Tfem001496.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tiphia femorata
Gene Symbol
pnr
Assembly
GCA_944319705.1
Location
CALUEQ010000026.1:1306379-1313348[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.1e-18 1e-14 54.0 3.2 1 34 164 196 164 198 0.97
2 2 6.2e-19 1.5e-15 56.6 6.2 1 35 223 256 223 257 0.98

Sequence Information

Coding Sequence
ATGTTCCACGGGGGCGGAAGTGGTGGGTACGGTGCAGGTTCCGATTACCAGCAACAATCCCAGCAACAACAGCAACAGCACGGCCAGCAACTTCAGGCGCCCGTATATGTGCCATCGTCAAGGCCTGCGATACCATCCGCAGCCACGGCGGCCCAGTATCATTCGTTTCCTGGTTCGGCCTCGCCCGCATGGGAGAAGACGGCATCGTGGCAGCACGGAGTGGAGACATATGCGGCTCATCATGCGCTCGCAGGCCACGCGAGCGGAACCGCGGCCGCAATGGGGCCGCACGCAGGTCACGCGCATCCACACGCGGGTCATCCGCACACCGCGCATCCTCACTCGACGCTGGCCGCCGCGGCGGCGGCGCCCTTCTACGCGCAGAACGTCGCGATGATGTCCTCTTGGCGAGCGTACGACGGCGCGGGCTTCCAGCGCGCCTCGCCCTACGACACCGCGATGGACTTTCAATTCGGAGAGGGACGCGAGTGCGTAAATTGCGGGGCAATTTCCACACCACTCTGGCGAAGGGACGGCACAGGACATTACCTGTGCAACGCTTGTGGACTTTACCACAAGATGAACGGGATGAATCGTCCGCTGATCAAGCCCTCGAAGCGACTGATCTCCGAATTTCAGACTGCCACGAGGCGGATGGGACTATGCTGCACGAACTGTGGGACGCGCACGACTACCCTATGGAGGCGCAACAACGAGGGTGAACCAGTCTGCAACGCCTGCGGCCTTTACTTCAAGCTGCACGGTGTCAACCGACCCCTGGCCATGCGAAAGGACGGCATACAAACGAGAAAGCGGAAGCCGAAGAAAACACCTGAGCCTAATGCCAGGCCGTCTACGGGGGAGCACGACGCCACCGCATCCACCGCTTCTTCGCCTTCCACAGACCTCAAGACCAGCCAACAGCAGCAGCAGCAACAACAACAGCAACATCAGATTGAGATGTCCAAGTCCTCGAGCTCCTCAACCTCCACTGAGAGGCCTGTCTACCTCGGACACACCTCGTTACTGGCGACGGGCAGCGTACCAGCCGTGAAAACGGAGCCACGAAGCTGCGACGGCGTGGTAGGACAACCTTACGCGTCTTACTATCAGCATCCACATCAATTAGGCGTTCCTACGAGCGAGCATCAGCAACAGAGTTACTACGGGACCCAGGAGGCGCCCTATCATCATCAGCACCATGTCACGGCAGCTGCCAAGTTGCTTGCCTCATCGTAA
Protein Sequence
MFHGGGSGGYGAGSDYQQQSQQQQQQHGQQLQAPVYVPSSRPAIPSAATAAQYHSFPGSASPAWEKTASWQHGVETYAAHHALAGHASGTAAAMGPHAGHAHPHAGHPHTAHPHSTLAAAAAAPFYAQNVAMMSSWRAYDGAGFQRASPYDTAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLISEFQTATRRMGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPNARPSTGEHDATASTASSPSTDLKTSQQQQQQQQQQHQIEMSKSSSSSTSTERPVYLGHTSLLATGSVPAVKTEPRSCDGVVGQPYASYYQHPHQLGVPTSEHQQQSYYGTQEAPYHHQHHVTAAAKLLASS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00460161; iTF_00829153; iTF_01199809; iTF_00770772; iTF_01199068; iTF_01476609; iTF_00397730; iTF_00398504; iTF_00841516; iTF_01306906; iTF_00798946; iTF_01129731; iTF_01056461; iTF_01058035; iTF_01057306; iTF_01131234; iTF_01271618; iTF_01270186; iTF_01268665; iTF_01267220; iTF_01270870; iTF_01422594; iTF_01477259; iTF_01389859; iTF_01391623; iTF_01394792; iTF_01393161; iTF_01392435; iTF_00461228; iTF_00201346; iTF_00011608; iTF_00980603; iTF_01520643; iTF_00280804; iTF_00774180; iTF_01512517; iTF_00293382; iTF_01474343; iTF_01475116; iTF_00298737; iTF_00297971; iTF_00296438; iTF_01475864; iTF_00295674; iTF_00294907; iTF_00297212; iTF_00292607; iTF_01473583; iTF_00414726; iTF_00738758; iTF_01120546; iTF_01234022; iTF_00263943; iTF_01256072; iTF_00393959; iTF_00757033; iTF_01513833; iTF_01355786; iTF_01523722; iTF_00263019; iTF_00417963; iTF_00880140; iTF_00880905; iTF_00881674; iTF_00882628; iTF_00883461; iTF_01365068; iTF_00253229; iTF_00291957; iTF_00294135; iTF_00254746; iTF_00255486; iTF_00252480; iTF_00253984; iTF_01538413; iTF_01229422; iTF_01423310; iTF_01228687; iTF_01421903; iTF_01424047; iTF_01493263; iTF_01493986; iTF_00058352; iTF_00059114; iTF_00721680; iTF_00059849; iTF_01379697; iTF_01207781; iTF_00051411; iTF_00182323; iTF_00181655; iTF_00343540; iTF_00266852; iTF_01103940; iTF_01101744; iTF_01102451; iTF_01103223; iTF_00439880; iTF_00266122; iTF_01101003; iTF_00829904; iTF_01299674; iTF_00905780; iTF_01232692; iTF_01515156; iTF_01090357; iTF_01513141; iTF_00770039; iTF_01245601; iTF_00126372; iTF_00130150; iTF_00127853; iTF_00127121; iTF_00129401; iTF_00128636; iTF_00729734; iTF_00869288; iTF_01255208; iTF_00730409; iTF_00452906; iTF_01087564; iTF_00264685; iTF_01099567; iTF_01408719; iTF_01016212; iTF_01477972; iTF_01407830; iTF_01409619; iTF_00015735; iTF_00017016; iTF_00110200; iTF_01077849; iTF_00899194; iTF_00182972; iTF_00385951; iTF_01406175; iTF_00265344; iTF_00885568; iTF_00766061; iTF_00280344; iTF_01235385; iTF_01234692; iTF_01262138; iTF_00391677; iTF_00633982; iTF_01393950; iTF_01395519;
90% Identity
iTF_01422594; iTF_01476609; iTF_01520643; iTF_01355786; iTF_01523722; iTF_00417963; iTF_00766061; iTF_01406175; iTF_00885568; iTF_01423310; iTF_01228687; iTF_01421903; iTF_01424047; iTF_00182323; iTF_01016212; iTF_01477972; iTF_01408719; iTF_01407830; iTF_01409619; iTF_00181655; iTF_00110200; iTF_00182972; iTF_00385951; iTF_00126372; iTF_00130150; iTF_00127853; iTF_00127121; iTF_00129401; iTF_00128636; iTF_00393959; iTF_01256072; iTF_01099567; iTF_01090357; iTF_00015735; iTF_01477259; iTF_00017016; iTF_01262138; iTF_01077849; iTF_01255208; iTF_00869288; iTF_00265344; iTF_01245601; iTF_00280804; iTF_00729734; iTF_00730409; iTF_00264685; iTF_00280344;
80% Identity
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