Tcit010813.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tiliacea citrago
Gene Symbol
clz9
Assembly
GCA_963921375.1
Location
OY992783.1:13909717-13911684[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7e-10 4.1e-07 31.1 0.0 1 40 14 53 14 56 0.94

Sequence Information

Coding Sequence
ATGGTCCGGAATTATAAACGAAAAACGGAAAACAAATATACCCAGGAAAACTTGTTAAAAGCTCTAGAAGATGTTAGAAGCAATAAATTAAACACCTATCAAGCAGCTGACGTCTACGGAGTTCCGAGGTTTACTTTGGTTCACCGATTACGCGGATCACGAGGAGTGGTAAAATCATATCGCGGTAGGCCTACTGTATTCACTCAATACACAGAAACAAAAATAGCCGGATATATTCACATAATGGAAAAAACTGGTTTTCCTTTAACGGTGCAGGAGGTCAAAGTTTTGATATCGGATTACATAAAAAGAAATGGCTTTATTACGCCGTTCAAAAATGACATCCCTGGCGATGACTGGTGCAAGGGGTTTAGGAGCAGAAATAAtctatcattaaaaaaaccCCAATCCGTGGAGACCGCAAGGCGAAAGGCTTGCAATCCTTTCATTGTATAtaactattatgatttattaCAAAAGACGCAACAAGAATTAGAACTAACtgcaaaacttaaaaatatatacaacttAGATGAGACCAGTTTTTGCTGTGATCCATCGAAAGCTAAAGTAATGGGACAGGTCGGATACCGATCGACAAGAACTACTAGCTCACCTGGCAGAGACAATACCACCGTCCTTTTGGCTGCAAATGCCCTGGGTGGAAAGATTCCAcctttaataattttccagggtAAACATCTTTGGAGTGAATGGGTATACCAAGATGAAACAGTTAAAACAGCTTACGCCGTAAGCAGAAAAGGATGGATGGAAACAtctatatttgaaaaatatattaaagacgTTTTCATTCCCGCGATCGGCTCTGAAAGACCGGTGCTCCTCATATATGATGGGCATTCAACTCATTGTGATCTAAGTGTAATAGAACTTGCTGTAGCAAATGAGATAACGATCCTAAAATTACCACCGCACTCATCCCATATACTGCAACCTTTGGATTGCAGCACCATGAAACCTTTAAAAGATCGTTGGGAGAGTGAGCTTATCAAATGGCAAAGACTTCATGTAGGGGCTAAATTGCCTAAGTCAGAATTCGCGAGAATTCTTACAAACATATGGGACAATTTAAACCCAGTAATTATCGAAAATGGCTTTATTAAGACGGGATCATTTCCTGCTAACCCAAACGCCATCTCGAAAGAAAATTTTGATGCGTTGTCATGGTCTAAATGGGAATATCATCTACAGCAACAGTCTTTAGAACTAGATCAAGTACAAGAGCAACCAGAAGAACAGATATCAAATGGACCAGATCGAGTTGAAGAGCAACCAGAAGACCAGATTTCAAATGTCGTCAGCCGAAATGATTATGACCCACAATTGCCAAGCCTTTTAGGTttggttataaaattattaaataaacaaatcattGGTGGTATTCAAATCAATGACAAAGAAGTAGAGGATATAGATGAAAAAGATGGTTACTTTAAACAAAGGGACCGAGACAATTGTGAAGAAACTGTAGAAGTCCCTTGTGTGAAGTCCTGGACTGTAAAAGATCCTAAAACTTTTACACTGCCACCAAAAATAAACGAGACTAAAATAGCTTGGTCATCTGGAGTAAAAATACTGGATTGTAAAGTAGTTAAGCCAATGGAAAACACAAATAGTGTGGAGGAACGTGTATCTTTTGaagaattagttttaaaaacaatagcTCGCAATGATCCACCAAGAAATCCGAAGAAACGCATTAATGGTGCTGAAATATTAACTTCTAAGGATGTAATGAGTCGTGTTCGAaaagagaaagaagaaaaagaagaagcgAAATTAAGAAAAGCACAAAatagtcttaaaaaaaataacaaatctaaTAATCGTAAAAAATCCCACGAAAACAAAAGACAACAAAAATTAACAGAAAAACCACAAGACGTGAAATATCGGATAGTGACAGCGTGTGCTCCTACACGTCAAACAGCTCTACAGAACTAG
Protein Sequence
MVRNYKRKTENKYTQENLLKALEDVRSNKLNTYQAADVYGVPRFTLVHRLRGSRGVVKSYRGRPTVFTQYTETKIAGYIHIMEKTGFPLTVQEVKVLISDYIKRNGFITPFKNDIPGDDWCKGFRSRNNLSLKKPQSVETARRKACNPFIVYNYYDLLQKTQQELELTAKLKNIYNLDETSFCCDPSKAKVMGQVGYRSTRTTSSPGRDNTTVLLAANALGGKIPPLIIFQGKHLWSEWVYQDETVKTAYAVSRKGWMETSIFEKYIKDVFIPAIGSERPVLLIYDGHSTHCDLSVIELAVANEITILKLPPHSSHILQPLDCSTMKPLKDRWESELIKWQRLHVGAKLPKSEFARILTNIWDNLNPVIIENGFIKTGSFPANPNAISKENFDALSWSKWEYHLQQQSLELDQVQEQPEEQISNGPDRVEEQPEDQISNVVSRNDYDPQLPSLLGLVIKLLNKQIIGGIQINDKEVEDIDEKDGYFKQRDRDNCEETVEVPCVKSWTVKDPKTFTLPPKINETKIAWSSGVKILDCKVVKPMENTNSVEERVSFEELVLKTIARNDPPRNPKKRINGAEILTSKDVMSRVRKEKEEKEEAKLRKAQNSLKKNNKSNNRKKSHENKRQQKLTEKPQDVKYRIVTACAPTRQTALQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00745572; iTF_01246759; iTF_01093000; iTF_01246754; iTF_00373860; iTF_00375104; iTF_00445048; iTF_00745575; iTF_00745569; iTF_00745570; iTF_00745571; iTF_00745574; iTF_00745568;
90% Identity
iTF_00745570;
80% Identity
-