Lcla006066.1
Basic Information
- Insect
- Leptopilina clavipes
- Gene Symbol
- pnr
- Assembly
- GCA_001855655.1
- Location
- JUFY01035735.1:19991-25163[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.6 1.2e+04 -3.5 0.0 8 15 57 64 56 66 0.81 2 3 3.8e-18 1.3e-14 54.0 3.2 1 34 153 185 153 187 0.97 3 3 5.8e-19 1.9e-15 56.7 6.2 1 35 207 240 207 241 0.98
Sequence Information
- Coding Sequence
- TACGGCGCAAGTTCCGACTATCAACAACAAtcgcaacaacaacaacagcaacagGGACACCAACTTCAGGCCCCGGTTTATGTCCCATCATCGAGACCGGCCATTCCCTCAGCAGCCACGGCCGCACAATACCATTCTTTCCCTACTTCCGCATCCCCAGCatgGGATAAAACGGCTTCCTGGCAACATGGGGTAGACAGTTACGCTCACCATACATTGGCTGGCCACACAGGTAGTTCGGCAGGTGGATTGGGACCACATGGAGGACATGGACATCCACATGGTGGACATCCCCATGCGGCTCATCCCCATTCAGCCCTCGCTGCAGCAAATTCCCCCTTTTACGCACAAAATGTTGCGATGATGTCATCATGGAGAGCGTACGATAGCGCGGGATTTCAAAGAGCCTCACCTtatgaTTCGTCAATGGAATTTCAATTTGGCGAGGGACGAGAATGTGTAAATTGTGGAGCAATTTCAACACCCCTTTGGCGACGCGATGGAACTGGTCATTATCTTTGTAATGCTTGTGGTCTTTATCACAAAATGAATGGCATGAATCGACCACTTATCAAACCCTCAAAGCGATTGACTGCAACGAGACGACTTGGATTATGCTGTACAAATTGTGGTACACGAACAACCACATTGTGGAGGCGCAATAATGAGGGGGAGCCAGTTTGCAATGCCTGTggtttatatttcaaattgcaCGGTGTCAATCGACCATTGGCCATGAGGAAGGACGGAATTCAAACGAGAAAAcgaaaaccaaaaaaaacaaCCGAACCGAATGCCCGAACATCGCACACCGAACATGAAACATCTGACTCGACAGCATCTTCCCCATCCAATGAAGGTAAGAGTAGACAAAGTCAGCAGCAGCATCAAGATGTACCAAAATCATCAAGTTCATCGACAACGACGGAAAGGCCCGTTTATCTTGGTCACACATCACTCCTTCCAACCGGAAGTACTCCAACTGTAAAAACGGAACCGCGAAGTTGTGAAGGTGTCGTGGCGCAACCATATTCATCATATTATCCTCATCCTCATCAGTTGAGTACACCAACAAGTGAACATCAACAATCTAGTTATTATGGAGCTCAGGAAGCGCCATATCATCATCAGCATCACGTCACTGCAGCAGCAAAATTACTAGCATCCTCTTAG
- Protein Sequence
- YGASSDYQQQSQQQQQQQGHQLQAPVYVPSSRPAIPSAATAAQYHSFPTSASPAWDKTASWQHGVDSYAHHTLAGHTGSSAGGLGPHGGHGHPHGGHPHAAHPHSALAAANSPFYAQNVAMMSSWRAYDSAGFQRASPYDSSMEFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTTEPNARTSHTEHETSDSTASSPSNEGKSRQSQQQHQDVPKSSSSSTTTERPVYLGHTSLLPTGSTPTVKTEPRSCEGVVAQPYSSYYPHPHQLSTPTSEHQQSSYYGAQEAPYHHQHHVTAAAKLLASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01454536;
- 90% Identity
- iTF_00883461; iTF_00882628; iTF_00881674; iTF_01394792; iTF_01389859; iTF_01391623; iTF_01393161; iTF_01392435; iTF_00880140; iTF_00980603; iTF_00201346; iTF_00461228; iTF_00011608; iTF_01393950;
- 80% Identity
- -