Spar005980.1
Basic Information
- Insect
- Syrista parreyssii
- Gene Symbol
- pnr
- Assembly
- GCA_030142615.1
- Location
- JARQTG010000188.1:2919863-2923619[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-18 8.7e-15 54.0 3.2 1 34 161 193 161 195 0.97 2 2 4.6e-19 1.3e-15 56.6 6.2 1 35 220 253 220 254 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGAGCGGAAGTGGCGGGTACGGCGCAGGTTCCGATTACCAGCAGCAATcccaacagcaacaacaacaacacagCCAGCAGCTACAAGCACCCGTTTACGTTCCTTCTTCAAGACCAACGATACCTTCAGCAGCCGCAGCCGCCCAGTATCATTCATTTCCAGGCTCTGCCTCACCCGCATGggaaaaaacagCCTCATGGCAGCACGGGGTGGATACCTACGCTCATCATGCACTTGCAAGTCACACTGGGAGTTCTGCAGGCGGTATGGGACCTCATACAGGACATACTCATCCTCATACAGGTCATCCTCACGCAGCTCATCCTCATTCGACCTTAGCAGCAGCCGCGCCCTTTTACGCACAGAACGTCGCTATGATGTCCTCATGGCGCGCCTACGACAGCGCTGGCTTTCAACGTGCATCTCCATACGacACAGcaatggattttcaatttgGAGAAGGACGCGAGTGCGTTAACTGCGGCGCTATTTCCACGCCGCTTTGGAGACGGGACGGCACTGGTCATTATCTGTGTAACGCCTGCGGCCTTTATCACAAAATGAATGGGATGAATCGTCCACTGATAAAACCATCGAAACGCCTCATCTCCGAATTCCAGACGGCTACGCGACGGCTTGGATTGTGCTGTACAAATTGCGGTACAAGAACAACAACACTGTGGAGGCGCAACAACGAAGGAGAACCGGTGTGCAACGCTTGTGGATTGTACTTCAAGTTGCACGGTGTGAACAGACCATTAGCCATGAGAAAAGACGGGATTCAGACCAGGAAACGCAAGCCTAAAAAGACGCCTGAACCAAACGCCAGACCCTCTGTTGGTGATCATGAAACAACAACATCAACAACATCATCACCGTCCAGTGAGCTCAAGAGCAgccaacagcaacaacaacagcaacatcaAATAGATACTGCAAAATCTAGCAGCTCATCCATCACTACTGATCGTCCAGTTTACCTAGGCCATACCTCGTTACTTGCTACCGGAAGTACACCAGCTGTCAAAACGGAACCTAGAAGCTGCGACGGTACCGTCGGACAAGCTTATACCTCTTACTATCAGCATCCTCATCAGCTTGGTACCCCTACTAGTGAACATCAACAACAGAGTTATTACGGTACCCAAGAAGCACCTtatcatcatcaacatcacGTCACTGCCGCAGCTAAGCTTTTGGCGTCTTCGTAA
- Protein Sequence
- MFHGSGSGGYGAGSDYQQQSQQQQQQHSQQLQAPVYVPSSRPTIPSAAAAAQYHSFPGSASPAWEKTASWQHGVDTYAHHALASHTGSSAGGMGPHTGHTHPHTGHPHAAHPHSTLAAAAPFYAQNVAMMSSWRAYDSAGFQRASPYDTAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLISEFQTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPNARPSVGDHETTTSTTSSPSSELKSSQQQQQQQHQIDTAKSSSSSITTDRPVYLGHTSLLATGSTPAVKTEPRSCDGTVGQAYTSYYQHPHQLGTPTSEHQQQSYYGTQEAPYHHQHHVTAAAKLLASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01454536;
- 90% Identity
- iTF_01473583;
- 80% Identity
- -