Ocos011676.1
Basic Information
- Insect
- Ophion costatus
- Gene Symbol
- pnr
- Assembly
- GCA_951751655.1
- Location
- OX632360.1:15026108-15040567[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-18 1.4e-14 53.9 3.2 1 34 165 197 165 199 0.97 2 2 6.3e-19 2.1e-15 56.6 6.2 1 35 224 257 224 258 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGTAGCAGCAGCGGTGGGTACGGCGCGGGCTCCGAATACCAGCAACAATctcaacagcagcaacaacagcagcacgCGAATCAGCAAGGTCTCCAGGCACCCGTTTACGTGCCTTCATCCAGGCCGGCAATACCATCGGCAGCTACGGCGGCGCAGTATCACTCGTTTCCTGGTTCCGCTTCACCCGCCTGGGAAAAAACGGCATCATGGCAACACGGGGTGGACAGTTACGCGGCTCACCACGCTCTCGCCGGTCACACAGGCGGCTCGGCCGGTGGTATGGGACCCCATGCGGGTCACGGCCATCCTCATTCGGGACATCCTCACACGGGCCACCCGCATTCGACCCTAGCCGCGGCATCGCCGTTCTACGCTCAAAATGTCGCGATGATGTCATCGTGGCGAGCTTACGACGGTGCCGGATTTCAGAGAGCTTCTCCGTACGACACAGCGATGGATTTTCAGTTCGCGGAGGGTCGTGAGTGCGTTAATTGCGGGGCCATATCGACCCCTCTCTGGCGACGGGACGGTACCGGACATTATTTGTGCAACGCGTGCGGACTTTATCACAAAATGAACGGGATGAATCGACCACTCATCAAGCCCTCGAAACGCCTCATCTCCGAATTCCAGACTGCCACGAGACGACTCGGACTGTGCTGCACGAATTGCGGAACCCGAACGACGACACTGTGGAGGCGCAACAACGAGGGCGAACCCGTCTGCAACGCTTGCGGCCTTTATTTCAAACTTCACGGCGTCAACAGACCTTTGGCAATGCGAAAAGACGGCATACAAACCAGAAAGAGAAAGCCGAAGAAAACACCCGAGCCAAACGCGAGATCTTCGTCCGGGGAGCACGAGACTTCGGCTTCGACGACCTCTTCGCCCTCAAATGAGATGAAGAGCAAtcaacagcaacagcagcaacagcagcaccaGCATCATCACATCGAGACGTCGAAAAGCTCGTTGTCGTCGGTATCGGCGGACCGGCCGGTCTATCTCGGCCACACTTCGCTCCTCGCGACCGGAAGTGTCGTACCTGCGGTCAAGACGGAACCCCGCAGCTGCGACAGTCACGTGGGTCAACCTTACAACTCGTACTACCAGCATCCTCATCAATTAGGAACGTCGACGAGCGAACATCAGCAGCAGAGCTACTACGGTGCTCAGGAAGCTCCTTATCATCATCAGCATCACGTGACCACAGCTGCAAAATTACTCGCCTCGTCATAA
- Protein Sequence
- MFHGSSSGGYGAGSEYQQQSQQQQQQQHANQQGLQAPVYVPSSRPAIPSAATAAQYHSFPGSASPAWEKTASWQHGVDSYAAHHALAGHTGGSAGGMGPHAGHGHPHSGHPHTGHPHSTLAAASPFYAQNVAMMSSWRAYDGAGFQRASPYDTAMDFQFAEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLISEFQTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPNARSSSGEHETSASTTSSPSNEMKSNQQQQQQQQHQHHHIETSKSSLSSVSADRPVYLGHTSLLATGSVVPAVKTEPRSCDSHVGQPYNSYYQHPHQLGTSTSEHQQQSYYGAQEAPYHHQHHVTTAAKLLASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01454536;
- 90% Identity
- iTF_01379697;
- 80% Identity
- -