Basic Information

Insect: Tipula lateralis
Gene Symbol: hang
Assembly: GCA_963932295.1
Location: OZ010738.1:185688550-185694366[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.00051 0.066 14.8 0.4 3 23 265 286 264 286 0.96

2 24 5 6.4e+02 2.2 1.3 6 22 363 379 359 379 0.90

3 24 0.062 8 8.2 0.7 3 21 389 407 388 408 0.95

4 24 0.026 3.4 9.4 0.5 3 23 450 471 448 471 0.90

5 24 4.7 6.1e+02 2.3 0.2 3 20 485 502 483 504 0.91

6 24 0.028 3.7 9.3 1.1 3 23 513 534 511 534 0.94

7 24 0.0011 0.14 13.7 0.4 3 23 569 590 567 590 0.95

8 24 1.6e-05 0.0021 19.5 1.2 1 23 598 621 598 621 0.96

9 24 0.08 10 7.9 0.2 2 23 647 668 646 668 0.96

10 24 0.0018 0.23 13.0 0.6 1 23 671 693 671 693 0.98

11 24 0.016 2 10.1 1.3 1 23 699 722 699 722 0.96

12 24 0.041 5.4 8.8 0.2 2 23 802 823 802 823 0.97

13 24 0.023 2.9 9.6 0.9 2 23 850 872 849 872 0.94

14 24 0.023 3 9.6 2.5 2 23 881 903 878 903 0.96

15 24 0.0027 0.34 12.5 5.0 1 19 930 948 930 953 0.91

16 24 0.0026 0.34 12.5 1.1 1 23 988 1010 988 1010 0.99

17 24 0.00087 0.11 14.0 1.2 1 23 1018 1041 1018 1041 0.93

18 24 0.00088 0.11 14.0 1.3 2 23 1049 1070 1048 1070 0.97

19 24 0.00082 0.11 14.1 2.3 1 23 1098 1120 1098 1120 0.98

20 24 0.036 4.7 8.9 0.1 1 23 1173 1195 1173 1195 0.92

21 24 0.00084 0.11 14.1 0.3 2 23 1233 1255 1233 1255 0.91

22 24 0.3 39 6.1 0.5 2 23 1280 1301 1279 1301 0.95

23 24 5.9e-06 0.00076 20.9 0.7 3 23 1315 1335 1315 1335 0.99

24 24 0.00038 0.049 15.2 0.3 2 23 1418 1439 1417 1439 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.00051	0.066	14.8	0.4	3	23	265	286	264	286	0.96
2	24	5	6.4e+02	2.2	1.3	6	22	363	379	359	379	0.90
3	24	0.062	8	8.2	0.7	3	21	389	407	388	408	0.95
4	24	0.026	3.4	9.4	0.5	3	23	450	471	448	471	0.90
5	24	4.7	6.1e+02	2.3	0.2	3	20	485	502	483	504	0.91
6	24	0.028	3.7	9.3	1.1	3	23	513	534	511	534	0.94
7	24	0.0011	0.14	13.7	0.4	3	23	569	590	567	590	0.95
8	24	1.6e-05	0.0021	19.5	1.2	1	23	598	621	598	621	0.96
9	24	0.08	10	7.9	0.2	2	23	647	668	646	668	0.96
10	24	0.0018	0.23	13.0	0.6	1	23	671	693	671	693	0.98
11	24	0.016	2	10.1	1.3	1	23	699	722	699	722	0.96
12	24	0.041	5.4	8.8	0.2	2	23	802	823	802	823	0.97
13	24	0.023	2.9	9.6	0.9	2	23	850	872	849	872	0.94
14	24	0.023	3	9.6	2.5	2	23	881	903	878	903	0.96
15	24	0.0027	0.34	12.5	5.0	1	19	930	948	930	953	0.91
16	24	0.0026	0.34	12.5	1.1	1	23	988	1010	988	1010	0.99
17	24	0.00087	0.11	14.0	1.2	1	23	1018	1041	1018	1041	0.93
18	24	0.00088	0.11	14.0	1.3	2	23	1049	1070	1048	1070	0.97
19	24	0.00082	0.11	14.1	2.3	1	23	1098	1120	1098	1120	0.98
20	24	0.036	4.7	8.9	0.1	1	23	1173	1195	1173	1195	0.92
21	24	0.00084	0.11	14.1	0.3	2	23	1233	1255	1233	1255	0.91
22	24	0.3	39	6.1	0.5	2	23	1280	1301	1279	1301	0.95
23	24	5.9e-06	0.00076	20.9	0.7	3	23	1315	1335	1315	1335	0.99
24	24	0.00038	0.049	15.2	0.3	2	23	1418	1439	1417	1439	0.95

Sequence Information

Coding Sequence: ATGGATAATAGTGAAATTACAAtatcaaatagacaaatttgtTGTCGTCTATGTTTGGCACCAGATAATGAATGTGTtccaatttttacaaattcGGCAGCTGATAAAGAACCATTATCGTCAAAAATTCAAGCTTGTGTTAATATTAaggTTCATGAAACCGATAGACTATCATCAAGAATCTGTCATTATTGTATAAGTTATTTGAATTCCTGGCAAAGCTTCAAAAATCGATGTTTAGCTGCACAGAAAAAGCAACGAACATGGTTATTTTTACTGTCGGAGAAAGAAAAACTGCAGAGACAACATGCAGCGACACAGGCAGCCGCCATAGCAAGGCGACAACTACAGCATCAATTACagagaaatttattaaattttgttgccAACAAAGATGGTGGTGGAGTTCAAAACGAGGTTCGAGACGATGACAGAAACAATTCGGCGCATCAGACAAATAATAATGACGACGTTGACCTAAGCTGTGTCAAAGAGGAACCACAAGAAATGATATCGGATGATGAAgaACAAAATAACATGAATGTGGAATTAGATCCATCACAATTTTTAGCAAACAACGAGGACGATGATGATTACACACCGTATGATGAAAATGAACCTGTTCCCGCACCTATAATGTCAATGGAAGAGGGACCACCAATCTTAACATCATTAGGACTAACACACGTAAATCATaAAAATGATCCAGATTATGGAGATGATCTAACAAATCCAGGGGACTTATATAATACATTTAGTGATCAAAAATTAGGGGGCCCAATCCCCGGTGCTTGTTCAATATGTGACATGAAATTTTCGAATCGTGCAAATGCGAGACGACATGAACGTAACATTCATGGCATAGTTCCAAATCCGCTAACATTTACTCCTCAAATTTCAAATCCTACCACATTAAATTCAGCTGCCCAAAAACCGATAATAAGTCGAAAAGTTATTCAAGTTCCTGAAGTATATAATTATGAAACACCTGAAAAATATCGACAGtatttaacagaaaataaaataaaatttattcgtaataatttaacatttttagaaCAATATCAAGATATGATATGTGCTTGCTGCGATCGCCAATACCAAACTTATAAAGCATTCATGTCTCATATGAGAAAAAAGTATCAATTTTTACCacgaaatttatgttttaaatgtttaaaacaatttgaaacCAAAGGACAATTTATTgcacatttaaaaaaacgaaattgtataaatttgtataagTTATATATGATTGATGAGTCAATAACAAAACCGGAGCTAACCGAAGAAGAAAAGGCACGTAACAAAACCAAAGATATACTTGCCAATAAAGTTTACGGATGTAAATTGTGTGGACTAACGTTTAAGTTAAAAATGGATTTTCGTGCACATGTATTTGAACAGCATGCTGATAATCAAAAAGGGAATGATATATCATTAACTATTTGTGGATTTTGTAATGTTAAATTTGAGGATGCACCAACCAAAAAACGACATTATACAAATTTAGAATGCATTATTTCGATAATATGTGGCTCATGTGGTGAAAAATTCACTCAACATCCACATTATATAGATCACGTATATACAAATCATTTATCAAATGCAAATGCAAATGATTTTAATGAAGCTGATTCGTATGATGGTGAATTTGAAACATCATATCAATCTACATCACGGTTACGAACACCACAAAATTGTGCTGTGTGTGGTAAACAATACAATAACTATTATAACGTGCTGCGACACATGGAAAGCAAACATCCTGATCAATTACCGCAAACTTATTCATGTGAACATTGCCAAACTGGATTTCCACGACAATCGGAACTACGCGAACATATAAAGTTAAATCATCGTGATACTTTATTTCGGACGCCAACATCATCAACAAATGTATCACAAAGCGGAAGTTTAAAACCAACTACAATTTCGTGTAACGATTGTGGTTTGGTATGTGAGACTAGAGACATTTGGATTGAACACATGACAACtcattcaaaatttgtttgtccACAATGCGAATATAAGACAGAATCAAGAGATGAATACAACAATCATTTGAgcacacatttaaaatttaaattgtactCATGTATTATTTGTAAACATTCGTTTAATAACGAGAAAGGACTAGATCTCCACATGAAAACAATACACAATCAAACAATCGACAATGAGCTAGGAAATATTGAGGATTGTGATGAATACAAAGACAATGATATGTTACAAGTGTCAGTTAAAAGAGAAATGATAGATGATATGGATGTTTcagctaatgataatgatgatgatattgATAACACATTAGAAGAAAATTCTAATATGGGCGATTCGATTCAGCCGAGTGATACTGATAATACGAATGGTGGGACACAATCACCACCAAAGCAACGTGAATGTCCGATTTGTAAATCGATATTTAATGCAGGTGTGTCATTTTCGAACCATATGCGAACTCATATGGTATCGTCACCACATCAAAATTTTTTACGTACACTTAATGTATCAGGACAACCAATTGTAAAACCATCACGAATGCGTTGTCGTTTATGCCAAAAAAGAATCAATACCAAATTAGGTTTGAAACGACATATGTTGTTGGCACATCAAATACGTGATTATACGTGTGTCAAATGTTATATGTGCCCAGCTGAATTTAGTAGTCATAAAGGATTGAGGGTTCATTTGTTGAAATCACATCAAATTACGAAACCTGAAGAGGATTCAAATGTAGCTGAAGGCCGTGGATCAATTAAATCTGAAACATtggcaaataattttgaatgtcaCATCTGCCATATAGTGTACAAGAATAAAGATGACTTAAAAAATCATTGTTCATCAGTGCACGGATTTGAGctGCCAACAGATGACATTGACTCGAAAGATAATCTATTGGATGAAGATACATTGAACGAAACCAATGAAGAACCTTTTGAAAGTGATTATTGGTATCAATGCCGTTATTGCGTGGATACATTTAATTCTGGTAAACAATTGACTGTTCATATGAATACACATGAAGAACAATATCCGACTGATTATTCATGCAAAGATTGTGGAAATGTGTATAATACACGAAAGTCTCTGTGGGTCCATCGATATAATAAACATCCACGGCCGCCAAATCCAACTGTCtgtgaaatttgtaaaaaacttttcttcgacaaaacagaattattttatcatttaaaaaccCATACACAGTCAAGTACCAATTCGACAAGTCAGTCATCGAATTTAAAATTCTCATCTCCATCGACTATAAATCAGCCGGGTAAATATGCGTGCCATGTTTGTGGACAGAAATTCCACGAAAAAGGTCCGCTAagtaaacatattaaaatgcacgaatTAGAGAATAATTCGTTTGGTAGTAATCCTTTAATGTCAATGTTCGATGAAGGTGGTTCAACGAGTGGAGGAAATAATAACGGAAACGACTATGATAGTGGTAATGATGTTAAGACACAGTTTCAAGAACAAATACGTATGGTGAATGGTGAATATGCCTGTGATTTATGTCCaaaaacatttccaattttaaatGCTCTTCATGTACATAGAGGTTGGCATTTTCGATCGCCAAGCGGCAGACAAGTAACAGATCCCAGTCAAACATGGCAACCTGATAGTATACCACCATCAAAATTACGACGAATGCGTAATCCTTATGGTCAACCGCCAACATGTCCATACTGTAGCTCAACATTTGCcagtacaaataatttacgaAGACATATCGTTGAAGTACATAAGCGAAATGAGGCCAAATTAATGCGTGAAAGTGCAAGTGATAATGCTGGTTTCTATGTTGAAAAAATAAAGGAATGCCGATCGTGCAACATGTCATTTAATACAACGACGGAATGGATCgatcataaaattattcatgCACGAAATCAAAAACCATCAACGACATTTGAATGGGGTTGTGAAATCTGTGGTAAAATGTTTACGCGAAAAGAACGACTACTGCAGCATATGATAACACATTTGAATAGTCGTGAATTCGATGAGGATGGTAATTTTACGAATGCCGGTGGTGATGCGACAAATGAAAATTCTATGGAACCATCACAAATGGGAAGTGAATTAAATTTCGAAAGTAATTCCCAAAGTTCACAGAGTTCAATGTCTTCATCGTCGAACGAACAGAATAATGATGAACAAAACGATGATAATTATGATCAGGATGAGATGATGTCTGAGCCCGATAATTCCGAACTTCCTGAAGCTTTATCATGTGAATTGTgtcaaaaaatgtttacatcGACTGCAGCACTTCGCGAGCATATatcaaatcatattttaaatggTAATTTACAAACAGATTCGAACGATCCATCACAAAAATCAAATGAGCAAGATATGCAACAATCctctaataatttttgtcaaatatcaaatatgttttaa
Protein Sequence: MDNSEITISNRQICCRLCLAPDNECVPIFTNSAADKEPLSSKIQACVNIKVHETDRLSSRICHYCISYLNSWQSFKNRCLAAQKKQRTWLFLLSEKEKLQRQHAATQAAAIARRQLQHQLQRNLLNFVANKDGGGVQNEVRDDDRNNSAHQTNNNDDVDLSCVKEEPQEMISDDEEQNNMNVELDPSQFLANNEDDDDYTPYDENEPVPAPIMSMEEGPPILTSLGLTHVNHKNDPDYGDDLTNPGDLYNTFSDQKLGGPIPGACSICDMKFSNRANARRHERNIHGIVPNPLTFTPQISNPTTLNSAAQKPIISRKVIQVPEVYNYETPEKYRQYLTENKIKFIRNNLTFLEQYQDMICACCDRQYQTYKAFMSHMRKKYQFLPRNLCFKCLKQFETKGQFIAHLKKRNCINLYKLYMIDESITKPELTEEEKARNKTKDILANKVYGCKLCGLTFKLKMDFRAHVFEQHADNQKGNDISLTICGFCNVKFEDAPTKKRHYTNLECIISIICGSCGEKFTQHPHYIDHVYTNHLSNANANDFNEADSYDGEFETSYQSTSRLRTPQNCAVCGKQYNNYYNVLRHMESKHPDQLPQTYSCEHCQTGFPRQSELREHIKLNHRDTLFRTPTSSTNVSQSGSLKPTTISCNDCGLVCETRDIWIEHMTTHSKFVCPQCEYKTESRDEYNNHLSTHLKFKLYSCIICKHSFNNEKGLDLHMKTIHNQTIDNELGNIEDCDEYKDNDMLQVSVKREMIDDMDVSANDNDDDIDNTLEENSNMGDSIQPSDTDNTNGGTQSPPKQRECPICKSIFNAGVSFSNHMRTHMVSSPHQNFLRTLNVSGQPIVKPSRMRCRLCQKRINTKLGLKRHMLLAHQIRDYTCVKCYMCPAEFSSHKGLRVHLLKSHQITKPEEDSNVAEGRGSIKSETLANNFECHICHIVYKNKDDLKNHCSSVHGFELPTDDIDSKDNLLDEDTLNETNEEPFESDYWYQCRYCVDTFNSGKQLTVHMNTHEEQYPTDYSCKDCGNVYNTRKSLWVHRYNKHPRPPNPTVCEICKKLFFDKTELFYHLKTHTQSSTNSTSQSSNLKFSSPSTINQPGKYACHVCGQKFHEKGPLSKHIKMHELENNSFGSNPLMSMFDEGGSTSGGNNNGNDYDSGNDVKTQFQEQIRMVNGEYACDLCPKTFPILNALHVHRGWHFRSPSGRQVTDPSQTWQPDSIPPSKLRRMRNPYGQPPTCPYCSSTFASTNNLRRHIVEVHKRNEAKLMRESASDNAGFYVEKIKECRSCNMSFNTTTEWIDHKIIHARNQKPSTTFEWGCEICGKMFTRKERLLQHMITHLNSREFDEDGNFTNAGGDATNENSMEPSQMGSELNFESNSQSSQSSMSSSSNEQNNDEQNDDNYDQDEMMSEPDNSELPEALSCELCQKMFTSTAALREHISNHILNGNLQTDSNDPSQKSNEQDMQQSSNNFCQISNMF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01460484;
90% Identity: iTF_01052503;
80% Identity: -