Basic Information

Insect: Tipula vernalis
Gene Symbol: hang
Assembly: GCA_958295665.1
Location: OY282560.1:367153497-367159561[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.0006 0.33 14.8 0.4 3 23 273 294 272 294 0.96

2 24 5.9 3.3e+03 2.2 1.3 6 22 371 387 367 387 0.90

3 24 0.073 40 8.2 0.7 3 21 397 415 396 416 0.95

4 24 0.031 17 9.4 0.5 3 23 458 479 456 479 0.90

5 24 5.6 3.1e+03 2.3 0.2 3 20 493 510 491 512 0.91

6 24 0.034 19 9.3 1.1 3 23 521 542 519 542 0.94

7 24 0.0013 0.73 13.7 0.4 3 23 577 598 575 598 0.95

8 24 1.9e-05 0.01 19.5 1.2 1 23 606 629 606 629 0.96

9 24 0.095 53 7.8 0.2 2 23 655 676 654 676 0.96

10 24 0.0021 1.2 13.1 0.6 1 23 679 701 679 701 0.98

11 24 0.00075 0.42 14.5 1.3 1 23 707 730 707 730 0.98

12 24 0.049 27 8.7 0.2 2 23 816 837 816 837 0.97

13 24 0.027 15 9.6 0.9 2 23 864 886 863 886 0.94

14 24 0.027 15 9.6 2.5 2 23 895 917 892 917 0.96

15 24 0.0096 5.3 11.0 6.8 1 19 944 962 944 967 0.91

16 24 0.0031 1.7 12.5 1.1 1 23 1003 1025 1003 1025 0.99

17 24 0.001 0.57 14.0 1.2 1 23 1033 1056 1033 1056 0.93

18 24 5.7e-05 0.032 18.0 1.1 2 23 1064 1085 1063 1085 0.97

19 24 0.00097 0.54 14.1 2.3 1 23 1113 1135 1113 1135 0.98

20 24 0.043 24 8.9 0.1 1 23 1187 1209 1187 1209 0.92

21 24 0.00099 0.55 14.1 0.3 2 23 1247 1269 1247 1269 0.91

22 24 0.35 2e+02 6.0 0.5 2 23 1294 1315 1293 1315 0.95

23 24 6.9e-06 0.0038 20.9 0.7 3 23 1329 1349 1329 1349 0.99

24 24 0.00043 0.24 15.2 0.4 2 23 1434 1455 1433 1455 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.0006	0.33	14.8	0.4	3	23	273	294	272	294	0.96
2	24	5.9	3.3e+03	2.2	1.3	6	22	371	387	367	387	0.90
3	24	0.073	40	8.2	0.7	3	21	397	415	396	416	0.95
4	24	0.031	17	9.4	0.5	3	23	458	479	456	479	0.90
5	24	5.6	3.1e+03	2.3	0.2	3	20	493	510	491	512	0.91
6	24	0.034	19	9.3	1.1	3	23	521	542	519	542	0.94
7	24	0.0013	0.73	13.7	0.4	3	23	577	598	575	598	0.95
8	24	1.9e-05	0.01	19.5	1.2	1	23	606	629	606	629	0.96
9	24	0.095	53	7.8	0.2	2	23	655	676	654	676	0.96
10	24	0.0021	1.2	13.1	0.6	1	23	679	701	679	701	0.98
11	24	0.00075	0.42	14.5	1.3	1	23	707	730	707	730	0.98
12	24	0.049	27	8.7	0.2	2	23	816	837	816	837	0.97
13	24	0.027	15	9.6	0.9	2	23	864	886	863	886	0.94
14	24	0.027	15	9.6	2.5	2	23	895	917	892	917	0.96
15	24	0.0096	5.3	11.0	6.8	1	19	944	962	944	967	0.91
16	24	0.0031	1.7	12.5	1.1	1	23	1003	1025	1003	1025	0.99
17	24	0.001	0.57	14.0	1.2	1	23	1033	1056	1033	1056	0.93
18	24	5.7e-05	0.032	18.0	1.1	2	23	1064	1085	1063	1085	0.97
19	24	0.00097	0.54	14.1	2.3	1	23	1113	1135	1113	1135	0.98
20	24	0.043	24	8.9	0.1	1	23	1187	1209	1187	1209	0.92
21	24	0.00099	0.55	14.1	0.3	2	23	1247	1269	1247	1269	0.91
22	24	0.35	2e+02	6.0	0.5	2	23	1294	1315	1293	1315	0.95
23	24	6.9e-06	0.0038	20.9	0.7	3	23	1329	1349	1329	1349	0.99
24	24	0.00043	0.24	15.2	0.4	2	23	1434	1455	1433	1455	0.95

Sequence Information

Coding Sequence: ATGGATAATAGTGAAATTACAATATCAAATAGACAAATTTGTTGTCGTCTATGTTTGGCACCAGATAATGAATGTGTTCCCATTTTTACAAATTCGGCAGCTGATAAAGAACCATTATCATCAAAAATTCAAGCTTGTGTTAATATTaaggttCATGAAACCGACAGACTATCATCACGAATCTGTCATTATTGTATAAGTTATTTGAATTCCTGGCAAAGCTTCAAAAATCGATGTTTGGCTGCACAGAAAAAGCAAAGaacattgttatttttattatcggAGAAGCAAAAATTTCAAAGACAGCATGCAGCGACACAGGCAGCCACCATAGCAAGGCGACAACTGCAGCATCAATTAcagagaaatttattaaattttgttgccaaCAAAGATGGTGGTGGTGGTATCCAAAACGAGGTTCAAGACGAGGATAGAAATAATTCAACGAATCAGATAAAGAATAATGACGACGTTGATCTAACCTGTGTCAAAGAGGAACCACAAGAAATGATATCAGACGATGAAgatcaAAATAATATGAATGTAGAACTAGATCCGTCACAATTTTTAGCAAATAACgaggatgatgatgattatCAAGCGTATGATGAACGTGAGCCAGTTCCTGCACCTATAATATCAATGGAGGAAGGCCCACCTATATTAACTTCTCTCGGACTTACTCACGTAAATCATGTAAATTCTTGCAATTTTGTGaaAACTGAAGCTGATTACGGTGACGATCTAACAAATTCTGGCGAACTATACAACTCATTCAACGATCAAAAATTAGGGGGACCAATACCCGGCGCTTGTTCAATTTGtgacatgaaattttcaaatcgtGCGAACGCACGGCGACATGAGCGTAACATACATGGTATATTACCGAACCCGCTAACATTTACACCACAAATTTCCAATCCTACCACAGTAAATCCCGCTGCCGTTAAACCAGTAATTAGCCGCAAAGTTATTCATGTTCCTGAAGTCTATAATTATGAAACTCCTGAAAAATATCGGCAGTATTTAACAGAAAATAAGATCAAATTTAttcgtaataatttaacatttcttgAACAATATCAAGATATGATATGCGCGTGTTGCGACCGACAATACCAAACTTATAAAGCATTTATGTCTCACAtgagaaaaaaatatcaatttttaccacgaaatttatgttttaaatgtttaaaacaatttgaaacCAAAGGACAATTTAttgcacatttaaaaaaaagaaattgtattaatttatataaattgtatatgATTGATGAATCAATAACGAAACCAGAATTAACCGAAGAAGAAAAGGCTCGTAATAAAACCAAAGATATTCTTGCAAATAAAGACTATGGATGCAAGTTGTGTGGATTaacttttaagttaaaaatggatTTTCGTGCACATGTATTTGAGCAGCATGCTGATAATCAAAAAGGGAATGACGTAGCATTAACTATATGTGGATTTTGCAATGTAAAATTCGAAGATGCCCCTACCAAAAAAAGACATTATACCAATTTAGAATGTATCATTTCGATTATATGTGGCTCATGTGGTGAGAAATTTACTCAGCATCCACATTACATTGATCACGTATATACAAATCATTTATCGAATGCAAATGCAAATGATTTTAACGAAGCTGATTCTTATGACGGTGAATTTGAAACATCATATCAATCAACATCACGTTTGCGAACTCCACAAAATTGTGCTGTTTGTGggaaacaatacaataattattataatgtaTTACGCCACATGGAAAGTAAACATCCAGATCAATTACCACAAACCTATTCATGTGAACATTGTCAAACTGGATTTCCGCGGCAGTCTGAACTACGcgaacatataaaattaaatcatcgcGACAGTTTATTTCGGACACCAacatcatcggcaaatgtaTCTGTAAGCGGCGGTATAAAACAATCAATAATTTCATGTAATGATTGTGGTTTAGTATGTGAGACGAGAGATATCTGGATTGAACACATGACAActcattcaaaatttgtatgtcCACAATGTGAATATAAAACGGAATCGAAAGAAGAATACAACAATCATTTGAgtacacatttaaaatttaagttatacTCTTGCGTAATATGTAAGCAttcttttaataatgaaaaaggaTTAGATTTACACATGAAGACAATACATAACCAAAATGCAGACGATGAATTGGGAAGTAATGAGCATAGTGATGAATGCAAAGACAATGACACGTTGCAGGTGTCAGTTAAACGAGAAATGATTGATGAAATGGACGtgtcaattaataataatgacaatGATAacgataatgatgatgatattgACAATACTTTGGAGGAAAATTCAAATATGGGCGATTCCATTCAGCCCAGtgataatgacaatacaaaTGGTGGTACACAATCGCCACCAAAACAACGTGAATGCCCGATTTGTAAATCGATTTTCAATGCTGGTGTATCATTTTCAAACCATATGCGAACTCATATGGTATCGTCACCTCACCAAAATTTTTTACGTACCCTAAATGTATCGGGACAGCCCATTGTAAAGCCATCACGAATGCGTTGTCGTTTGTGCCAAAAAAGGATCAATACTAAATTGGGACTGAAGCGACATATGCTGCTGGCACATCAAATACGTGATTATACTTGTGTTAAATGTTATATGTGTCCAGCTGAATTCAGCAGTCATAAAGGACTGAGGGTTCATTTATTGAAATCACATCAAATCACTAAGGCTGAGGATGATTCAAATACGATGGATGGcggtttaaaaatcaaaacggaaacgccgacaaataattttgaatgtcaTATTTGCCATATAgtgtacaaaaataaagatgATTTGAAACATCATTGTTCATCTGTACATGGATTTGAgctGCCAACAGAAGACGTTGACTCGAAAGATAATCTATTGGATGAAGTCACAttgaacgaaacaaaaaaagaagacTCATTTGAAAGGGATTATTGGTATCAATGCCGTTATTGTGTGGACACTTTTAATTCTGGAAAACAATTGACTGTTCACATGAATACACATGAAGAACAATATCCGACTGATTATTCATGTAAAGATTGTGGAAATGTTTATAATACAAGGAAGTCACTGTGGGTTCATCGATATAATAAACATCCACGGCCGCCAAATCCGACTGTCTGCGAAATTTGCAAAAAGGTGTTCTTcgataaaacagaattattctaTCATTTAAAAACACATTCACAGTCTAATACAAATACCGCAAGTCTGcaaacgaatttaaaattttcatctcCATCAACTACAAACCAGCCAGGTAAATATGCATGCCACGTTTGTGGTCAGAAATTCCATGAAAAGGGTCCACTTAGCAAACATATTAAAATGCACGAATTGGAGAATAATTCGTTTGGCGGTAATCCTCTAATGTCAATGTTTGATGAAGGTGGTTCAACGAGTGGGGGAAATAATGGTAACGATTATGATAGCGGGAATGATATTAAGACACAGTTTCAAGAACAAATACGTATGGTGAATGGTGAATATGCTTGTGATTTATGTCCAAAAacgtttccaattttaaatgcgCTTCATGTACATAGAGGATGGCATTTTCGATCGCCGAGTGGCAGGCAAGTAACAGATCCTAGTCAAACCTGGCAGCCTGATAGTATTCCACCTTCAAAATTGCGAAGAATGCGGAACCCTTACGGCCAACCGCCAACGTGTCCGTATTGTAGCTCAACGTTTGCCAGTACAAACAACCTGCGAAGACATATAGTCGAGGTTCATAAGCGGAATGAAGCAAAATTAATGCGTGAAAGTGCGAGTGATAATGCCGGGTTTTATGttgagaaaataaaggaatgtCGATCGTGTAACATGTCATTTAATACAACAACGGAATGGATTGATCATAAAATTATCCATGCGCGAAATCAAAAACCATCAACGACGTTCGAATGGGGCTGTGAAATATGTGGCAAAATGTTCACCCGCAAAGAACGACTACTGCAACATATGATAACACATTTAAATAGTCGAGAATTTGATGAGGATGGTAATTTTACTAATACCGGTGGTGACGGAACAAATGAAAATTCTATGGAACCATCGCAAATGGGTagtgaattaaattttgaaagtaattCCCAAAGTTCGCAGAGTTCAATGTCTTCGTCATCGAACGAACAAAATAATGATGACcaaaatgatgataatgataattatGATCAGGATGAGATGATGTCTGAACCGGATAATTCTGAACTTCCCGAAAGTTTATCGTGTGAATTGTGTCAAAAAAGGTTTACATCTACTGCAGCGCTTCGTGAGCACATATCAAATCATATTTTGAATGGTAATTTACAGTCAGATCCGACTGAATCTTCTCAAAAATCAAATGAACAGGATGTGCAACAatcttctaataatttttgtcaaatatcaaatatgttttaa
Protein Sequence: MDNSEITISNRQICCRLCLAPDNECVPIFTNSAADKEPLSSKIQACVNIKVHETDRLSSRICHYCISYLNSWQSFKNRCLAAQKKQRTLLFLLSEKQKFQRQHAATQAATIARRQLQHQLQRNLLNFVANKDGGGGIQNEVQDEDRNNSTNQIKNNDDVDLTCVKEEPQEMISDDEDQNNMNVELDPSQFLANNEDDDDYQAYDEREPVPAPIISMEEGPPILTSLGLTHVNHVNSCNFVKTEADYGDDLTNSGELYNSFNDQKLGGPIPGACSICDMKFSNRANARRHERNIHGILPNPLTFTPQISNPTTVNPAAVKPVISRKVIHVPEVYNYETPEKYRQYLTENKIKFIRNNLTFLEQYQDMICACCDRQYQTYKAFMSHMRKKYQFLPRNLCFKCLKQFETKGQFIAHLKKRNCINLYKLYMIDESITKPELTEEEKARNKTKDILANKDYGCKLCGLTFKLKMDFRAHVFEQHADNQKGNDVALTICGFCNVKFEDAPTKKRHYTNLECIISIICGSCGEKFTQHPHYIDHVYTNHLSNANANDFNEADSYDGEFETSYQSTSRLRTPQNCAVCGKQYNNYYNVLRHMESKHPDQLPQTYSCEHCQTGFPRQSELREHIKLNHRDSLFRTPTSSANVSVSGGIKQSIISCNDCGLVCETRDIWIEHMTTHSKFVCPQCEYKTESKEEYNNHLSTHLKFKLYSCVICKHSFNNEKGLDLHMKTIHNQNADDELGSNEHSDECKDNDTLQVSVKREMIDEMDVSINNNDNDNDNDDDIDNTLEENSNMGDSIQPSDNDNTNGGTQSPPKQRECPICKSIFNAGVSFSNHMRTHMVSSPHQNFLRTLNVSGQPIVKPSRMRCRLCQKRINTKLGLKRHMLLAHQIRDYTCVKCYMCPAEFSSHKGLRVHLLKSHQITKAEDDSNTMDGGLKIKTETPTNNFECHICHIVYKNKDDLKHHCSSVHGFELPTEDVDSKDNLLDEVTLNETKKEDSFERDYWYQCRYCVDTFNSGKQLTVHMNTHEEQYPTDYSCKDCGNVYNTRKSLWVHRYNKHPRPPNPTVCEICKKVFFDKTELFYHLKTHSQSNTNTASLQTNLKFSSPSTTNQPGKYACHVCGQKFHEKGPLSKHIKMHELENNSFGGNPLMSMFDEGGSTSGGNNGNDYDSGNDIKTQFQEQIRMVNGEYACDLCPKTFPILNALHVHRGWHFRSPSGRQVTDPSQTWQPDSIPPSKLRRMRNPYGQPPTCPYCSSTFASTNNLRRHIVEVHKRNEAKLMRESASDNAGFYVEKIKECRSCNMSFNTTTEWIDHKIIHARNQKPSTTFEWGCEICGKMFTRKERLLQHMITHLNSREFDEDGNFTNTGGDGTNENSMEPSQMGSELNFESNSQSSQSSMSSSSNEQNNDDQNDDNDNYDQDEMMSEPDNSELPESLSCELCQKRFTSTAALREHISNHILNGNLQSDPTESSQKSNEQDVQQSSNNFCQISNMF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01053665; iTF_01054593; iTF_01457764; iTF_01052503; iTF_01455067; iTF_01456671; iTF_01458849;
90% Identity: iTF_01052503;
80% Identity: -