Basic Information

Insect: Globia sparganii
Gene Symbol: clz9
Assembly: GCA_949316385.1
Location: OX438671.1:3634916-3638080[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.3e-10 9.2e-08 32.7 0.0 3 40 16 53 14 56 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.3e-10	9.2e-08	32.7	0.0	3	40	16	53	14	56	0.92

Sequence Information

Coding Sequence: ATGGTCCGTAATTATAaacggaaaacagaaataaaatattcccAGGAACATTTGTTAAAAGCACTAGAAGATGTTAggcacaataaattaaacaccTATCAAGCGGCTGAAGTCTACGGAATTCCGAGGTCTACTTTGGTTCACCGATTACGCGGATCACGAGGAGTCGTAAAATCATATCGCGGTAGGCCTACTGTTTTCACCAAAGATACAGAAACTAAAATAGCTGGGTATATTCACGTAATGGAAAAAACTGGTTTTCCTTTAACGGTTCAAGAGGTCAAAGTTTTGATATCCGATTACATCAAAAGAAATGGCTTTATTACGCCGTTCAAAAACGACATCCCTGGCGATGACTGGTGCAAGGGGTTTAGGACCAGAAATAATCTATCCTTAAAAAAACCCCAATCCATGGAGACCGCAAGGCGAAAGGCTTGCAATCCTTTCATTGTATATAACTATTACGATTTATTACAAAAGACGCAGCAAGAATTAGAACTAACTGCAAAACCTCAAAATATATACAATTTAGATGAGACAAGTTTTTGTTGTGATCCATCGAAAGCTAAAGTAATGGGACAGGTCGGATACCGATCGACAAGAACTACTAGCTCACCTGGCAGAGACAATACCACCGTCCTTTTGGCTGCAAATGCCCTGGGTGGAAAGATTCCACCCTTAATAATTTTCCAGGGTAAACATCTTTGGAGTGAATGGGTATACAAAGATGAAACAGTTAAAACAGCTTACGCAGTAAGCAGAAAAGGATGGATGGAAACATCTATATTTGAAAAGTATATTAAAGACGTTTTCATTCCCGCGATCGGCTCTGAAAGACCAGTGCTCCTCATATATGATGGGCATTCAACTCATTGCGATCTAAGTGTAATAGAACTTGCTGTAGCAAATGGGATTATGATCCTAAAATTACCACCGCACTCATCCCATATACTACAACCTTTGGATTGCAGCACCATGAAACCTTTAAAAGATCGTTGGGAGAGTGAGCTAATCAAATGGCAAAGACTTCATGTAGGGGCTAAATTGCCTAAATCAGAATTCGCGAGAATTCTTACAAACATATGGGATAATTTAAATCCAGTAATTATCGAAAATGGCTTTATTAAGACGGGATCATTTCCTGCTAACCCAAACGCCATCTCGAAAGACAATTTTGATGCGTTGTCATGGTTTAAATGGGAACATCATCTACAGCAACAGTCTTTAGGACTAGATCAAGTACAAGAGCAACCAGAAGAACAGATATCAAATGGACTAGATCGAGTTGAAGAGCAACCAGAAGAACAGATTTCAAATGTCGTCAACCGAAATGATTATGACCCACAATTGCCAAGCCTTTTAAGtttagttataaaattattaaataaacaaattattggtGGTATTGAAATCAAAGACAAAGAAGTAGAGGCTATAGAGGAAAAAGATAGCTATTTTAAACAAAAGGACCGAGACAATTGTGAAGAAACTGTAGAAGCCCCTTGTGTGAAGTCCTGGATTGTAAAAGATACTAAAACTTTTACACTGCCACCAAAAATAAACCAGATTAAAACAGCTTGGTCATCTGGAGTAAAAATATTGGAATGCAAAGTGAAGTGGGATATGAAGCGTAATCGCCCTACTGCTTCTGTTGGTTGTGGAATACGTCCACCTGGCAGGAGTGAAGAAGAGCAAAACCATAATATTAGTGAAGATGAAGAATTCCCGCCGCCACCTGCTAGAAAACTACTCAAAACCATACTGGAAAATGAAGTGGGTAGGGCGATACACGAACTCAACGACGATATTTTAACCGCTCAACCATTTCAAAGGCCATCGTGCGGCGTCCCTTAA
Protein Sequence: MVRNYKRKTEIKYSQEHLLKALEDVRHNKLNTYQAAEVYGIPRSTLVHRLRGSRGVVKSYRGRPTVFTKDTETKIAGYIHVMEKTGFPLTVQEVKVLISDYIKRNGFITPFKNDIPGDDWCKGFRTRNNLSLKKPQSMETARRKACNPFIVYNYYDLLQKTQQELELTAKPQNIYNLDETSFCCDPSKAKVMGQVGYRSTRTTSSPGRDNTTVLLAANALGGKIPPLIIFQGKHLWSEWVYKDETVKTAYAVSRKGWMETSIFEKYIKDVFIPAIGSERPVLLIYDGHSTHCDLSVIELAVANGIMILKLPPHSSHILQPLDCSTMKPLKDRWESELIKWQRLHVGAKLPKSEFARILTNIWDNLNPVIIENGFIKTGSFPANPNAISKDNFDALSWFKWEHHLQQQSLGLDQVQEQPEEQISNGLDRVEEQPEEQISNVVNRNDYDPQLPSLLSLVIKLLNKQIIGGIEIKDKEVEAIEEKDSYFKQKDRDNCEETVEAPCVKSWIVKDTKTFTLPPKINQIKTAWSSGVKILECKVKWDMKRNRPTASVGCGIRPPGRSEEEQNHNISEDEEFPPPPARKLLKTILENEVGRAIHELNDDILTAQPFQRPSCGVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01440957;
90% Identity: iTF_00745570;
80% Identity: -