Basic Information

Insect: Tipula lateralis
Gene Symbol: -
Assembly: GCA_963932295.1
Location: OZ010737.1:185951538-185959864[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0058 0.75 11.5 0.7 1 23 231 253 231 253 0.97

2 18 0.00019 0.025 16.1 2.8 2 23 260 282 259 282 0.96

3 18 2.1 2.7e+02 3.4 2.3 1 23 333 355 333 355 0.98

4 18 5.9e-05 0.0077 17.7 4.6 2 23 362 384 361 384 0.96

5 18 6.6e-05 0.0085 17.6 0.5 2 23 450 472 449 472 0.96

6 18 2.2 2.8e+02 3.3 0.1 2 13 1204 1215 1203 1217 0.85

7 18 0.026 3.4 9.4 0.2 1 23 1432 1454 1432 1454 0.95

8 18 0.00043 0.056 15.0 6.4 2 23 1493 1514 1492 1514 0.98

9 18 0.001 0.13 13.8 7.7 1 23 1520 1542 1520 1542 0.98

10 18 1.8e-06 0.00023 22.5 0.5 1 23 1548 1570 1548 1570 0.98

11 18 2.9e-05 0.0038 18.7 1.3 1 23 1576 1598 1576 1598 0.98

12 18 0.0047 0.61 11.7 2.8 1 23 1604 1627 1604 1627 0.97

13 18 0.026 3.4 9.4 2.2 3 23 1654 1674 1653 1674 0.99

14 18 0.0019 0.24 13.0 2.3 1 23 1678 1701 1678 1701 0.96

15 18 0.015 1.9 10.2 2.4 1 23 1707 1730 1707 1730 0.96

16 18 4.2e-06 0.00054 21.3 0.5 1 23 1737 1759 1737 1759 0.98

17 18 4.2e-05 0.0054 18.2 1.3 1 23 1765 1787 1765 1787 0.97

18 18 0.017 2.2 10.0 0.1 1 23 1793 1815 1793 1815 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0058	0.75	11.5	0.7	1	23	231	253	231	253	0.97
2	18	0.00019	0.025	16.1	2.8	2	23	260	282	259	282	0.96
3	18	2.1	2.7e+02	3.4	2.3	1	23	333	355	333	355	0.98
4	18	5.9e-05	0.0077	17.7	4.6	2	23	362	384	361	384	0.96
5	18	6.6e-05	0.0085	17.6	0.5	2	23	450	472	449	472	0.96
6	18	2.2	2.8e+02	3.3	0.1	2	13	1204	1215	1203	1217	0.85
7	18	0.026	3.4	9.4	0.2	1	23	1432	1454	1432	1454	0.95
8	18	0.00043	0.056	15.0	6.4	2	23	1493	1514	1492	1514	0.98
9	18	0.001	0.13	13.8	7.7	1	23	1520	1542	1520	1542	0.98
10	18	1.8e-06	0.00023	22.5	0.5	1	23	1548	1570	1548	1570	0.98
11	18	2.9e-05	0.0038	18.7	1.3	1	23	1576	1598	1576	1598	0.98
12	18	0.0047	0.61	11.7	2.8	1	23	1604	1627	1604	1627	0.97
13	18	0.026	3.4	9.4	2.2	3	23	1654	1674	1653	1674	0.99
14	18	0.0019	0.24	13.0	2.3	1	23	1678	1701	1678	1701	0.96
15	18	0.015	1.9	10.2	2.4	1	23	1707	1730	1707	1730	0.96
16	18	4.2e-06	0.00054	21.3	0.5	1	23	1737	1759	1737	1759	0.98
17	18	4.2e-05	0.0054	18.2	1.3	1	23	1765	1787	1765	1787	0.97
18	18	0.017	2.2	10.0	0.1	1	23	1793	1815	1793	1815	0.98

Sequence Information

Coding Sequence: ATGCAAAGGAATCCGTATTCATCCAAGGGATATATGTGGCAATCTGATCCACCAGCTTTGATAGAACCCCTAGAGTATGTCTATCGTAATCCTCTTCCATATACCACACCTGATGAGAATCGTTATCATGATGTTTGGGGCGATCCAAATATGGAACAACAGATCGTTGTCGAATCATACAAAACTCAAACCAACTATCAAGTGAATCGGGAACGAACTAAAATTCGAATTTTACCAGAAGTCAAGCCAAAGTGGAAATATATGGACATCGCAGATAAATATCGTGAGAATACAACAATCCGACGAAATAGTAATTATAGCTATAGTCAAAATCATTACCAATCATCATCGCCATTAAATTCGTCGGTTCATTCAAAAGtcataaacacaaataaaaaatgtcgtGGATGTTTAAAATCAGATAAAAGTTTTGAATTCGATGTTGATCAGCAACAGTATTTTACATCAATTAAAgtCAAACCTGATTTTACAAATTCGGCTGGCTTATGCTTTAATTGTGCCGAAGAGCTTAAGCTAGCTTATAATTTTcgtaaaaaatgtttgaaagcaaataaagattataaaactttattaagCATTAAAGATGTGCCCATGTATGAAACACCAAagccaaaatatcaaaatcatcatCAATCATTGATGGAGTATGATAAATCAAGGATCGGACCATTCGAGTGTAATCTGTGTGGCAAAATTGTTCGAACCTACAAGGGatggaaaaatcataaaatcaagCATGGTGCCGATTTGAACATCATGTGCGAAGAGTGCGGCAAAAGTTTTATGCACGAAAGCAAATTGCATATGCACATCAAAAAGGAACATTCGACGAAACGTTTTGAAATGTTCGGCCGAGATTATATGTCGATGAATATACATAACGAGTATGGTGTGTTCGAAGAtcgtgaaaatatatttttgaaatcgtTGTTTCCCGGTTCAATTGTACCATATAACACAAACGCGGTTGGGCGCTTCGAATGTGAAATATGTTGCAAAGTGATTAAATCGTTAAAAACAATGGAACTGCATCGGCAAAAACATATCAGAGAATTGGATTTGATGTGCGACGAGTGCGGTAAATGTTTTACCAATGAGCGCAAATTACATTTGCATATACGGACCAAGCATCCGAAATACGATGAAAACAGTATGGAGTACATGAATAAGGATATCTGGATATTTAAGTCGACATATTCCGATTCGACTATATTACAAAAACGTCAGTATATGGGACCATTCGAATGTGATTTGTGCTGCAAGTTGAGTAAAACGCGTGAAGATATGGAATATCATAATCAGCGGCATATGAGGGAACTCGATTTGGTGTGCGAAGAATGTGGCAAGGGCTTTTCGTACAAAGAAAAATTGGAGCTGCACAAAAAGATGAAGCATTCTCGCTTTCAGCAGGATATTGATGGCTACGGTTATGATGGCTATGGTAAATATAAAACAgGCAATCATggcaaaaagaaatttaaacttGAAGATCGCATGGAATCTGTCGACTATGGGACCAATGAATATCGATGGGATGATAAAATACAGGCGAATAATTTTGCCGCCCAAGAATATAATAATTGGGAGGCAAAATTGGAAACAAGTGATTACGATACAAGTGAGTTCACCAATAAGTGGGATGATAAGATACAGGCCAGTAATTATATGGCAAACGACTACAAATACACCGATCCAATGCCAGTCATGAACTCGTATAATACACATCAAACACCTGCAATGACCACAATGAGCACTATGAATTCTATGTCCACTATGAATAGTTACACAAATTTTCAACCTGCACCGCAACCGGCCGTTATTGCACCAAACATAATTAAACAAGAACAAACATATCCGGCTGTTGTCGCGCCAAAGAATGAGCTCAAATGGACGGacaaattaaaatcttttaCGGATAAGAATGTACTCAGTTGGCAAGATAAATTCAAATCGAATCCGTTTAGCAAGGCTGATTTTAAGCTCGATGAAAAATTGAAACCGTATATCGGAGGTGGTATTAGTACTGCTGCTACAACAATGCCggttaacaataataacaacaatatcaaTATTGGGAACAATATCAATAGTAACACAGTGAAACCTCAGTACAATGATACGGCACCAATTATGTACAATAACAACAGTATACAAAATCAACAGCAGTATGGCTACAATAATGGTATGAATGCAATGAATTCAATGAAAACGGCTTACACTAACGATTCGATAAGCAGTTATAATACGTATGGCAAAGAACCATTAAAACCGCTTAATCAATATAACTATCAGGATCCGGTTGTAAAACCAGTAGCCCAGTATAATTACCAAGAGCCTGTACAACCAACAAATCAGTATAATTATCAAGAACCGGTTAAGCCGATCAATCACTATAATTATCAGGATCCCGTGAAAACGGCTGTTCAACCAGCATACAACTATCAAGATCCAATTAAACCAAATCAGACTGCCTATAACTATCCGGAACCAGTTAAACCTGCCATTACCCCATACAATTACCAGGAACCAATCAAAACAACAACTGGATATAATTATCAAGAGCCAGCTGTTGCTACAAAACCAATCAACCAGTATAACTACCAAGAACCGTTAAAACCATATCCAAACGTTAATGTTACGAACGAGTATAATGTCACGAACGAGTATAACTATGATGATCAGACAGTGCCATACGATGATGATGTACAACACGATGACGATGACGATTATAATTATGATGATGAAGGTAATTCatacaatgatgatgatgagaatGACGATGAATACTATAATGATGATACGCATGCTACTTCGTATACGGACGTCAACACCAAGTACAATTACGAGGAAACGATGAAATCGTATATGGCTGATGCGAACGATTATAAAtttgatgataaaaataaaattgaaccaGTTGTCAAAGTGATTGaaccaattattaaaattgaggAACCGAAAAAGATAATCGAACAACCTGTTATCGTTCCACCGGTAATCGTTACGAATGGCGCCAAAATACAAACGCAAAATTCGTTTGATGATCATGACTACAACATAGACGAACATCTCGAATCATTTCCAGAAGAAGATGACGAATATAATTACGATGATGATGAAGAAATATCGAAACCAGATACATACGATCATGACGATGAGTACGACGATAAAAATGAATCGTATCCGACcgaagatgatgatgatcataTCGATCATTCGGATCATATTATGAAGGTCGATGTACCGATTGTGGAACCAAAACCAATCGATATCAAAAAGCCggatgataataaaatttcgcCAAAGGTAAGCGAATTGAAAGCAATTGCCGAAGAGGTAAAAATTGATAAGGAAATCGGTATTCGAACAACGGATACGATAAAAGAGGAGCATAAATTGGAGTCCGATCCGAATTTAAACGAAAACGATTTGAAAGAGGACGATAAATTGGAATCATACGAAGAAGGACAGGATGAAAAGTTCGAAGAAGATGTTGTATCATTCACCGAAGAGAAAAACGAGTACGATGAAGAGGATCAAATGAATCACGAGGGTGATGATAAAAAAGATATGGAACTGGAAGAGGTGCCATGTAATTATTGTGGTCAAGTATATGATAACGCGTTCGAGTGTCCATATCATCAACAagtgaAAATAGAAGAGGCTTACGATCCCGATAAACCTCGTAAATTGAGTGGTTTATGCCGCTGTTGTTTATGTACATCAGATAATCTTCATTCAATATTCAGTCAAGCAGTTTTAGATCAAGATGAAGCGGATGGTAATGTTGATGAAGAGCCCCAGAATAATCGTTGTACCGATATAACATATCTTCAAATGTTTGAAGATTGTACTGACATTAAAGTAGATAAATTGGATGGGAAGCCCACCAGTTTGTGTTCCGATTGTATCGAAGAATTGTGTGCATCGTACAGCTTTCGGTGTAAATGTATTAATTCTGAAAATGAATTAACGGTTATGGAGTTCGATGACGAACATAATGCTAATACAATGGATAGTTCGAAAGAAGAGATCCAGGTTAAAAGTGAAacaactcaattaaaaataattgctaTTGAAGAACTCgtcaaattaaatgaaactcCGGTTGATGATGAGGAGAGTTTTATGTATGAGGATCATTTAATTGAGGTTGCTGATGATGAGAATGAAAATCAAGAACATTATGAATTAAGCGCAGAAACTAATGTGGATCAAGACATTGATGAGGATGTCTCGCCCGAGGAAGATAATTTAGGTGAGGATGCGGTGTTCGAGTGTCAAGTATGTAAATCGAATTTTGAAAGTTTAAGCGAACTACAGCTGCACAACGCTATTCATAATCCCGACCGGCCGTTTAAATGTTTCgagaaaaaatgtaaacaatgCTCGTTCAAAACTCAAGAAGAACTCGATATGCATAATTTTGTGTATCACACTGTTGAAAACATAACTAAATGTGCATACTGCCATAAAGACTGTAAAACGAAAAGGGCATTAAAAGCACATATGAAAACACATTCGTCGGATCGTCCTCACAAGTGTAAAAACTGCGATAAAGCGTTCATCTTTTCCCACCATCTCAAGAATCATgaaaaaattcatgaaaatattAAGGAATTTACCTGCCCCGATTGTCAAAAGTCGTTTATCAATAAAGATCGTCTTGCTCTGCATCAACGAATACATACAGGAAAACGGCCACATAAATGTTCAACTTGTGAAAAAGCTTTTATAAGTGCATCGTCACTAAAAATACATTATGCTACGCACACAGCTGAAAAACCATTTATGTGTACTCAATGTGGAATGTGCTTTAAACTAGAAGTGTTTCTAAACACACATCTCAAAAAAGTACATTTAACGaccgaaaaaaatattcaagaagTATCAAtatcaaaaccaaaattaacGAAGTCACGAGAAGAACAGAAATTGTGCAATATATGCAATACAAAATTTGAGACAGCTATCGAATGTACTCGTCACATAAAAACACATAGCTACAAATATTGTTGCACAATTTGCAACAAACCCTTTGCACTCAAAACAAAACTCGAATCACACGTAAAAAATTCTCATTCCacaaatcttaaatatatttgtcgagtGTGCAATGCAAAATTTCATCGGCCCGATCTGCTACGATATCACTATCTCCGTAAACATGCCGATGGTAAACTACCATTTACATGTGAAATATGTGATCGAGGTTTTATCACGAATAGTGACTATAAAGTGCACGTACGTAGACATTATGGTGAGAAACCTTACGTCTGCAATTTGTGTGACAAGCGATATATTACATCGTCCGAACTGCTTCAACATAAACGTTTTCATACGGGTGAGAAACCGTATGTTTGCAATCTATGTGATAAGCCTATTGCAACAATTAATCTGCTGATGTATCACATTAAGCAGCATAATAAAGATGGAAATATCGATTCGGAGCGTTATGATCAAGAGATGAAAGCAATTGAAAGTATTGTCGATGAGCAGGTGGTAGATGAAGTTCAGCCAGAGGAGGAGGtggaaaatgattaa
Protein Sequence: MQRNPYSSKGYMWQSDPPALIEPLEYVYRNPLPYTTPDENRYHDVWGDPNMEQQIVVESYKTQTNYQVNRERTKIRILPEVKPKWKYMDIADKYRENTTIRRNSNYSYSQNHYQSSSPLNSSVHSKVINTNKKCRGCLKSDKSFEFDVDQQQYFTSIKVKPDFTNSAGLCFNCAEELKLAYNFRKKCLKANKDYKTLLSIKDVPMYETPKPKYQNHHQSLMEYDKSRIGPFECNLCGKIVRTYKGWKNHKIKHGADLNIMCEECGKSFMHESKLHMHIKKEHSTKRFEMFGRDYMSMNIHNEYGVFEDRENIFLKSLFPGSIVPYNTNAVGRFECEICCKVIKSLKTMELHRQKHIRELDLMCDECGKCFTNERKLHLHIRTKHPKYDENSMEYMNKDIWIFKSTYSDSTILQKRQYMGPFECDLCCKLSKTREDMEYHNQRHMRELDLVCEECGKGFSYKEKLELHKKMKHSRFQQDIDGYGYDGYGKYKTGNHGKKKFKLEDRMESVDYGTNEYRWDDKIQANNFAAQEYNNWEAKLETSDYDTSEFTNKWDDKIQASNYMANDYKYTDPMPVMNSYNTHQTPAMTTMSTMNSMSTMNSYTNFQPAPQPAVIAPNIIKQEQTYPAVVAPKNELKWTDKLKSFTDKNVLSWQDKFKSNPFSKADFKLDEKLKPYIGGGISTAATTMPVNNNNNNINIGNNINSNTVKPQYNDTAPIMYNNNSIQNQQQYGYNNGMNAMNSMKTAYTNDSISSYNTYGKEPLKPLNQYNYQDPVVKPVAQYNYQEPVQPTNQYNYQEPVKPINHYNYQDPVKTAVQPAYNYQDPIKPNQTAYNYPEPVKPAITPYNYQEPIKTTTGYNYQEPAVATKPINQYNYQEPLKPYPNVNVTNEYNVTNEYNYDDQTVPYDDDVQHDDDDDYNYDDEGNSYNDDDENDDEYYNDDTHATSYTDVNTKYNYEETMKSYMADANDYKFDDKNKIEPVVKVIEPIIKIEEPKKIIEQPVIVPPVIVTNGAKIQTQNSFDDHDYNIDEHLESFPEEDDEYNYDDDEEISKPDTYDHDDEYDDKNESYPTEDDDDHIDHSDHIMKVDVPIVEPKPIDIKKPDDNKISPKVSELKAIAEEVKIDKEIGIRTTDTIKEEHKLESDPNLNENDLKEDDKLESYEEGQDEKFEEDVVSFTEEKNEYDEEDQMNHEGDDKKDMELEEVPCNYCGQVYDNAFECPYHQQVKIEEAYDPDKPRKLSGLCRCCLCTSDNLHSIFSQAVLDQDEADGNVDEEPQNNRCTDITYLQMFEDCTDIKVDKLDGKPTSLCSDCIEELCASYSFRCKCINSENELTVMEFDDEHNANTMDSSKEEIQVKSETTQLKIIAIEELVKLNETPVDDEESFMYEDHLIEVADDENENQEHYELSAETNVDQDIDEDVSPEEDNLGEDAVFECQVCKSNFESLSELQLHNAIHNPDRPFKCFEKKCKQCSFKTQEELDMHNFVYHTVENITKCAYCHKDCKTKRALKAHMKTHSSDRPHKCKNCDKAFIFSHHLKNHEKIHENIKEFTCPDCQKSFINKDRLALHQRIHTGKRPHKCSTCEKAFISASSLKIHYATHTAEKPFMCTQCGMCFKLEVFLNTHLKKVHLTTEKNIQEVSISKPKLTKSREEQKLCNICNTKFETAIECTRHIKTHSYKYCCTICNKPFALKTKLESHVKNSHSTNLKYICRVCNAKFHRPDLLRYHYLRKHADGKLPFTCEICDRGFITNSDYKVHVRRHYGEKPYVCNLCDKRYITSSELLQHKRFHTGEKPYVCNLCDKPIATINLLMYHIKQHNKDGNIDSERYDQEMKAIESIVDEQVVDEVQPEEEVEND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01455088; iTF_01458872; iTF_01054618; iTF_01054619;
90% Identity: -
80% Identity: -