTAATAAAAAACTTCCAGTGTCAAGCGATATGAGTAGAGTTAAAGTTATTGATATGACAGGACCAGAACAAAGAATTCTTAGTGGATACCACGCAATAGCTGGTGGTCAGCAGTGTCCTGATGAGACTGTAATTACGTCTGATAAGAAATCTAAAGTGAACTTTGCCCTGCCTGAATTGcagcataatttaaatttacttgtaGATATGTGCGAGCaagatattattcaaaatgatcGACGAATGAGACATTTAAATGATAGAGTAATTGCTTTAGaagcagaaaaaaagaatttaactaAAGTTGTGGATCAACATAGTCAACTTATTGATACTTTGGAAAATGTACTTGTTATTGTAGATAAGTTAATGAATGAAACGAACGAATTGTCATTGCAAGAAACTGCAGaggctttcaaaaatttacaaaacaattattatgaaGAGTACAAGATGTACGAACTTGGTGAATTAGCTAGTAGTTTCGTGGCACCGAAAATAAAGGATTGTTTGCTTAATTGGAATCCATTAATACAACCAAAACAaccgattaaattatttgaacaatGGAAGGATATCTTGGAGAATGGAACTAGTACGACATTACAGACACGGACTATGCAGTCATATGATCAACTAGTATGGAATGCATGGATGCCATCAGTTAGAGGAGCCATAcaACAGTGGACATGTAGGCAACCTGAGcctttaattgaattaatagaATACTGGATGCCATTATTACCCAATtggattttagaaaatatattagactTACTAGTGTTACCAAAATTAACATTGGAAGTTGAAGAATGGAATCCTCTTACCGATACTGTACCTATTCATACATGGATCCATCCTTGGTTGCCGTTATTACgAAATCGTTTAGATACTTTGATTTATCCAATAATACGTAGAAAACTCGGATCTGCATTAGGAGGTTGGCATCCATCAGATAGATCCGCTAGATTAATGTTGCAACCATGGGCAGAAGTATTTGCTAAAGGAGATATGGAAGCATTTTTAGTCAAGAACATTATTCCAAAATTGCAAATAGCCTTAACCGAGTTTGTTATAAATCCACATCAACAGCACTTAGATCAATGGAATTGGGTATATGAATGGAAGGAATTAATACCGGTTCATATAATGACAGGATTACttgataaattctttttcccAAAATGGCTACAAGTTTTAGCACTTTGGCTCAATCATTCGCCTAATTATGATCAAGTAACAACTTGGTACATGGGTTGGAAAGGGATGTTAAATGACAAGTTATTAGCAGAACCAGTAATAAAAGAGCATTTTAAGAAAGCATTGGACATGATGAATAGAGCTGTCAGTGGGCCACAAACTCATCAACCTGGCGCAATAGAACAAGTTTCATATTTAACAAGCTTAGAAAGAACTCAGCCAACAATATCGCAGGTGGCACCGATTGCGCAGCCGAGAATGGAGAGACTCGCAGAGGCAGTACGAACAGCTTCACAAATACCGCAGGGTTTCAAGGATTTCGTACAAAAGAAGTGCGAAGAGAGAGGGATATTATTTATGCCGATCCCGAATAGATATAAGGAGGCTAAGCAAGTGTACAAAGTGGGCAATGTTCAGGCTTACATTGACAGCAATGTCTTATTTTGccggacgaaacatggatacATCACTACACTCCAGAGTCGAAGCGGCAGTCATCTGAGTGGCGCACAGCTTGCGAAAGCCGTCCGAAACGCCCGAAAACGCAGCAGTCAGCTGGCAAAGTCATGGCGTCAGTTTTTTGGGATACGCATGGCGTGA
- Protein Sequence
- MSEDEVESFEVTDYDLDNEFNIARPRRKLTKKQQMLGIWADDSDEDELSARPSFKTFNKGPKNYTAPVNFVAGGIQQAGQPKEKEAKDDEEDDEETRDSQIKNSSSSSEDERSSNSKSRPSFSLNLDSDIAGLRKKRHQVNPLLLKSGMGSWEVHTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEAHLRKGRGAIGAYGPEKTPKIPEKKKDDDGEETKELKSKVSQWRKGDSNKKKVRYCYRSVDQVLEDGKLKPNKKLPVSSDMSRVKVIDMTGPEQRILSGYHAIAGGQQCPDETVITSDKKSKVNFALPELQHNLNLLVDMCEQDIIQNDRRMRHLNDRVIALEAEKKNLTKVVDQHSQLIDTLENVLVIVDKLMNETNELSLQETAEAFKNLQNNYYEEYKMYELGELASSFVAPKIKDCLLNWNPLIQPKQPIKLFEQWKDILENGTSTTLQTRTMQSYDQLVWNAWMPSVRGAIQQWTCRQPEPLIELIEYWMPLLPNWILENILDLLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWAEVFAKGDMEAFLVKNIIPKLQIALTEFVINPHQQHLDQWNWVYEWKELIPVHIMTGLLDKFFFPKWLQVLALWLNHSPNYDQVTTWYMGWKGMLNDKLLAEPVIKEHFKKALDMMNRAVSGPQTHQPGAIEQVSYLTSLERTQPTISQVAPIAQPRMERLAEAVRTASQIPQGFKDFVQKKCEERGILFMPIPNRYKEAKQVYKVGNVQAYIDSNVLFCRTKHGYITTLQSRSGSHLSGAQLAKAVRNARKRSSQLAKSWRQFFGIRMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00898736;
- 90% Identity
- iTF_01421552;
- 80% Identity
- -