Basic Information

Insect: Tipula confusa
Gene Symbol: hang
Assembly: GCA_963556175.1
Location: OY744477.1:180158671-180164660[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.00053 0.079 14.8 0.4 3 23 272 293 271 293 0.96

2 24 5.2 7.7e+02 2.2 1.3 6 22 370 386 366 386 0.90

3 24 0.064 9.5 8.2 0.7 3 21 396 414 395 415 0.95

4 24 0.027 4 9.4 0.5 3 23 457 478 455 478 0.90

5 24 4.9 7.3e+02 2.3 0.2 3 20 492 509 490 511 0.91

6 24 0.029 4.4 9.3 1.1 3 23 520 541 518 541 0.94

7 24 0.0012 0.17 13.7 0.4 3 23 576 597 574 597 0.95

8 24 1.7e-05 0.0025 19.5 1.2 1 23 605 628 605 628 0.96

9 24 0.0093 1.4 10.8 0.1 2 23 654 675 653 675 0.97

10 24 0.0043 0.65 11.9 0.5 1 23 678 700 678 700 0.98

11 24 0.00066 0.098 14.5 1.3 1 23 706 729 706 729 0.98

12 24 0.043 6.4 8.7 0.2 2 23 813 834 813 834 0.97

13 24 0.024 3.5 9.6 0.9 2 23 861 883 860 883 0.94

14 24 0.0098 1.5 10.8 2.1 2 23 892 914 889 914 0.96

15 24 0.0028 0.41 12.5 5.0 1 19 941 959 941 964 0.91

16 24 0.0065 0.97 11.3 0.9 1 23 999 1021 999 1021 0.99

17 24 0.00091 0.14 14.0 1.2 1 23 1029 1052 1029 1052 0.93

18 24 0.00092 0.14 14.0 1.3 2 23 1060 1081 1059 1081 0.97

19 24 0.00085 0.13 14.1 2.3 1 23 1109 1131 1109 1131 0.98

20 24 0.038 5.6 8.9 0.1 1 23 1185 1207 1185 1207 0.92

21 24 0.00087 0.13 14.1 0.3 2 23 1245 1267 1245 1267 0.91

22 24 0.31 46 6.0 0.5 2 23 1292 1313 1291 1313 0.95

23 24 6.1e-06 0.00091 20.9 0.7 3 23 1327 1347 1327 1347 0.99

24 24 0.00035 0.052 15.3 0.2 2 23 1432 1453 1431 1453 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.00053	0.079	14.8	0.4	3	23	272	293	271	293	0.96
2	24	5.2	7.7e+02	2.2	1.3	6	22	370	386	366	386	0.90
3	24	0.064	9.5	8.2	0.7	3	21	396	414	395	415	0.95
4	24	0.027	4	9.4	0.5	3	23	457	478	455	478	0.90
5	24	4.9	7.3e+02	2.3	0.2	3	20	492	509	490	511	0.91
6	24	0.029	4.4	9.3	1.1	3	23	520	541	518	541	0.94
7	24	0.0012	0.17	13.7	0.4	3	23	576	597	574	597	0.95
8	24	1.7e-05	0.0025	19.5	1.2	1	23	605	628	605	628	0.96
9	24	0.0093	1.4	10.8	0.1	2	23	654	675	653	675	0.97
10	24	0.0043	0.65	11.9	0.5	1	23	678	700	678	700	0.98
11	24	0.00066	0.098	14.5	1.3	1	23	706	729	706	729	0.98
12	24	0.043	6.4	8.7	0.2	2	23	813	834	813	834	0.97
13	24	0.024	3.5	9.6	0.9	2	23	861	883	860	883	0.94
14	24	0.0098	1.5	10.8	2.1	2	23	892	914	889	914	0.96
15	24	0.0028	0.41	12.5	5.0	1	19	941	959	941	964	0.91
16	24	0.0065	0.97	11.3	0.9	1	23	999	1021	999	1021	0.99
17	24	0.00091	0.14	14.0	1.2	1	23	1029	1052	1029	1052	0.93
18	24	0.00092	0.14	14.0	1.3	2	23	1060	1081	1059	1081	0.97
19	24	0.00085	0.13	14.1	2.3	1	23	1109	1131	1109	1131	0.98
20	24	0.038	5.6	8.9	0.1	1	23	1185	1207	1185	1207	0.92
21	24	0.00087	0.13	14.1	0.3	2	23	1245	1267	1245	1267	0.91
22	24	0.31	46	6.0	0.5	2	23	1292	1313	1291	1313	0.95
23	24	6.1e-06	0.00091	20.9	0.7	3	23	1327	1347	1327	1347	0.99
24	24	0.00035	0.052	15.3	0.2	2	23	1432	1453	1431	1453	0.96

Sequence Information

Coding Sequence: ATGGATAATAGTGAAATTACAATATCTAATAGACAAATTTGTTGTCGCCTATGTTTGGCACCAGATAATGAATGTGTTCCCATTTTTACAAATTCGGCAGCTGATAAAGAACCATTATCGTCAAAAATTCAAGCTTGTGTTAATATTaaggttcaTGATACTGATAGACTATCATCACGAATCTGTCATTATTgtataagttatttaaattcCTGGCAAAGCTTCAAAAATCGATGTTTAGCTGCACAGAAAAAGCAAAGAACatggttatttttattgtcgGAGAAAGAAAAACTGCAGAGACAACATGCAGCGACACAGGCTGCTGCTATTGCAAGGCGACAGCTACAGCATCAATTACagcgaaatttattaaattttgttgccaACAAAGATGGTGGCGGTGGAATCAAAAACGAGGTTCGAGACGAGAATAGAAATAAGTCCACGAATCAAACAAATAATGACGACGTTGACCTAAGCTGTGTCAAAGAGGAACCACATGAAATGATATCAGACGATGAAgaCCAAAATAATATGAATGTGGAACTAGATCCATCCCAATTTTTAGCAAAtaatgacgatgatgacgacTATCCCGCGTACGATGAACATGAACCTGTGCCCGCACCAATCATGTCAATGGAAGAAGGGCCACCAATTTTAACATCATTAGGACTAACACACGTAAATCATGTAAATTCTTGCAATTTTGTGaaaaatgatCCAGACTATAGTGACGATTTAACAAATCCAGGTGATCTATATAATTCATTCAATGATCAAAAATTAGGTGGACCTATTCCTGGGGCATGTTCAATCTGTgacatgaaattttcaaatcggGCAAATGCACGACGTCATGAACGTAACATTCACGGTATAGTGCCAAATCCTTTAACATTTACACCACAAATTTCCAATCCTACTACGCTAAATCCAGCTGCTGTAAAAACTGTCGTGAGCCGCAAAGTTGTTCAAGTTCCTGAAGTCTATAATTATGAAACACCTGAAAAATATCGACaatatttaacagaaaataaaattaaatttattcgaaataatttaacatttttagaacAATATCAAGATATGATATGTGCATGTTGCGATCGTCAATATCAAACGTATAAAGCATTTATGTCacatatgagaaaaaaatatcaatttttaccacgaaatttatgttttaaatgtttaaaacaatttgaaaccAAAGGACAATTTAttgcacatttaaaaaaacgaaattgtataaatttatataaattatatatgattgACGAATCAATAACCAAGCCTGAATTAACCGAAGATGAAAAGGCTCGAAATAAAACCAAAGATATTCTTGCTAATAAAGTCTATGGATGTAAATTGTGTGGACTAACgtttaaactaaaaatggaTTTTCGTGCGCATGTATTTGAACAGCATGCTGATAATCAAAAAGGAAATGATCTTTCATTAACTATTTGTGgtttttgtaatgttaaattcGAGGATGCACCAACCAAAAAAAGACATTATACCAATTTAGAATGTATAATTTCGATTATATGTGGCTCGTGTGGCGAAAAATTCACTCAACATCCACATTATATTGATCATGTATATACAAATCATTTATCAAATGCAAAtgcaaatgattttaatgaagCCGATTCGTACGACGGTGAATTTGAAACATCATATCAATCAACATCACGGTTGCGAACACCACAAAATTGTGCGGTATGTggaaaacaatataataactattataatgtGTTACGGCATATGGAAAGTAAACATCCAGATCAATTACCACAAACGTATTCATGCGAGCATTGTCAAACTGGTTTTCCGCGACAATCTGAATTACGtgaacatataaaattaaatcatcgtGATACATTATTTCGGACACCGACATCATCGACTAATGCATCACTGAGTGGTGGTACAAAATCATCAGTAATTCCATGTAACGATTGCGGTTTAGTATGTGAAACTCGAGACGTCTGGATCGAACATATGACAAcacattcaaaatttgtttgtccaCAATGTGAATATAAAACAGAATCGAAAGAagaatacaatttacatttgagtacacatttaaaatttaagttatattCTTGTGTTATATGTAAACATTcgtttaataatgaaaaaggATTAGATTTACATATGAAAACAATACATAACCAAAGTGCAGACggtgaaatagaaaataatgatCATAATAATGAATACAAAGATAGTGATATGTCACAGGTTTCAGTTAAAAGAGAAATGATCGATGAAATTGACGTATCATTAAATGACAATGATAACGATAATGATGACGATATTGATAATACATTGgaagaaaattcaaatatggGTGATTCAATTCAACCCAGTGATAATGATAATACAAATGGTGGTACCCAATCGCCACCAAAACAACGCGAATGTCCTATATGTAAATCGATATTCAATGCTGGTGTATCGTTTTCAAATCATATGCGAACTCATATGGTATCATCGCCGCATCAAAATTTTTTACGTACCCTAAATGTTTCTGGTCAACCAATTGTAAAGCCTTCACGAATGCGTTGTCGTTTATGCCAAAAAAGAATTAATACCAAATTAGGACTTAAGCGACATATGCTGTTGGCGCATCAAATACGTGATTATACGTGCGTCAAATGTTACATATGTCCGGCTGAATTTAGTAGCCATAAAGGATTGAGGGTACATTTATTGAAATCACATCAAATTACTAAGCCCGAAGAGGATTCAAATACAATGGATGGTGGTTTGCAAATCAAAAAAGAAGGATcggcaaataattttgaatgtcaCATTTGTCATATAGTGTACAAAAATAAAGATGACTTGAAAAATCATTGTTCATCGGTGCATGGATTTGAGCTgACAACAGTTGACGTTGACTCGAAAAATAATCTATTGGATGAAGACACATTGAACGAAACCAATGAAGAATCATTTGAAAGTGACTATTGGTATCAATGCCGTTATTGTGtggatacatttaattctgGAAAACTACTGACTATTCATATGAATACACATGAAGAACAATATCCGACTGATTATTCATGCAAAGATTGCGGAAATGTTTATAATACAAGAAAGTCGCTATGGGTTCACCGTTACAATAAACATCCTAGGCCGCCAAATCCTACGGTATGCGAAATTTGCAAGAAGCTTTTCTTCGACAAAACCGAATTATTCTATCATTTAAAAACGCATACACAATCAAATGCAAATGCCACAAGTCAAtcgtcaaatttaaaattttcatctccATCGACTACAAATCAGCCAGGAAAATATGCTTGTCACGTTTGTGGTCAAAAATTCCATGAAAAGGGTCCCCTTAGCAAACACATTAAAATGCacgaattagaaaataattcgtTTGGTGGCAATCCTATGTTGACAATGTTTGATGAGGGGGGTTCAACGAGCGGAGGTACTAATAATAATGGAAATGATTACGACAGTGGAAACGATATTAAGACACAGTTTCAAGAACAAATACGTATGGTAAATGGTGAATATGCTTGTGATTTATGTCCAAAAacgtttccaattttaaatgcGCTTCATGTACATAGAGGATGGCATTTTCGATCGCCGAGTGGCCGACAAGTAACTGATCCTAGTCAAACGTGGCAGCCTGATAGTATACCACCATCAAAATTGAGACGAATGCGTAATCCATATGGTCAACCACCGACATGTCCGTATTGTAGTTCAACATTTGCCAGTACAAATAATTTACGTAGACACATTGTCGAAGTACATAAGCGAAATGAAGCTAAATTAATGCGCGAAAGTGCAAGCGATAATGCTGgattttatgttgaaaaaataaaagaatgccGTTCATGTAATATGTCATTTAATACGACGACGGAATGGATTgatcataaaattattcatgCCCGTAATCAAAAACCATCAACGACATTCGAATGGGGCTGTGAAATATGTGGAAAAATGTTTACGCGCAAAGAACGACTATTGCAGCACATGATAACACATTTAAATAGTCGAGAATTTGATGAAGATGGTAATTTTACAAATACCGGTGGTGATgcaacaaatgaaaattcaatggAACCATCGCAAATGGGTAGTGAAATTAATTTCGAAAGTAATTCGCAAAGTTCACAAAGTTCAATGTCGTCGTCATCGAACGAACAAAATAACGATGAAcaaaatgatgataatgataattttgATCAGGACGAGATGATGTCGGAACCCGATAATTCTGAACTTCCCGAAGCATTAACATGTGAATtgtgtcaaaaaatatttacaaccaCGGCCGCACTTCGTGAGCATATttcaaatcatattttgaaTGGTAATTTACAATCGGATCCAACCGAATCTTCTCAAAAATCAATTGAACCAGAAATGCAACAGTCTTCgaataatttttgtcaaatatcaaatatgttTTAA
Protein Sequence: MDNSEITISNRQICCRLCLAPDNECVPIFTNSAADKEPLSSKIQACVNIKVHDTDRLSSRICHYCISYLNSWQSFKNRCLAAQKKQRTWLFLLSEKEKLQRQHAATQAAAIARRQLQHQLQRNLLNFVANKDGGGGIKNEVRDENRNKSTNQTNNDDVDLSCVKEEPHEMISDDEDQNNMNVELDPSQFLANNDDDDDYPAYDEHEPVPAPIMSMEEGPPILTSLGLTHVNHVNSCNFVKNDPDYSDDLTNPGDLYNSFNDQKLGGPIPGACSICDMKFSNRANARRHERNIHGIVPNPLTFTPQISNPTTLNPAAVKTVVSRKVVQVPEVYNYETPEKYRQYLTENKIKFIRNNLTFLEQYQDMICACCDRQYQTYKAFMSHMRKKYQFLPRNLCFKCLKQFETKGQFIAHLKKRNCINLYKLYMIDESITKPELTEDEKARNKTKDILANKVYGCKLCGLTFKLKMDFRAHVFEQHADNQKGNDLSLTICGFCNVKFEDAPTKKRHYTNLECIISIICGSCGEKFTQHPHYIDHVYTNHLSNANANDFNEADSYDGEFETSYQSTSRLRTPQNCAVCGKQYNNYYNVLRHMESKHPDQLPQTYSCEHCQTGFPRQSELREHIKLNHRDTLFRTPTSSTNASLSGGTKSSVIPCNDCGLVCETRDVWIEHMTTHSKFVCPQCEYKTESKEEYNLHLSTHLKFKLYSCVICKHSFNNEKGLDLHMKTIHNQSADGEIENNDHNNEYKDSDMSQVSVKREMIDEIDVSLNDNDNDNDDDIDNTLEENSNMGDSIQPSDNDNTNGGTQSPPKQRECPICKSIFNAGVSFSNHMRTHMVSSPHQNFLRTLNVSGQPIVKPSRMRCRLCQKRINTKLGLKRHMLLAHQIRDYTCVKCYICPAEFSSHKGLRVHLLKSHQITKPEEDSNTMDGGLQIKKEGSANNFECHICHIVYKNKDDLKNHCSSVHGFELTTVDVDSKNNLLDEDTLNETNEESFESDYWYQCRYCVDTFNSGKLLTIHMNTHEEQYPTDYSCKDCGNVYNTRKSLWVHRYNKHPRPPNPTVCEICKKLFFDKTELFYHLKTHTQSNANATSQSSNLKFSSPSTTNQPGKYACHVCGQKFHEKGPLSKHIKMHELENNSFGGNPMLTMFDEGGSTSGGTNNNGNDYDSGNDIKTQFQEQIRMVNGEYACDLCPKTFPILNALHVHRGWHFRSPSGRQVTDPSQTWQPDSIPPSKLRRMRNPYGQPPTCPYCSSTFASTNNLRRHIVEVHKRNEAKLMRESASDNAGFYVEKIKECRSCNMSFNTTTEWIDHKIIHARNQKPSTTFEWGCEICGKMFTRKERLLQHMITHLNSREFDEDGNFTNTGGDATNENSMEPSQMGSEINFESNSQSSQSSMSSSSNEQNNDEQNDDNDNFDQDEMMSEPDNSELPEALTCELCQKIFTTTAALREHISNHILNGNLQSDPTESSQKSIEPEMQQSSNNFCQISNMF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01460484;
90% Identity: iTF_01052503;
80% Identity: -