Dbru015162.1
Basic Information
- Insect
- Diarsia brunnea
- Gene Symbol
- clz9
- Assembly
- GCA_949774965.1
- Location
- OX459007.1:5779953-5789164[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.3e-12 2.2e-09 37.9 0.0 2 42 15 55 14 58 0.92
Sequence Information
- Coding Sequence
- ATGGTCCGGAATTATAAACGgagaacagaaataaaatattcccaGGAAAATTTGTTAAAAGCATTGGAAGCTGTTAGGACCGATGAATTGAACACCTATCAAGCGGCTGACGTTTACGGAATTCCCAGGTCTACTTTGGTCCACCGATTACGCGGATCACGAGGAGTGAAAAAATCATACCGTGGTAGGCCTACTGTTTTCACCAAAGATACTGAAACAAAAATAGCCGGCTATATTCACGTACTAGAAAAAACTGGTTTTCCTTTAACGGTACAAGAAGTTAAAGTTTTGGTATCCGAGTACATCAAAAGAAATGGCTTTATTACGCCGTTCAAAAATGATATCCCTGGCGATGACTGGTGCAAGGGGTTTAGGAGCCGAAATAATCTCTCCTTAAAAAAACCTCAATCCGTGGAGAACGCAAGACGAAAGGCTTGCAATCCTTTCATTGTATACCACTATTACGATTTATTACTAAAGACGCAGCAAGAATTAGAACTAACAGCAAAACctcaaaatatatataacttAGACGAGACCAGTTTTTGCTGTGATCCATCGAAAGCTAGAGTAATGGGACAGGTCGGATACCGTTCGACGAGAACTACTAGCTCACCTGGCAGAGACAATACCACCGTCCTTTTGGCTGCTAATGCCTTGGGTGGAAAGATTCCACCCTTAATAATTTTTCAGGGTAAACATCTTTGGAGTGAATGGGTATACCAAGATGAAACAGCCAAAACAGCATATGCAGTGAGCAGAAAAGGATGGATGGAAACATCTATATTTGAAAAGTATATTAAAGATGTTTTCATTCCCGCCATCGGCTCTGAAAGACCGGTGCTCCTCATATACGATGGGCATTCAACTCATTGCGATCTAAGCGTTATAGAACTTGCTGCAGCAAATGGGATAACTATCCTTAAATTACCACCACACTCATCTCATATACTACAACCTTTGGATTGCAGCACCATGAAACCTTTAAAAGATCGTTGGGAAAGTGAGCTCATCAAATGGCAAAGACTTCATGTGGGAGCTAAATTGCCTAAACCAGAATCCGCGAGAATTCTTACAAACATATGGGACAATTTAAACCCAGTTATTATAGAAAATGGTTTTATTAAGACGGGATCATTTCCTGCTAACCCAAACGCAATTTCGAAAGAAAATTTCGATGCATTATCATGGTCTAGATGGGAATATCATCTACAGCAGCAGTCTTTGGGACTAAATCGAGTAGAAGAGCGTCCAGGAACTCCTACAAACATAAGGGACCATTTAAACCCAGAAAATGGTTATATTAATACGGGATCATTTCCTACTCAGCCAAAAGCCATCTCCAAAGAACATTTTGATGCATTGTCATGGTCTAAATGGGAATATCATCAACAACAGCAGTCTTTAGGACTAAATCGAGTAGAAGAGCGTCCAGGAACTCCTACAAACATAAGGGACCATTTAAACCCAGAAAATGGTTATATTAATACGGGATCATTTCCTGCTCAGCCAAAAGCCATCTCCAAAGAACATTTTGATGCATTGTCATGGTCTAAATGGGAATATCATCAACAACAGCAGTCTTTAGGACTAGATCGAGAAGAAGAGCAACCAGAAGAACAGATACCAAATGTCGTTACCTGTAATTACTATGACCCACAATTACCAAGTcttttaaatttagttataagagtattaaataaaaaaatcataggtAATATTCAAatcaaagaaaaagaagtaGATATAGAGGAAGAAGATCTAGATTTTAAACAAAGGGACCGAGATAATTGTGAAGATATTGTAGAAACCCCTTATGTGAAATCCTGGACTGTTAAAGATCCTAAAGCTTTTATACTGCCacctaaaataaacaacactaaCGAGACTAATACAGCTTGGTCATCTGGAGTAAAAATACTGGAATGCAAACTGGTCAACAATATTATCACCCATCCACCTGAAGCGAACAAGTACGAGAAGTTGAAGACTGAACTCGTACGTCGGTTGTCAGCGTCGCAAGAAAAGCGAATACAACAGCTTTTACTACACGAGGAGTTAGGTGATCGATAG
- Protein Sequence
- MVRNYKRRTEIKYSQENLLKALEAVRTDELNTYQAADVYGIPRSTLVHRLRGSRGVKKSYRGRPTVFTKDTETKIAGYIHVLEKTGFPLTVQEVKVLVSEYIKRNGFITPFKNDIPGDDWCKGFRSRNNLSLKKPQSVENARRKACNPFIVYHYYDLLLKTQQELELTAKPQNIYNLDETSFCCDPSKARVMGQVGYRSTRTTSSPGRDNTTVLLAANALGGKIPPLIIFQGKHLWSEWVYQDETAKTAYAVSRKGWMETSIFEKYIKDVFIPAIGSERPVLLIYDGHSTHCDLSVIELAAANGITILKLPPHSSHILQPLDCSTMKPLKDRWESELIKWQRLHVGAKLPKPESARILTNIWDNLNPVIIENGFIKTGSFPANPNAISKENFDALSWSRWEYHLQQQSLGLNRVEERPGTPTNIRDHLNPENGYINTGSFPTQPKAISKEHFDALSWSKWEYHQQQQSLGLNRVEERPGTPTNIRDHLNPENGYINTGSFPAQPKAISKEHFDALSWSKWEYHQQQQSLGLDREEEQPEEQIPNVVTCNYYDPQLPSLLNLVIRVLNKKIIGNIQIKEKEVDIEEEDLDFKQRDRDNCEDIVETPYVKSWTVKDPKAFILPPKINNTNETNTAWSSGVKILECKLVNNIITHPPEANKYEKLKTELVRRLSASQEKRIQQLLLHEELGDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01440957;
- 90% Identity
- -
- 80% Identity
- -