Tcri037720.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Timema cristinae
Gene Symbol
lrrfip2
Assembly
GCA_002928295.1
Location
CM009483.1:68907616-68927359[+]

Transcription Factor Domain

TF Family
LRRFIP
Domain
LRRFIP domain
PFAM
PF09738
TF Group
Unclassified Structure
Description
LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-113 9.3e-109 364.8 28.3 1 300 576 882 576 882 0.90
2 2 0.00033 16 6.1 3.9 120 173 880 933 879 938 0.95

Sequence Information

Coding Sequence
ATGGAAGATGCCGACGAATGTTGCTTCTACGACGCCGTCAGTGAGATACCCCTGAGCAAGCCGAGGATGGGCAACACCGCCGGTGTGGAGGGCACCAAAGAGGGCGGACGCCCAGGCCTCGCCGACGAGTTCCCCATAGTTCCGGTGATTGACCCGCGACAAGACGACAGTGACGACACCTCAAGTAATCCCGAGATTAGCTCGCGTTTCTCAGATAAATCCGCTCCAATCGATAGCGATAAGGAAAGTTCGACGTCGCTCAGTGATCAATCAGATCTGGACGAAAGAGACGATTCGGGCAGACCGTCGATGGCGGTTTCTCAGAGAGACCCGCGCTGTACAGAGGCGTCCGTGGGCGCCGACATTTCGGGTGAAGAGGACGCCGGTGTCGCGACCTTTGACGACGAGGGCTCGCTCAGGGTGGATCGTGTTGTGGCGAGGGGGGGCGACCTGGGTGTGAATCTGCCGGACACTTTTGGAGAGAGTACGACTGAAGACTGTGAGGTCCAGAGTGTAGATGACCCCGTAGTCAAGGAAAAGATTGTAAGCACCCTTTGTAAGGGTGTGCTGGCCACGCCCCCCAAGGATGAGGAGCCTGTTGGTGACGTTTCGGACGTGAGCTCCTCGGCCCTTGGAGACATCCCGCGGTCAAGTCCTGACAGTGACAAGGCCTCTGTATCCACCGAGGAAGATACTTTAGTGTCCAAAGACAAGGGGAAAACCGTTGAGGACACTCTGTTGGCCGCTGAAAGTTGTTGTGATGGGGCTGATTCCCAGGATAGTAGGGAGTGTCTTGATGAGGCACCCTCTGAAGAAAGTGCTAACCAAGTTGGAAGTTCTGCGATTGAAAATAGTGCTTCAGGAAGTGGATCTAGTAAGAAGGTGGACATTGGAAATGATATCACTGACATCAGCAAAGAGGAAGAGAGGTTAGTTTCTAAAATAGAGGATGAAAAGGGAGAAGATATTGATAAGATTCCAAAGAACAGGGATATTGTTGGTGAATTAGGGGATGTAAAGGAGGAAAATGAGAAGAAAAATGATATTGTTTGTGAATTTGGGGGTGTAAAGGAGgaagatgagaaaaaaaattatattgttggtGAATTTGGGGGTGTAAAGGAGGAAGATgagaagaaaaattatattgttggtGAATTTGGGGATGTAAAGGAGGAAGATGAGAAGAAAAATGATATTGTTGGTGAATTTGTGGGTGTAAAGGAGGAAGATGAGAAGAAAAATGATATTGTTGGTGAATTTGAGGGTGTAAAGGAGGAAGATGAGAAGAAAAATGATATTGTTGGTGAATTTGAGGGTGTAAAGGAGGAAGATgagaagaaaaattatattgttgggGGATCAGGGGATGCAAAGGAGGAAGATGGGAGGAAAAATGATGTAGTTGGTGAATCAGGGTCTGGTAATGATGATAACAGGGGTGTCAAAAGAGTAGAAAATTTGCCAGGTTATATATTTTGGGAGGAAAGCAAGAAAGGGAAAGAAGACACTGCTGATATCAATGGAATGAAAGAGAATGCAATTGATAAAGCTGTGGATAGAAATGATGGTGATTATACTACCGAAGATAGTGATGGCTATGATCTTGACGACGATGAAGATATCAATAACAAATACAGAAGTAAAGGGAATGTGGTCGATGAAACAGAGAATGAAGAAGATGCCGACTACCTGAATAATTTTCTCGGGAAAAGCAATGACCAAGCAGAGGCCCGCCTTGCAGCGAGGAGGCAGGCGAGGGCAGAGGCCCGGGAGATACGCATGCGGGAACTCGAGAGGCAACAGAAGGAAATTGAGGAGAACACCAACAAGAGTTATGACTCCTTCACCGCAGAGCCGGGGAATAGGACGCCCCGTGTGGCCGCCTCCGTGAACCGCAGCAGCTCGCTGCTCTCTGGTGGAGGTAATAACAGTTACCACTCGAGTCGGCGCAGCTCGGAGGACTCGTTGGAGGAAGGGATCAGTCTCAGAGATGTCCGGCACGAGTTAAAGGAGGTGGAAGATAAGTTTCGAAAGGCGATGATACAGAATGCCCAGTTGGATAACGAGAAGGCATCCCTCACCTACCAGGTGGAACTCCTTAAGGACAGGCTGGAAGACCTGGAGGAGTCCCACTCGCAGTTGCAGCGTGAGCACCGCGACAAGTGTCGAGAACACGATCAGCTCAAGAGAGCGTCCGCCAAGTTGAAGGAAGACATGGAGTGGTACAAGGCGCAGTTGGAAGAGAGGGACAGACTCATTCAGGAGAAGGGCCTTATAATCGTGGGTGACGACCAGCTTTCCAGCGAGGACGAAAGTGTGGGTGATGACTCGCCCAAGAAACCTCCCAAGAGGGCTCTGGTCTCCATCGAGTCGGCGGAGATGTTGGAAACTGCAGGAGAGGGCTCTTTAGACGTACGGCTGAGGAGGTTTGCGGAGGAGCGCAACGAACTGCTGGACCAAGTGAGGCACCTCAAACTTGAATTGGAAGAGGAGCGCAGCAGACACAAGTCCGACGCCAAGAGGATACCTGGGGCCAGCCTCAACGGCCCTGACACAGATTTTGAGGACATCCAGAGGGAGGCCAACAAGCTTCTAGGGGACTACAAGTTCAAGCTACAAAAAGCGGAGCAGGATGTGTCTACACTGCAGGCCAATGTGGTGCGTCTTGAAAGCCAGGTGATTAGGTACAAATCTGCCTCAGAGTCCTCGGAGAAGGGTGAGGATGAACTTAAGGTTGAGAAGAGGAAACTTCAGAGAGAGGTGCGAGAGTTGACGCAGCAACTGAGTCAGGCTGAGGCGGCTAAGGCTGCCTTGACTCATCAGTTCGACCAGCTTATGTTCGCCAAGAGATAA
Protein Sequence
MEDADECCFYDAVSEIPLSKPRMGNTAGVEGTKEGGRPGLADEFPIVPVIDPRQDDSDDTSSNPEISSRFSDKSAPIDSDKESSTSLSDQSDLDERDDSGRPSMAVSQRDPRCTEASVGADISGEEDAGVATFDDEGSLRVDRVVARGGDLGVNLPDTFGESTTEDCEVQSVDDPVVKEKIVSTLCKGVLATPPKDEEPVGDVSDVSSSALGDIPRSSPDSDKASVSTEEDTLVSKDKGKTVEDTLLAAESCCDGADSQDSRECLDEAPSEESANQVGSSAIENSASGSGSSKKVDIGNDITDISKEEERLVSKIEDEKGEDIDKIPKNRDIVGELGDVKEENEKKNDIVCEFGGVKEEDEKKNYIVGEFGGVKEEDEKKNYIVGEFGDVKEEDEKKNDIVGEFVGVKEEDEKKNDIVGEFEGVKEEDEKKNDIVGEFEGVKEEDEKKNYIVGGSGDAKEEDGRKNDVVGESGSGNDDNRGVKRVENLPGYIFWEESKKGKEDTADINGMKENAIDKAVDRNDGDYTTEDSDGYDLDDDEDINNKYRSKGNVVDETENEEDADYLNNFLGKSNDQAEARLAARRQARAEAREIRMRELERQQKEIEENTNKSYDSFTAEPGNRTPRVAASVNRSSSLLSGGGNNSYHSSRRSSEDSLEEGISLRDVRHELKEVEDKFRKAMIQNAQLDNEKASLTYQVELLKDRLEDLEESHSQLQREHRDKCREHDQLKRASAKLKEDMEWYKAQLEERDRLIQEKGLIIVGDDQLSSEDESVGDDSPKKPPKRALVSIESAEMLETAGEGSLDVRLRRFAEERNELLDQVRHLKLELEEERSRHKSDAKRIPGASLNGPDTDFEDIQREANKLLGDYKFKLQKAEQDVSTLQANVVRLESQVIRYKSASESSEKGEDELKVEKRKLQREVRELTQQLSQAEAAKAALTHQFDQLMFAKR*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01444786;
90% Identity
iTF_01448571;
80% Identity
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