Basic Information

Insect: Nephrotoma guestfalica
Gene Symbol: -
Assembly: GCA_963691935.1
Location: OY829914.1:29540564-29549445[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00039 0.078 15.3 3.4 3 23 2 23 1 23 0.96

2 17 2 3.9e+02 3.6 2.3 1 23 74 96 74 96 0.98

3 17 6e-06 0.0012 21.0 2.6 2 23 103 125 102 125 0.96

4 17 6.3e-05 0.012 17.8 0.5 2 23 191 213 190 213 0.96

5 17 3.1 6.2e+02 3.0 0.1 2 13 940 951 939 953 0.85

6 17 0.014 2.7 10.5 0.5 1 23 1165 1187 1165 1187 0.94

7 17 0.00027 0.052 15.8 5.1 2 23 1226 1247 1225 1247 0.98

8 17 0.0034 0.66 12.4 7.6 1 23 1253 1275 1253 1275 0.98

9 17 3.8e-06 0.00075 21.6 0.4 1 23 1281 1303 1281 1303 0.98

10 17 6.4e-06 0.0013 20.9 1.0 1 23 1309 1331 1309 1331 0.98

11 17 0.0081 1.6 11.2 2.8 1 23 1337 1360 1337 1360 0.97

12 17 0.011 2.2 10.7 2.8 2 23 1386 1407 1385 1407 0.97

13 17 0.0025 0.5 12.7 3.3 1 23 1411 1434 1411 1434 0.96

14 17 0.29 58 6.3 2.7 1 23 1440 1463 1440 1463 0.97

15 17 1e-05 0.002 20.3 0.5 1 23 1470 1492 1470 1492 0.99

16 17 0.00055 0.11 14.8 2.2 1 23 1498 1520 1498 1520 0.94

17 17 0.043 8.4 8.9 0.1 1 23 1526 1548 1526 1548 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00039	0.078	15.3	3.4	3	23	2	23	1	23	0.96
2	17	2	3.9e+02	3.6	2.3	1	23	74	96	74	96	0.98
3	17	6e-06	0.0012	21.0	2.6	2	23	103	125	102	125	0.96
4	17	6.3e-05	0.012	17.8	0.5	2	23	191	213	190	213	0.96
5	17	3.1	6.2e+02	3.0	0.1	2	13	940	951	939	953	0.85
6	17	0.014	2.7	10.5	0.5	1	23	1165	1187	1165	1187	0.94
7	17	0.00027	0.052	15.8	5.1	2	23	1226	1247	1225	1247	0.98
8	17	0.0034	0.66	12.4	7.6	1	23	1253	1275	1253	1275	0.98
9	17	3.8e-06	0.00075	21.6	0.4	1	23	1281	1303	1281	1303	0.98
10	17	6.4e-06	0.0013	20.9	1.0	1	23	1309	1331	1309	1331	0.98
11	17	0.0081	1.6	11.2	2.8	1	23	1337	1360	1337	1360	0.97
12	17	0.011	2.2	10.7	2.8	2	23	1386	1407	1385	1407	0.97
13	17	0.0025	0.5	12.7	3.3	1	23	1411	1434	1411	1434	0.96
14	17	0.29	58	6.3	2.7	1	23	1440	1463	1440	1463	0.97
15	17	1e-05	0.002	20.3	0.5	1	23	1470	1492	1470	1492	0.99
16	17	0.00055	0.11	14.8	2.2	1	23	1498	1520	1498	1520	0.94
17	17	0.043	8.4	8.9	0.1	1	23	1526	1548	1526	1548	0.98

Sequence Information

Coding Sequence: ATGTGCGAAGAGTGCGGTAAAAGTTTTATGCATGAAAGCAAATTGCATTTGCACATCAAGAAAGAACATTCGACCaaacgtttcgaaatgtttgGTCGGGATTACATGTCAATGAATATTCAAAATGAGTATGGTGTTTTTGAAGATcgtgaaaatatatttctgaaATCGTTATTTCCCGGTTCGATTGTTCCGTATAATACAAACACGGTTGGGCGCTTCGAATGTGAAATATGTTGCAAGGTGATTAAATCACTGAAAACCATGGAATTGCATCGGCAAAAACATATTCGGGAATTGGATTTGATGTGTGACGAATGCGGTAAATGCTTTACAAACGAGCGTAAATTGAATTTGCATATTCGGACCAAGCACCCGAAATACGATGAAAATACTATGGAGTACATGAATAAAGATATCTGGATATTTAAGTCGACATATTCCGATTCAACTATATTACAAAAACGCCAATATATGGGACCATTTGAATGTGATTTGTGTTGTAAACTTAGTAAAACACGCGAAGACATGGAATATCATAATCAGCGGCATATGAGGGAACTGGATTTGGTGTGCGAAGAGTGTGGCAAAGGCTTTTCGTACAAGGAGAAATTGGAATTgcacaaaaaaatgaagcatacaCGCTATCAGCAAGATGTGGATGGCTACGGTTATCATGGAACGGGATATGGTAAACATAAAACAGgaAATCAtggtaaaaagaaatttaaacttGAAGATCGCATGGAATCGGTCGACTATGGGACCAACGACTATCGATGGGACGATAAAATTCAGGCGAACAATTTTGCAGCTCAAGAGTATAATAATTGGGAAGCAAAATTGGAAACAAGCGATTACGATACATCGGAATTCACAAATAAGTGGGATGATAAAATACAAGCCAGCAACTACATGGTAAACGATTACCAATATTCCGACCCAATGCCAATGAATTCGTATAATACGCATCAAGCACCGGCAATAACCAGCATGAGCACAATGAACTCGATGTCCGCTATGAACAGCtaccaaaattttcaaccagCACCGCAACCCGCCGTCGTTATACCTAACATAATCAAACAAGAAGAGACATATCCAGCAGCAGTAGTTGCCCCGAAGAATGAACTCAAGTGGACagataaattaaagtcatttACGGATAAGAATGTGCTCAGCtggcaagataaatttaaagCACATCAAATCAAGCTTGATGAAAAATTGAAGCCTTATATCGGAGGCGGCAGTAGTACCACTACTACATTACCGgtcaacaataataacaacaatgtgAATATCGGCAATAATATTAATAGTAACTTAATCAAAACTCAGTACACGGATTCAGTACCAATAATGTATAATAATAACAGCATACAAGGCCAATATGGTTATAATAACGGTATGAACACTATGAATACAATGAAGCAGACTTACACCAGCGATTCGATAAGCACTTATAACTCTTATGGGAAGGAACCATTAAAACCGCTTAATCAATACAACTATCAAGACCCGGTGGTTAAACCAACGGCCCAGTACAACTATCAAGAACCTGGTCAACCAGTAAACCATTATAAGTATCAGGAACCGGTTAAGCCATTAAATCAGTACAACTATCAGGAACCTGTTAATCCGGTTGCACAAGCAGCCTACAATTATCAGGACCCAGTTAAACCCGGTCAAACTGCTTATAACTACCAGGAACCCGTTAAGCCAACCACTACGGCATATAATTATCAGGATTCGATTAAAACAACTACTGGATATAATTATCAAGACCCGATTGTTACCAAACCAGCCAATCAGTATAACTATCAGGAACCTGTAAAGCCATATCCTAACGTTAACGTGACGAACGAGTATAACGTTACGAACGAGTACAACTATGATGATCAAACTGTTCCGTACGACAATGATGCACATCacgaagatgatgatgatgattataaCTACGATGATGAGGGCAATTCATACAATGATGACGATGAAAACGACGATGAATACTATAACGATGATACGAACATTACGTCTTATACGGACGTAAATGCCAAATATAATTACGAAGAAACCATGAAATCTTATATGGCCGATGCAAACGAATACAAGTTcgatgacaaaaataaaattgagccAATTGTTAAACCAATCGAACCGATTATTAAAATTGAGGAACCAAAAATGATTGTTGAGCCCACTGTAACTGTTCCACCGGCCATCGTGACGAATGGTGCTAAAATGCAAATACAAGATTCATATGAAGATCATGATTACAACCTTGATGAGCATCTTGAATCGTTTCCCGAAGAAGATGATGAATATAATTATGACGATGACGAAGAAATTTCGAAACCCGACACGTACGATCATGATGATGAGTACGATGATAAAAATGAATCATATCCAACTGAGGATGATCATTTTGAGGATGATGATCATATTGATCATGCGATGAAAGTTGATGTACCGGTAGTGGAACCAAAACCATCGATTGATGTAAAGAAACCGGATGAGAAAATATCACCAAAAATAAGCGAATTGAAAACGATTGCGGAAGAGGTGAAAATAGAGAAAGAAATCGGCGTTAAAACAGCGGATGCGATTAAAGACCAGCATAAATTAGAATCGGATTCAAATCTAAATGAAAACGATCTAAAAGAGGATGATAAATTGGAATCGTACGAAGAGGGGCAGGACGATAAATTCGAAGAGGATGTTGTATCATTTACCGAAGAGAAAAACGAGTACGACGAAGAGGATCAAATGAATCATGAGGGTGATGATAAAAAAGATATGGAACTGGAGGAGGTGCCATGTAGTTATTGTGGTCAAGTATATGATAACGCGTTTGAGTGTCCTTATCATCAGCAAGTGAAAATAGAAGAACCATTTGACCCCGATAAAACGAATAGGTTGGATGAACTGTGCCGCGGCTGTTTATGCACATCGGATAATTTACTTTCAATATTTAGTCAAGCCGTTTTGGATCACGATGAAGCGGAGAGTGATTTCGAAGAAGGCTCATCGAATACCCGAAATACTGAAGTCACatatcttaaaatgtttgaaGACTGTACCTCATTAGAAGTAGATAAAATGGATGGTAAACCAACCAGTTTGTGTTCCGATTGTATCGAGGAATTAACCGCCTCGTACAGTTTTCGAAATAAATGTATCAATTCAGATAGAGAGTTAGGTACCACAATGATTAAAGGTGAACAAGATGAAGAGGAATCAGGTTCAACTGCAGGAGAACAATCTGTCGATAAAACTGaaacaactaatttaaaaatcgttGCCATTGAGGATCTCGTAAAATTGAATGAGACTCCGATTGATGaagatgaaaattttatgtatgaGGATCATCTAATTGAGAATGAGTTACACGAggataatttcgaaataaaccCCAGGAGTAAAATACAAACAGTCGACGAGGAGGTTACATCGATTGTGGGGATAAATGTCGTAGATGATAATGTATTCGAGTGCCAAGTATGTAAATCGAATTTCTCTAATTTGGATGAACTTCAGTTGCATAATTACATTCATAATCCCGACCGACCGTTTAAATGTTTCGAGAAAAAGTGTAAACAATGCTCATTTAAAAACCAAGAAGAACTTGAAATGCATAATTTCGTGTATCACACGGCCGAAAATGACACTAAATGTGCCTACTGTAATAAGGATTGTAAAACAAAACGGGCGCTTAAATCACATATGAAGACACATTCATCCGAACGGCCCCACAAATGTAAAAGCTGCGATAAGGCGTTCATATTTTCGCATCATCTCAAGAATcacgaaaaaattcatgataaCGTTAAAGAATTTTCCTGCCCGGAATGTCAAAAGTCGTTTATAAATAAGGATCGACTAGCCCTACATCAACGTATACACACTGGAAAGAGGCCGCATAAATGCGAGACATGTGATAAAGCGTTTATAAGTGCGTCATccttaaaaattcattatgcGACCCATACAGTCGAGAAACCGTTTATGTGTACGCAATGCGGAATGTGTTTTAAActagagatttttttaaatacgcaTCTCAAAAAGGTACATTTAGAGACGCAAACTAAGGATGATTCGGAACCGTTAGTCAAATCGAAACATGCCAAATCGAAGGGCGACCAAAAATCCTGTAATATATGTAACACCAAATTTGAGACCCCGATTGAATGTACCCGACACATAAAGACGCATAGCTATAAATACTTCTGCCACATTTGCAAGAAACCATTTGCGCTTAAAACAAAGCTCGACTCGCATATGAAAAATACTCActcttctaatttaaaatacgttTGTCGCGTATGTTCGGATAAGTTCCATCGACCCGACTTGCTGCGATACCACTATCTGCGTAAACATGCTAATGGGAAATTGCCTTACACATGCGAGATTTGTGAACGTGGCTTTATAACAAATAGTGATTATAAAGTACATGTGCGTCGGCATTATGGCGAGAAACCGTTCCTTTGTAACTTTTGCGATAAGCGATACATTACTTCATCCGAGTTGTTGCAACACAAACGTTTTCATACGGGTGAGAAACCGTATGTCTGTAATTTGTGTGAGAAACCGATTGCAACCATTAATTTACTATTGTATCATATCAGGCAGCATAACAAAGATGGGAATATTGATTCGCAGCGTTTAAATCGAGAGGTGAAGGACATCGAAAGTATTGTGGACGAAGAAAACATGGATGAAATACAATCGGAGGAAATGGAAAATGATTGA
Protein Sequence: MCEECGKSFMHESKLHLHIKKEHSTKRFEMFGRDYMSMNIQNEYGVFEDRENIFLKSLFPGSIVPYNTNTVGRFECEICCKVIKSLKTMELHRQKHIRELDLMCDECGKCFTNERKLNLHIRTKHPKYDENTMEYMNKDIWIFKSTYSDSTILQKRQYMGPFECDLCCKLSKTREDMEYHNQRHMRELDLVCEECGKGFSYKEKLELHKKMKHTRYQQDVDGYGYHGTGYGKHKTGNHGKKKFKLEDRMESVDYGTNDYRWDDKIQANNFAAQEYNNWEAKLETSDYDTSEFTNKWDDKIQASNYMVNDYQYSDPMPMNSYNTHQAPAITSMSTMNSMSAMNSYQNFQPAPQPAVVIPNIIKQEETYPAAVVAPKNELKWTDKLKSFTDKNVLSWQDKFKAHQIKLDEKLKPYIGGGSSTTTTLPVNNNNNNVNIGNNINSNLIKTQYTDSVPIMYNNNSIQGQYGYNNGMNTMNTMKQTYTSDSISTYNSYGKEPLKPLNQYNYQDPVVKPTAQYNYQEPGQPVNHYKYQEPVKPLNQYNYQEPVNPVAQAAYNYQDPVKPGQTAYNYQEPVKPTTTAYNYQDSIKTTTGYNYQDPIVTKPANQYNYQEPVKPYPNVNVTNEYNVTNEYNYDDQTVPYDNDAHHEDDDDDYNYDDEGNSYNDDDENDDEYYNDDTNITSYTDVNAKYNYEETMKSYMADANEYKFDDKNKIEPIVKPIEPIIKIEEPKMIVEPTVTVPPAIVTNGAKMQIQDSYEDHDYNLDEHLESFPEEDDEYNYDDDEEISKPDTYDHDDEYDDKNESYPTEDDHFEDDDHIDHAMKVDVPVVEPKPSIDVKKPDEKISPKISELKTIAEEVKIEKEIGVKTADAIKDQHKLESDSNLNENDLKEDDKLESYEEGQDDKFEEDVVSFTEEKNEYDEEDQMNHEGDDKKDMELEEVPCSYCGQVYDNAFECPYHQQVKIEEPFDPDKTNRLDELCRGCLCTSDNLLSIFSQAVLDHDEAESDFEEGSSNTRNTEVTYLKMFEDCTSLEVDKMDGKPTSLCSDCIEELTASYSFRNKCINSDRELGTTMIKGEQDEEESGSTAGEQSVDKTETTNLKIVAIEDLVKLNETPIDEDENFMYEDHLIENELHEDNFEINPRSKIQTVDEEVTSIVGINVVDDNVFECQVCKSNFSNLDELQLHNYIHNPDRPFKCFEKKCKQCSFKNQEELEMHNFVYHTAENDTKCAYCNKDCKTKRALKSHMKTHSSERPHKCKSCDKAFIFSHHLKNHEKIHDNVKEFSCPECQKSFINKDRLALHQRIHTGKRPHKCETCDKAFISASSLKIHYATHTVEKPFMCTQCGMCFKLEIFLNTHLKKVHLETQTKDDSEPLVKSKHAKSKGDQKSCNICNTKFETPIECTRHIKTHSYKYFCHICKKPFALKTKLDSHMKNTHSSNLKYVCRVCSDKFHRPDLLRYHYLRKHANGKLPYTCEICERGFITNSDYKVHVRRHYGEKPFLCNFCDKRYITSSELLQHKRFHTGEKPYVCNLCEKPIATINLLLYHIRQHNKDGNIDSQRLNREVKDIESIVDEENMDEIQSEEMEND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01457776;
90% Identity: iTF_01054618;
80% Identity: iTF_01054618;