Tcri023963.1
Basic Information
- Insect
- Timema cristinae
- Gene Symbol
- tfip11
- Assembly
- GCA_002928295.1
- Location
- CM009479.1:96479324-96497207[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-96 1.1e-91 308.7 20.5 1 275 414 680 414 680 0.97 2 2 0.12 2.9e+03 -1.0 0.0 157 189 692 723 685 730 0.72
Sequence Information
- Coding Sequence
- ATGGCAGATGAAGAGGTGATGAAGTTTGAGATCACCGACTATGATCTCGACAATGAATTCAACATAAACAGGCCAACTCGCAAGATCAGTAAAAACCAGCAGATTTACGGTATCTGGGCTGATGACAGCGATGGAGAAGAAGATGCCAGTGGCCCCAGTAGGCCCAGTTTCAAGGGTTCGAGCAGAGGAAAAGCCAACTATGCTGCTCCTGTGAGTTTTGTGGCAGGAGGAGTGCATCAGGCGGGCAAAAAGAAAGAACCCGAGAATAAAAAGGAGAAGAAGAGTGATGATGAAGATGACAGTGAGGATGAGAACAGCAATAGAGGGGCCCCAGGGACCAGGAGGCTGGCGGCCATGGACATCTCAAGTGAAGAAGAGGAAGAAGAGGAACCAAGGCACTCTCGCAGTTCCAAGTCTCGCCACCTGGAGGTGGAGGTGCAGGTGCAGGGAGAGATTGCAGGACTGCGCAAGAAGAGGCAGCCAATCAACACTGCCCTCATAAGTCAAGGAGTTGGGGGATGGGAGCGTCATACTAAGGGGATTGGAGCTAAGCTCCTGCTACAGatggGGTTCCAACCAGGGAAAGGTCTTGGTAAGGCTTTGCAGGGAATCTCTGCTCCAGTGCAGGCACACTTGAGGAAGGGTCGTGGAGCTATCGGTGCGTACGGCCCGGAGAAGAAGACAAATATTGCAGACACAAAGGGCGACTCCGAGGAGGAAGAGGCGCGTGAGTTTGTTGAGAAGTTGTCCCATTGGAGGAAGGCAGACTCGGGCCAAAAGAAGGTGAAGGTGAAGTATGTATACAAGAGCGTAGACGAGGTGTTGGAGCAGGGCAATTCTCGGCCAATCAAGAGGGACCACAGTAACCTAAGCAAGGTGAAGGTGATTGACATGACGGGACCACAGAAACGAGTGCTAAGCGGATACCACGCCATTGCTGGACAGCAGCGCCCAGCGGATGAATGGGAGTATCGCAAGGACAAGACCTTCCACAACTTCTCCTTGCCTGAGCTACAACACAACTTGAACCTTTTGATGGACATGTGTGAGCAGGATATAATTCAGAACAACCAGAAGCTGAAGTATGCAAGTGACCGTCTCGTGTCTCTGGAGCATGAAGAACAGTCATTATCAACAGGGGTGGAGCTCGAGAAGACCCATATCAAGACCCTGGAAGGTGTCTTAGATATAATCCAGAACATGATAAACAAGAGTGACAACAAGGAGGACTCTCTGACTCTGGACCAGGCCGCAGAGGCCTTCAAGGAGCTGCAAGAAAAGTTCTATGAGGAATATCGTCTTTATGAGCTAGGGGAGTTGGCTGTGAGTTTGGTAGCACCCCTTGTCAAGGAGAAACTTAGCACTTGGAGACCCTTGGAGAGCCCCACAGAACCATTGAACCTCTTCACACAGTGGCGGGAGATACTTCAGGTTGACCAGGGGGCTCTCTCGATTACACAAGACCCCTACCACAAGCTGCTCTGGGAGTCTTGGATGCCGAGTCTACGAATCACTGTCAGCACTTGGAATTGCCGCGTGTGTGAGCCTCTGGTGGACTTGATCCAAGTATGGATCCCTCTGCTGCCAGGATGGATACTAGACAACATCCGGGAACAGCTTGTACTGCCCCGGATAACAAAAGAGGTGGAGGACTGGAACCCCATGACTGATACAGTACCTATCCATGCCTGGATACACCCTTGGCTGCCGCTTTTGGGTGTGCGGCTCGAAACAAGTGTGTTCCCGATGATCAGACATAAGCTGAGCAAGGCGCTGGTTAGCTGGCATCCATCTGACCGCTCGGCCCGCCTTATGCTGCTTCCATGGCACAGGGTGTTCTCCCGAGGCGAGATGGAGGCTTTCCTAGTGAAGAACATTCTCCCCAAACTGCAGCTGGCCCTACAGGAGCTGGTCATAAACCCTCACGAGCAACATCTAGAGCAGTGGAATTGGGTCATGGAATGGAAAGACCTCCTACCTCTACACTCCCTTTCTGGGGTCCTTGAAAAACACTTCTTCCCTAAGTGGTTGCAGGTGCTTACTTTGTGGCTCAACCACTCCCCCAACTATGACGAGATCACCCACTGGTACATGGGCTGGAAGAATATGGTCTCCGAGAGCCTTCGCGCCCAGCCTGGTATCAAGGAACAGTTCAACAAGGCGCTAGAGCTGATGAACCGGGCAGTGAGCTCTGGTGGACAGTCAGGGAACCAGCAGCCAGGAGCAGTTGAGTCTGTTTCTTATCTGACCAACATCGAACAGAGCCAACTCCCAGGACAAAGGGTTCGGGACAGAGAGTCTCGATATGAGCTCTTGGCGGAGGCGGTGAGGACAGCAAGTCAGGTGCCCCAGGGGTTCAAGGAGCTAATACAGAAACGCTGCGAAGAGCAAGGACTTCTCTTCGTCCCTCTCACCAACAGGTATCGTGAGGGCAAACAGATCTACCGTTGCGGTAACATACAGCTCTATGTTGACCGTAACGTAGCATTTGTCAGCGACAACAGCGGGGCGAGTTGGAACCCCAAGTCACTCAACGCAGTCCTGGACATGGCTTCGTAA
- Protein Sequence
- MADEEVMKFEITDYDLDNEFNINRPTRKISKNQQIYGIWADDSDGEEDASGPSRPSFKGSSRGKANYAAPVSFVAGGVHQAGKKKEPENKKEKKSDDEDDSEDENSNRGAPGTRRLAAMDISSEEEEEEEPRHSRSSKSRHLEVEVQVQGEIAGLRKKRQPINTALISQGVGGWERHTKGIGAKLLLQMGFQPGKGLGKALQGISAPVQAHLRKGRGAIGAYGPEKKTNIADTKGDSEEEEAREFVEKLSHWRKADSGQKKVKVKYVYKSVDEVLEQGNSRPIKRDHSNLSKVKVIDMTGPQKRVLSGYHAIAGQQRPADEWEYRKDKTFHNFSLPELQHNLNLLMDMCEQDIIQNNQKLKYASDRLVSLEHEEQSLSTGVELEKTHIKTLEGVLDIIQNMINKSDNKEDSLTLDQAAEAFKELQEKFYEEYRLYELGELAVSLVAPLVKEKLSTWRPLESPTEPLNLFTQWREILQVDQGALSITQDPYHKLLWESWMPSLRITVSTWNCRVCEPLVDLIQVWIPLLPGWILDNIREQLVLPRITKEVEDWNPMTDTVPIHAWIHPWLPLLGVRLETSVFPMIRHKLSKALVSWHPSDRSARLMLLPWHRVFSRGEMEAFLVKNILPKLQLALQELVINPHEQHLEQWNWVMEWKDLLPLHSLSGVLEKHFFPKWLQVLTLWLNHSPNYDEITHWYMGWKNMVSESLRAQPGIKEQFNKALELMNRAVSSGGQSGNQQPGAVESVSYLTNIEQSQLPGQRVRDRESRYELLAEAVRTASQVPQGFKELIQKRCEEQGLLFVPLTNRYREGKQIYRCGNIQLYVDRNVAFVSDNSGASWNPKSLNAVLDMAS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01450595; iTF_01446607; iTF_01448569;
- 90% Identity
- iTF_01446607; iTF_01450595; iTF_01448569;
- 80% Identity
- -