Basic Information

Insect: Tipula unca
Gene Symbol: -
Assembly: GCA_951394425.1
Location: OX596380.1:17912006-17920309[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0065 0.97 11.4 0.7 1 23 231 253 231 253 0.97

2 18 0.00022 0.032 16.1 2.8 2 23 260 282 259 282 0.96

3 18 6 8.9e+02 2.1 2.4 1 23 333 355 333 355 0.97

4 18 7.1e-06 0.0011 20.8 2.6 2 23 362 384 361 384 0.96

5 18 7.4e-05 0.011 17.6 0.5 2 23 450 472 449 472 0.96

6 18 2.5 3.7e+02 3.3 0.1 2 13 1216 1227 1215 1229 0.85

7 18 0.016 2.3 10.2 0.1 1 23 1451 1473 1451 1473 0.95

8 18 0.00023 0.034 16.0 4.7 2 23 1512 1533 1511 1533 0.98

9 18 0.0039 0.58 12.1 7.6 1 23 1539 1561 1539 1561 0.98

10 18 2e-06 0.0003 22.5 0.5 1 23 1567 1589 1567 1589 0.98

11 18 9.4e-06 0.0014 20.4 1.3 1 23 1595 1617 1595 1617 0.98

12 18 0.0019 0.29 13.1 2.5 1 23 1623 1646 1623 1646 0.97

13 18 0.091 14 7.8 4.6 3 23 1673 1693 1672 1693 0.98

14 18 0.0027 0.39 12.7 2.0 1 23 1697 1720 1697 1720 0.97

15 18 0.0056 0.83 11.6 2.7 1 23 1726 1749 1726 1749 0.97

16 18 4.7e-06 0.00069 21.3 0.5 1 23 1756 1778 1756 1778 0.98

17 18 0.00027 0.04 15.8 1.1 1 23 1784 1806 1784 1806 0.97

18 18 0.032 4.7 9.3 0.1 1 23 1812 1834 1812 1834 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0065	0.97	11.4	0.7	1	23	231	253	231	253	0.97
2	18	0.00022	0.032	16.1	2.8	2	23	260	282	259	282	0.96
3	18	6	8.9e+02	2.1	2.4	1	23	333	355	333	355	0.97
4	18	7.1e-06	0.0011	20.8	2.6	2	23	362	384	361	384	0.96
5	18	7.4e-05	0.011	17.6	0.5	2	23	450	472	449	472	0.96
6	18	2.5	3.7e+02	3.3	0.1	2	13	1216	1227	1215	1229	0.85
7	18	0.016	2.3	10.2	0.1	1	23	1451	1473	1451	1473	0.95
8	18	0.00023	0.034	16.0	4.7	2	23	1512	1533	1511	1533	0.98
9	18	0.0039	0.58	12.1	7.6	1	23	1539	1561	1539	1561	0.98
10	18	2e-06	0.0003	22.5	0.5	1	23	1567	1589	1567	1589	0.98
11	18	9.4e-06	0.0014	20.4	1.3	1	23	1595	1617	1595	1617	0.98
12	18	0.0019	0.29	13.1	2.5	1	23	1623	1646	1623	1646	0.97
13	18	0.091	14	7.8	4.6	3	23	1673	1693	1672	1693	0.98
14	18	0.0027	0.39	12.7	2.0	1	23	1697	1720	1697	1720	0.97
15	18	0.0056	0.83	11.6	2.7	1	23	1726	1749	1726	1749	0.97
16	18	4.7e-06	0.00069	21.3	0.5	1	23	1756	1778	1756	1778	0.98
17	18	0.00027	0.04	15.8	1.1	1	23	1784	1806	1784	1806	0.97
18	18	0.032	4.7	9.3	0.1	1	23	1812	1834	1812	1834	0.98

Sequence Information

Coding Sequence: ATGCAAAGGAACCCGTATTCATCCAAAGGATATATGTGGCAATCTGATCCACCAGCTTTAATAGAACCCTTAGAATATGTCTATCGTAATCCTCTTCCGTATACCACACCTGATGAGAATCGGTATCATGATGTTTGGGTCGATCCAAATATGGAACAACAGATCGTTGTCGAATCTTACAAAACTCAAACCAACTATCAAGTAAATCGGGAACGcactaaaattcgaattttacctGAAGTTAAGCCAAAGTGGAAATATATGGATATTGCAGATAAATATCGTGAAAATACAACAATTCGACGTAATAGTAATTATAGCTATAGTCAAAATCATTACCAATCATCATCGCCATTAAATTCGTCGGTTCATTCAAAAGTCATtagcacaaataaaaaatgtcgtgGATGTTTAAAATCAgataaaagttttgaatttgatGTTGATCAACAACAGTATTTTACATCGATTAAAgTCAAACCTGATTTTACAAATTCGGCTGGCTTATGCTTTAACTGTGCCGAAGAGCTTAAGCTAGCTtataattttcgtaaaaaatgtttgaaagcaaataaagattataaaactttattaagCATTAAAGATGTACCCATGTATGAAACaccaaaaccaaaatatcaaaatcatcatCAATCATTGATGGAGTATGATAGATCAAAGATCGGACCATTCGAGTGTAATCTTTGTGGCAAAATCGTTCGGACCTATAAGGGatggaaaaatcataaaatcaaacATGGTGCTGATTTGAATATCATGTGCGAAGAATGCGGTAAAAGTTTTATGCACGAAAGCAAATTGCATATGCACATCAAGAAAGAACATTCGACCAAACGTATTGAAATGTTTGGCCGTGATTACATGTCGATGAACATTCATAACGAGTATGGTGTGTTCGAGGATCGTGAAAATATATTCCTGAAATCATTATTTCCGGGCTCCATTGTCCCATATAACACAAATTCGGTTGGACGCTTCGAATGTGAAATTTGTTGCAAGGTGATTAAATCAATGAAAACAATGGAATTGCATCGGCAAAAACATATGCGAGAATTGGATTTAATGTGCGATGAGTGTGGTAAATGTTTTACTAATGAGCGCAAATTGAATTTGCATATACGGACCAAGCATCCGAAGTACGATGAAAACAGCATGGAATACATGAATAAAGATATCTGGATATTTAAATCGAAGTATTCCGATTCGACTATATTACAAAAACGTCAATACATGGGACCATTCGAATGCGATTTGTGTTGTAAGCTAAGCAAAACGCGCGAAGATATGGAGTATCATAATCAGCGTCATATGAGGGAATTGGATTTGGTGTGTGAAGAGTGTGGCAAAGGTTTCTCGTACAAAGAAAAATTGGAGCTGCACAAAAAAATGAAGCATTCACGTTATCAGCAAGATGTAGATGGCTACGGTTATCATGGGACCGgatatggaaaatataaaacagGAAACCACggcaaaaagaaatttaaacttgaaGACCGCATGGAATCCGTCGATTATGGGACCAACGAATATCGATGGGACGATAAAATTCAGGCCAACAATTTTGCTGCCCAAGAATACAATAATTGGGAGGCAAAATTGGAGACAAGTGATTACGATACAACCGAATTCACCAATAAATGGGATGATAAAATACAAGCCAGCAATTACATGGTAAACGATTATAAGTACTCAGATCCATTGCCAATGAATTCGTCGTATAATACCCATCAACCACCAGGAGGAAATATGCCCACCGTGGGCACTATGAGCTCAATGTCCACTATGAATAGCTACCCAAATTTCAAACCTACACCGCAACCCGCCGTTGTCATACCAAACATAATCAAAAAAGAAGAAACATATCCAGCAGCAGTTCCTCAAAAGATTGAGCTCAAGTGGACGGACAAATTAAAATCGTTTACGGATAAGAACGTCCTCAGTTGGCAAgacaaatttaaatcgaatccGTTTAGCAAAGCGGATTTCAAGcttgatgaaaaattaaaaccgtACATTGGAGGTGGTAGCAGTATTAGTACTACTACTATAGTTCCGGtgaacaataacaataacaatatcaATATCAGTAACAATATCAACAGTAACGCAATCAAATCTCAATACACGGATCCGGTACCAATcatgtacaataataataatgtacagCAAAGTCAACAACAATACGGTTACAATAACGGTATGAACGCTATGAGTTCAATGAAGCCGGCCTACACAAACGAATCCATAAGCACTTATAGTTCGTATGGGAAGGATCCTTTAAAACCGCTTAATCAATACAACTATCAAGATCCGGTAGTTAAACCGGTAGCCCAGTATAATTATCCAGAGGATGTACAGCCAGTTAATCAGTACACCAACTATCAAGAACCAGTTAAACCGATAAATCAGTATAATTATCAGGAAGCTGCTAAGCCAATTTCGCAAACAGCATACAATTACCAGCAAGATCCTTTAAAACCAAATCAAACTGCCTATAATTATCAGGAACCAGTTAAGCCCAACAAAACACCATATAATTATCAGGAGCCGGTTAAAGCATCGACTGGATATAACTATCCAGATCCGGTTGTTACAAAACCAGCAAATCAATATAACTACCAAGACCCGTTAAAACCATATCCAAACGTTAACGTTACCAACGAGTATAACGTTACCAATGAGTACAACTACGATGATCAGACGGTGCCATACGATGACGATGCACAtcacgatgatgatgatgattataatTACGACGATGAAGGTAATTCGTACAATGATGACGATGAGAATGACGATGAATACTATAACGATGATACTACGAATGTTACGACGTACACGGACGTAAACGCCAAGTATAATTATGAAGAGACAATGAAATCGTATATGGCTGATGCAAATGAGTATAAAtttgatgataaaaataaaattgagccGGTTGTTAAACCGATCGaaccaattattaaaattgaggaCCCGCCAAAGTTTGTGGAGCCAGTAATTATTCCGCCTGTAATCATTACGAATGGAGCAGTTAAAATGCAGATACAAGATTCGTATGAAGATCACGACTACAATATAGATGAGCATCTTGAATCGTTTCCAGAAGAAGATGATGAATATAATTACGAAGATGATGAAGAAATTTCCAAACCGAATACGTACGATCATGATGATGAGTACGATGAAAAAAATGAATCGTATCCAACCGAGGATGATCATTACGATGACGATGATCATATCGATCATTCGGATCATGCGATGAAAATTGATTTGCCAATTGTGGAGCCGGTAAAACCGATTGATGTAAAAAAAACGGAAGATAAATTATCGCCAAAAGTAAGCGAATTGAAAGCGATTGCGGAAGAGGTGAAAATTGATAAAGAAGTTATTGTTAAAACAACAGACGCGATCAAAGAGGAGCATAAATTGGAATCGGATCCCAATTTGAACGAAACTGATCTTAAAGAAGATGATAAATTGGAATCATACGAAGAAGGGCAGGATGATAAATTCGAAGAGGATGTTGTTTCATTCACCGAAGAGAAAAACGAGTACGATGAAGAGGATCAAATGAATCAGGAGGGGGATGATAAAAAGGATATGGAATTAGAAGAGGTGCCGTGTAATTATTGTGGTCAAGTGTATGATAATGCGTTTGAGTGCCCATATCATCAACAAttattcgaaattaattacGATATGCTAGAAATAGACGAGACCACGGACCCCGATAAAACCGGCAAATCGGTTGAATTATGTCGTGGCTGTTTATGCACATCGGATAACCTACATTCTATATTCAGTCCGGCTGTTTTGGATCAAGATGAAACAGATAGTGATGCCGAAGGCACACAGAATATCCGCAATATCGAAATTACCTATCTTAAAATGTTTGAAGAGTGCACATCCATAAAGGTAGAAAAATTGGACGGCAAACCGTCCTGTTTGTGTCCCGATTGCATCGAGGAATTGGCTGCATCGTATAGTTTTCGCAGTAAGTGTATTAATTCGGATAACGAGCTGGGCACTCTGGTCATGGTAGATGAACTGAATGATGAAGATAAAAGTTTTTCTGAAGATGCTGCTGATAAATCAGAGATAACTAACCTAAAAATAGTTGCCATTGAAAGTCTCGTTAAGTTAAATGAAACTCCAGTTGAGGATGAAGAAAGTTTTATGTACGAGGATCATCTAATTGAGATCGCAGATAATGAGGATGATCATCATGAAGATGACTATGAATTAAGCACAGATACCAATGTAAAAGCAGACGACGAAGAAAACATATCGAATGAAGAAGAAAATTCAGGTGATGATGCTGTATTCGAGTGCCAAATCtgcaaatcaatttttgaaagtttaagcGACCTTCAACTGCACAATGCCATTCATAATCCAGAACGACCGTTTAAATGTTTCGAAAAAAAGTGTAAACAATGCTCATTTAAAACCCAAGAGGAACTCGAAATGCATAATTTCGTGTATCACACCATTGAAAACGTAACCAAATGTGCGTACTGTAGTAAGAACTGTAAAACGAAAAGGGCTTTAAAGGCACATATGAAGACACATTCAACAGATCGGCCGCACAAGTGCAAAAACTGTGAGAAGGCGTTTATTTTTTCGCATCATCTCAAGAATCACGAAAAAATACACGAAAATGTTAAAGAATTTACGTGCCCCGATTGTCAGAAGTCGTTTATCAATAAAGATCGGCTAGCACTACATCAACGTATACATACTGGAAAAAGACCGCATAAATGCTCAACCTGTGACAAAGCTTTTATAAGCGCAtcttcattaaaaattcattacgCAACACATACAGCCGAGAAACCGTTTATGTGTACACAGTGTGGAATGTGCTTTAAACTAGAAGTATTCCTGAATACTCATCTCAGAAAAGCACATTTAGGGCTCGTTAAAAATTATCCAAACCCTTCAATACCTAAGCGAAAACCAGTCAAACCGAAGgaagaacaaaaattttgtaacctTTGTAATACTAAATTTGAAACTTCGATTGAATGCACCCGTCACATGAAGACCCATAGCTATAAATACTCTTGCCACATCTGCACAAAACCATTTGCGCTTAAAAATAAACTGGACTCGCATATTAAAAATACTCACGCTACCAATTTAAAATACGTTTGTGGCAAATGTTCCGAAAAATTCCATCGGCCCGATTTGTTACGATATCACTACCTACGTAAACATGCAGATGGGAAATTACCATTTACATGCGAAATTTGTGATCGTGGATTTATAACGAATAGCGACTATAAGGTACATGTACGTAGGCATTATGGGGAAAAACCCTACGCTTGTAACTTATGTGAAAAGCGGTATGTGACATCGTCCGAATTGCTTCAGCATAAACGTTTTCATACGGGTGAAAAACCGTATGTTTGTAATCTATGTGATAAACCTATTGCGACAATTAATTTACTATTGTATCATATCAAGCAGCATAATAAGGATGATATTATGGATTCGGAGCGTTATAATCAAGAGGTGAAGGCGATTGAAAGTATTGCGGATGAGCAGGTAGAtgaaatacagccagaggaggtggaaaatgattga
Protein Sequence: MQRNPYSSKGYMWQSDPPALIEPLEYVYRNPLPYTTPDENRYHDVWVDPNMEQQIVVESYKTQTNYQVNRERTKIRILPEVKPKWKYMDIADKYRENTTIRRNSNYSYSQNHYQSSSPLNSSVHSKVISTNKKCRGCLKSDKSFEFDVDQQQYFTSIKVKPDFTNSAGLCFNCAEELKLAYNFRKKCLKANKDYKTLLSIKDVPMYETPKPKYQNHHQSLMEYDRSKIGPFECNLCGKIVRTYKGWKNHKIKHGADLNIMCEECGKSFMHESKLHMHIKKEHSTKRIEMFGRDYMSMNIHNEYGVFEDRENIFLKSLFPGSIVPYNTNSVGRFECEICCKVIKSMKTMELHRQKHMRELDLMCDECGKCFTNERKLNLHIRTKHPKYDENSMEYMNKDIWIFKSKYSDSTILQKRQYMGPFECDLCCKLSKTREDMEYHNQRHMRELDLVCEECGKGFSYKEKLELHKKMKHSRYQQDVDGYGYHGTGYGKYKTGNHGKKKFKLEDRMESVDYGTNEYRWDDKIQANNFAAQEYNNWEAKLETSDYDTTEFTNKWDDKIQASNYMVNDYKYSDPLPMNSSYNTHQPPGGNMPTVGTMSSMSTMNSYPNFKPTPQPAVVIPNIIKKEETYPAAVPQKIELKWTDKLKSFTDKNVLSWQDKFKSNPFSKADFKLDEKLKPYIGGGSSISTTTIVPVNNNNNNINISNNINSNAIKSQYTDPVPIMYNNNNVQQSQQQYGYNNGMNAMSSMKPAYTNESISTYSSYGKDPLKPLNQYNYQDPVVKPVAQYNYPEDVQPVNQYTNYQEPVKPINQYNYQEAAKPISQTAYNYQQDPLKPNQTAYNYQEPVKPNKTPYNYQEPVKASTGYNYPDPVVTKPANQYNYQDPLKPYPNVNVTNEYNVTNEYNYDDQTVPYDDDAHHDDDDDYNYDDEGNSYNDDDENDDEYYNDDTTNVTTYTDVNAKYNYEETMKSYMADANEYKFDDKNKIEPVVKPIEPIIKIEDPPKFVEPVIIPPVIITNGAVKMQIQDSYEDHDYNIDEHLESFPEEDDEYNYEDDEEISKPNTYDHDDEYDEKNESYPTEDDHYDDDDHIDHSDHAMKIDLPIVEPVKPIDVKKTEDKLSPKVSELKAIAEEVKIDKEVIVKTTDAIKEEHKLESDPNLNETDLKEDDKLESYEEGQDDKFEEDVVSFTEEKNEYDEEDQMNQEGDDKKDMELEEVPCNYCGQVYDNAFECPYHQQLFEINYDMLEIDETTDPDKTGKSVELCRGCLCTSDNLHSIFSPAVLDQDETDSDAEGTQNIRNIEITYLKMFEECTSIKVEKLDGKPSCLCPDCIEELAASYSFRSKCINSDNELGTLVMVDELNDEDKSFSEDAADKSEITNLKIVAIESLVKLNETPVEDEESFMYEDHLIEIADNEDDHHEDDYELSTDTNVKADDEENISNEEENSGDDAVFECQICKSIFESLSDLQLHNAIHNPERPFKCFEKKCKQCSFKTQEELEMHNFVYHTIENVTKCAYCSKNCKTKRALKAHMKTHSTDRPHKCKNCEKAFIFSHHLKNHEKIHENVKEFTCPDCQKSFINKDRLALHQRIHTGKRPHKCSTCDKAFISASSLKIHYATHTAEKPFMCTQCGMCFKLEVFLNTHLRKAHLGLVKNYPNPSIPKRKPVKPKEEQKFCNLCNTKFETSIECTRHMKTHSYKYSCHICTKPFALKNKLDSHIKNTHATNLKYVCGKCSEKFHRPDLLRYHYLRKHADGKLPFTCEICDRGFITNSDYKVHVRRHYGEKPYACNLCEKRYVTSSELLQHKRFHTGEKPYVCNLCDKPIATINLLLYHIKQHNKDDIMDSERYNQEVKAIESIADEQVDEIQPEEVEND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01457776;
90% Identity: -
80% Identity: -