Tdou007579.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Timema douglasi
Gene Symbol
TFIP11
Assembly
GCA_901482245.1
Location
CABEEJ010000416.1:132735-153247[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-96 8.4e-92 310.0 19.1 1 275 412 678 412 678 0.97
2 2 0.12 5.4e+03 -1.0 0.0 157 189 690 721 683 728 0.72

Sequence Information

Coding Sequence
ATGGCAGATGAAGAGGTGATGAAGTTTGAGATCACCGACTATGATCTCGACAATGAATTCAACATAAACAGGCCAACTCGCAAGATCAGTAAAAACCAGCAGATTTACGGTATCTGGGCTGATGACAGCGATGGAGAAGAAGATGCCAGTGGCCCCAGTAGGCCCAGTTTCAAGGGTTCGAGCAGAGGAAAAGCCAACTATGCTGCTCCTGTGAGTTTTGTGGCAGGAGGAGTGCATCAGGCGGGCAAGAAGAAAGAACCCGAGAATAAAAAGGAGAAAAAGAGTGATGATGAAGATGACAGTGAGGATGAGAACAGCAATAGAGGGGCCCCAGGGACCAGGAGGCTGGCGGCCATGGACATCTCAAGCGAGGAAGAGGAAGAAGAGGAACCAAGGCACTCTCGCAGTTCCAAGTCTCGCCACCAGGAGGTGGAGGTGCAGGGAGAGATTGCAGGACTGCGCAAGAAGAGGCAGCCAATCAACACTGCCCTCATAAGTCAAGGAGTTGGGGGATGGGAGCGTCATACTAAGGGCATTGGGGCTAAGCTGCTTCTACAGatgGGTTTCCAACCAGGAAAAGGTCTTGGTAAGGCTTTGCAGGGAATCTCTGCTCCAGTGCAGGCACACTTGAGGAAGGGTCGTGGAGCTATCGGTGCGTACGGCCCAGAGAAGAAGACAAATATTGCAGACACAAAGGATGACTCCGAGGAGGAAGAGGCGCGTGAGTTTGTTGAGAAGTTGTCCCATTGGAGGAAGGCCGATTCGGGCCAAAAGAAGGTGAAGGTGAAGTATGTATACAAGAGCGTAGACGAGGTGTTGGAGCAGGGCAAGTCTCGGCCAATCAAGAGGGACCACAGTAACCTAAGCAAGGTGAAGGTGATTGACATGACGGGACCACAGAAACGAGTGCTAAGCGGATACCACGCCATTGCTGGACAGCAGCGCCCAGCGGATGAATGGGAGTATCGCAAGGACAAGACCTTCCACAACTTCTCCTTGCCTGAACTACAACACAACTTGAACCTTTTGATGGACATGTGTGAGCAGGATATAATTCAGAATAACCAGAAGCTGAAGTATGCAAGTGACCGTCTCGTGTCTCTGGAGCATGAAGAACAGTCATTATCAACAGGGGTGGAGCTCGAGGCGACCCATATTAAGACCCTGGAAGGTGTCTTGGATATAGTCCAGAACATGATAAACAAGAGTGACAACAAGGAGAACTCTCTGACTCTGGACCAGGCCGCAGAGGCCTTCAAGGAGTTGCAAGAAAAGTTCTACGAGGAATATCGTCTTTACGAGCTAGGAGAGTTGGCTGTGAGTTTGGTAGCGCCCCTTGTCAAGGAGAAACTTAGCACTTGGAGACCCTTGGAGAGCCCCACAGAACCCCTGAACCTCTTCACACAGTGGCGGGAGATACTCCAGGCTGACCAGGGGGCTCTCTCGGTTACACAAGACCCCTACCACAAGCTGCTCTGGGAGTCTTGGATGCCGAGTCTACGGATCACTGTCAGTACTTGGAATTGCCGCGTGTGTGGGCCCCTGGTGGACTTGATCCAAGTATGGATCCCTCTGCTGCCAGGATGGATACTAGACAACATCCGGGAACAACTTGTACTGCCCCGGATAACAAAAGAGGTGGAGGACTGGAACCCTATGACTGATACAGTCCCTATCCATGCCTGGATACACCCTTGGCTGCCGCTTTTGGGTGTCCGGCTCGAAACAAGTGTGTTCCCAATGATCAGACATAAGCTGAGCAAGGCGCTGGTTAGCTGGCATCCGTCTGACCGCTCGGCCCGCCTTATGCTGCTTCCATGGCACAGGGTGTTCTCCCGAGGCGAGATGGAGGCTTTCCTAGTGAAGAACATTCTCCCCAAACTGCAGCTGGCCCTACAGGAGCTGGTCATAAACCCTCACGAGCAACATCTAGAGCAGTGGAATTGGGTCATGGAATGGAAAGACCTCCTACCGCTACACTCCCTTTCTGGGGTCcttgaaaaacactttttccctAAGTGGCTGCAGGTGCTTACTTTGTGGCTCAACCACTCCCCCAACTATGACGAGATCACCCACTGGTACATGGGCTGGAAGAATATGGTCTCCGAGAGCCTTCGCGCCCAGCCTGGTATCAAAGAACAGTTCAACAAGGCGCTAGAGCTGATGAACAGGGCAGTGAGCTCTGGTGGACAGTCAGGGAACCAGCAGCCAGGAGCAGTTGAGTCTGTTTCTTACCTGACCAACATCGAACAAAGCCAACTCCCAGGACAGAGGGTTAGGGACAGAGAGTCTCGATATGAGCTCTTGGCGGAGGCGGTGAGGACAGCAAGTCAGGTGCCCCAGGGGTTCAAGGAGCTAATACAGAAACGCTGCGAGGAGCAAGGACTACTCTTCGTCCCTCTCACCAACAGGTATCGCGAGGGCAAACAGATCTACCGTTGCGGTAACATACAGCTCTATGTTGACCGTAACGTAGCATTTGTCAGCGACAACAGTGGGGCGAGTTGGAACCCCAAGTCACTCAACGCAGTCCTGGACATGGCTTCGTAA
Protein Sequence
MADEEVMKFEITDYDLDNEFNINRPTRKISKNQQIYGIWADDSDGEEDASGPSRPSFKGSSRGKANYAAPVSFVAGGVHQAGKKKEPENKKEKKSDDEDDSEDENSNRGAPGTRRLAAMDISSEEEEEEEPRHSRSSKSRHQEVEVQGEIAGLRKKRQPINTALISQGVGGWERHTKGIGAKLLLQMGFQPGKGLGKALQGISAPVQAHLRKGRGAIGAYGPEKKTNIADTKDDSEEEEAREFVEKLSHWRKADSGQKKVKVKYVYKSVDEVLEQGKSRPIKRDHSNLSKVKVIDMTGPQKRVLSGYHAIAGQQRPADEWEYRKDKTFHNFSLPELQHNLNLLMDMCEQDIIQNNQKLKYASDRLVSLEHEEQSLSTGVELEATHIKTLEGVLDIVQNMINKSDNKENSLTLDQAAEAFKELQEKFYEEYRLYELGELAVSLVAPLVKEKLSTWRPLESPTEPLNLFTQWREILQADQGALSVTQDPYHKLLWESWMPSLRITVSTWNCRVCGPLVDLIQVWIPLLPGWILDNIREQLVLPRITKEVEDWNPMTDTVPIHAWIHPWLPLLGVRLETSVFPMIRHKLSKALVSWHPSDRSARLMLLPWHRVFSRGEMEAFLVKNILPKLQLALQELVINPHEQHLEQWNWVMEWKDLLPLHSLSGVLEKHFFPKWLQVLTLWLNHSPNYDEITHWYMGWKNMVSESLRAQPGIKEQFNKALELMNRAVSSGGQSGNQQPGAVESVSYLTNIEQSQLPGQRVRDRESRYELLAEAVRTASQVPQGFKELIQKRCEEQGLLFVPLTNRYREGKQIYRCGNIQLYVDRNVAFVSDNSGASWNPKSLNAVLDMAS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01445671;
90% Identity
iTF_01445671;
80% Identity
-