Gspa008304.1
Basic Information
- Insect
- Globia sparganii
- Gene Symbol
- clz9
- Assembly
- GCA_949316385.1
- Location
- OX438657.1:13430010-13436030[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-10 8.3e-08 32.9 0.0 3 40 16 53 14 56 0.92
Sequence Information
- Coding Sequence
- ATGGTCCGGAATTATAaacggaaaacagaaataaaatattcccAGGAACATTTGTTAAAAGCACTAGAAGATGTTAggcacaataaattaaacaccTATCAAGCGGCTGAAGTCTACGGAATTCCGAGGTCTACTTTGGTTCACCGATTACGCGGATCACGAGGAGTCGTAAAATCATATCGCGGTAGGCCTACTGTTTTCACCAAAgatacagaaacaaaaatagCTGGGTATATTCACGTAATGGAAAAAACTGGTTTTCCTTTAACGGTTCAAGAGGTCAAAGTTTTGATATCCGATTACATCAAAAGAAATGGCTTTATTACGCCGTTCAAAAACGACATCCCTGGCGATGACTGGTGCAAGGGGTTTAGGACCAGAAATAATCTATCCTTAAAAAAACCCCAATCCATGGAGACCGCAAGGCGAAAGGCTTGCAATCCTTTCATTGTATATAACTATTACGATTTATTACAAAAGACGCAGCAAGAATTAGAACTAACTGCAAAACCTCAAAATATATACAATTTAGATGAGACAAGTTTTTGTTGTGATCCATCGAAAGCTAAAGTAATGGGACAGGTCGGATACCGATCGACAAGAACTACTAGCTCACCTGGCAGAGACAATACCACCGTCCTTTTGGCTGCAAATGCCCTGGGTGGAAAGATTCCACCCTTAATAATTTTCCAGGGTAAACATCTTTGGAGTGAATGGGTATACAAAGATGAAACAGTTAAAACAGCTTACGCAGTAAGCAGAAAAGGATGGATGGAAACATCTATATTTGAAAAGTATATTAAAGACGTTTTCATTCCCGCGATCGGCTCTGAAAGACCAGTGCTCCTCATATATGATGGGCATTCAACTCATTGCGATCTAAGTGTAATAGAACTTGCTGTAGCAAATGGGATTACGATCCTAAAATTACCACCGCACTCATCCCATATACTACAACCTTTGGATTGCAGCACCATGAAACCTTTAAAAGATCGTTGGGAGAGTGAGCTAATCAAATGGCAAAGACTTCATGTAGGGGCTAAATTGCCTAAATCAGAATTCGCGAGAATTCTTACAAACATATGGGAtaatttaaattcagtaattATCGAAAATGGCTTTATTAAGACGGGATCATTTCCTGCTAACCCAAACGCCATCTCGAAAGACTATTTTGATGCGTTGTCATGGTCTAAATGGGAACATCATCTACAGCAACAGTCTTTAGGACTAGATCAAGGACAAGAGCAACCAGAAGAACAGATATCAAATGGACTAGATCGAGTTGAAGAGCAACCAGAAGAACAGATTTCAAATGTCGTCAACCGAAATGATTATGACCCACAATTGCCAAGCCTTTTAAGtttagttataaaattattaaataaacaaattattggtGGTATTGAAATCAAAGACAAAGAAGTAGAGGCTATAGAGGAAAAAGATAGCTATTTTAAACAAAAGGACCGAGACAATTGTGAAGAAACTGTAGAAGCCCCTTGTGTGAAGTCCTGGATTGTAAAAGATACTAAAACTTTTACACTGCCACCAAAAATAAACCAGACTAAAACAGCTTGGTCATCTGGAGTAAAAATATTGGAATGCAAAGTGGTAAAGCCAATGGAAAACCAAAATAAGAATTTTGCAGCAAAGATGCTGAATAGTGGTAGAGATAAAATGATGAAGATGATAAGAGGTGATTGA
- Protein Sequence
- MVRNYKRKTEIKYSQEHLLKALEDVRHNKLNTYQAAEVYGIPRSTLVHRLRGSRGVVKSYRGRPTVFTKDTETKIAGYIHVMEKTGFPLTVQEVKVLISDYIKRNGFITPFKNDIPGDDWCKGFRTRNNLSLKKPQSMETARRKACNPFIVYNYYDLLQKTQQELELTAKPQNIYNLDETSFCCDPSKAKVMGQVGYRSTRTTSSPGRDNTTVLLAANALGGKIPPLIIFQGKHLWSEWVYKDETVKTAYAVSRKGWMETSIFEKYIKDVFIPAIGSERPVLLIYDGHSTHCDLSVIELAVANGITILKLPPHSSHILQPLDCSTMKPLKDRWESELIKWQRLHVGAKLPKSEFARILTNIWDNLNSVIIENGFIKTGSFPANPNAISKDYFDALSWSKWEHHLQQQSLGLDQGQEQPEEQISNGLDRVEEQPEEQISNVVNRNDYDPQLPSLLSLVIKLLNKQIIGGIEIKDKEVEAIEEKDSYFKQKDRDNCEETVEAPCVKSWIVKDTKTFTLPPKINQTKTAWSSGVKILECKVVKPMENQNKNFAAKMLNSGRDKMMKMIRGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01440957;
- 90% Identity
- iTF_00745570;
- 80% Identity
- iTF_00745568;