Tpar020312.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tetramorium parvispinum
Gene Symbol
-
Assembly
GCA_011638315.1
Location
VBVR01003855.1:2346-12023[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 32 7.4e-06 0.00086 20.2 1.0 1 23 231 253 231 253 0.98
2 32 0.011 1.2 10.2 3.7 1 23 276 299 276 299 0.96
3 32 0.00072 0.084 13.9 0.5 2 23 306 328 305 328 0.96
4 32 0.094 11 7.3 0.4 1 21 348 368 348 369 0.95
5 32 0.0037 0.43 11.7 0.2 2 23 467 488 466 488 0.95
6 32 0.0074 0.86 10.7 0.5 2 23 495 517 494 517 0.91
7 32 0.00022 0.026 15.5 0.2 1 23 586 609 586 609 0.96
8 32 0.059 6.9 7.9 2.5 1 23 615 638 615 638 0.95
9 32 0.14 17 6.7 1.5 1 23 651 673 651 673 0.97
10 32 4e-05 0.0047 17.8 0.9 3 23 718 739 717 739 0.96
11 32 3.4 4e+02 2.3 0.4 1 23 771 794 771 794 0.92
12 32 0.0055 0.64 11.1 0.8 2 23 801 824 800 824 0.94
13 32 1.1 1.2e+02 3.9 0.0 2 23 833 855 833 855 0.90
14 32 0.03 3.6 8.8 0.0 2 23 862 884 861 884 0.93
15 32 0.00011 0.012 16.5 3.2 1 23 892 914 892 914 0.97
16 32 0.022 2.5 9.3 0.8 2 23 950 973 949 973 0.94
17 32 0.00025 0.029 15.4 3.3 1 23 976 999 976 999 0.97
18 32 0.00081 0.095 13.8 0.1 2 23 1006 1028 1005 1028 0.95
19 32 0.0011 0.13 13.4 3.9 1 21 1055 1075 1055 1076 0.95
20 32 0.0032 0.37 11.9 1.8 2 23 1090 1111 1089 1112 0.93
21 32 0.42 49 5.2 1.1 1 23 1115 1138 1115 1138 0.94
22 32 0.031 3.6 8.8 2.1 2 23 1145 1168 1144 1168 0.90
23 32 3.6 4.2e+02 2.3 0.2 2 23 1176 1198 1176 1198 0.94
24 32 1.6 1.9e+02 3.3 0.0 2 23 1205 1227 1204 1227 0.91
25 32 0.27 31 5.8 2.7 2 23 1236 1258 1236 1258 0.96
26 32 0.81 95 4.3 0.5 2 23 1264 1286 1263 1286 0.91
27 32 0.02 2.3 9.4 0.1 1 23 1348 1371 1348 1371 0.95
28 32 0.0003 0.035 15.1 1.3 1 21 1398 1418 1398 1419 0.95
29 32 0.38 44 5.4 1.9 2 23 1520 1542 1519 1542 0.94
30 32 1.1 1.3e+02 3.9 0.4 2 23 1549 1571 1548 1571 0.94
31 32 0.82 96 4.3 2.5 1 23 1582 1604 1582 1604 0.97
32 32 0.012 1.5 10.0 0.1 1 21 1608 1628 1608 1629 0.93

Sequence Information

Coding Sequence
ATGGCGACGGAGCCGAGGAAATCTTACGACGAGCTGTGTCGCCTGTGCGCCTCCTACGACGCCGTCAGGATGCACATTTTCGGCCAGGAGGGCAAGAATCGTCAACTCGTCGACAAGATTCAGACGTGCCTGCCGTTCAAGATAATGGAAGATGATTGTTTGCCAAAAGTCCTGTGTTATCGATGCATGTACAACTTGGAAAATTTCTATGACTTTAGGACTGCGTGTGTTAACGCAGCTGCTTGGTTGGAAAGAAATAGGCCGAAGGAAGGCGCGAGCAATGACGGCGCAAATGACAGCGCACAATCCGGCGAGGTGCACGCGGAGCTTCTCaaaggaaaggaaaatatGCCAGTACTTATTCCGGAAGCACCCGTAGTCAATCCTAATGCGGCATTAGGTACACCCCCGAGGTTAAATTCGGATGGTGAAGCAGATCCCGAGATCGAGGAGATTCTCGATACAAGTGAAGGTACGGATGAAGCTACAGTAATCGACGATTCGGAAGATCGACGATCGGAATATGAGATGGCATATGAGATGGATATGGAGACGAATCCTAGCGACTTTTTGGAAATGACTCCAATGGTAACTGAGGAAAATGAAGAGGAGTGCGGTATGAACAACACGAGCGCCGCGGCCACTCAAGATACCGCGGTCTTTTCACATACGTCGCAACAACATGAAGTCTACGTCTGTTCTCTCTGCAACAAAGCGTTCAGTTCCAAAGGTCACTTATCCCTGCACGCGAGAATTCACGTGGGTGAAGGTGATGTGATCGGCGAAAGAGTAATCACCGACGATCATACTTCGTATCAACGACCGTATCAATGTGATCTTTGTCATAAATCGTACTCCACTGCGAAACACCGCTGGGGACACGTTTCTACGACACATCGGGGACATCCTGCAGTAACGTGTGCATATTGTTCTCGCATATACTCGACGCGATATAATCTCGATGAGCATATAAAATCGCGACACGCTGGTCTGCCGCCACCTCCAGAATTATCGGTTCCCCTTTCGCGCACGGAAACTCGTTATCAGTGCCAAACATGTCTGATGGTGTGTACAGATCTAGCAGATTTCAATGCGCATCGACAGATATGCAGCCAGGAGCAACGTACAGATCTGTTGGGACAAACTGAAGcgcaaaacaataaaattttcgccGATACGTCCGATATCTCGAGCGTAGAGTCGGATGACGAGAACAAAGACTTCAAGAACGCGGAGGCTAAATTGGCAAAAAATCCACAATTAACTATATTGAAACAAGCGCTGACTAAAGGAGACAgtttaaaacgaaattttgACGATGATGGCTCGACATCCAGCGGCAAGccaaaaaaaatagttaagtcagAAGAGGGCGAGACGAATCCTCAGAAGAGATGGTATTGTGAATCTTGTCCACAAAGTTTTACATCGGTGGATAGTTTGAAGGAACATGAGATTAGGCATGATGCCGAAAAGCCATTTATTTGCATACTATGCAAGAAAGATTTCGTTTTGAAATCTTCATTAATTAGGCACATTACAACGTCACATGGCGTTGATCCTACTCCTATCGTTGACAGTGAAAAGTATCTAAAAGCAACAGTAATGCCTCAGAATTGGAACGATCGGGTGGACAATGTTTACGAGCAAAGTGAGATGAAGGAATCACCGGAACTTTCATCGTCACCTGAGataaatttagaaaatgatgACAAAGATTACAAGAATCACGAGAATATAGAAATCGAAACGGTATTTGTATGTGAGACTTGTAAGAGAGATTTCAATGACCGAGCGTCATTATGGCTACATATACGAGCGATGCATAAAGAATATGCAGCATTTACCTGTGGAGTGTGTTTAAAGATGTGCTTTGATAACACGCAACTTCAAAATCATGTCTACATGTATCACGGAAGATCTAAGCTTTTAATATCGGAACAAAGAAGGTACAGTTGTACGATCTGCGGTAGACAGCATGATTCGAGGAAGAAGCTAATCACTCATGTCTCGATACATAACGTCGATCCTGCCTATGATCCTGCGAGTTTTGTAcaattaaatagtaattattacaatgaaaaCTTGAATGGAAATGAAGGAAATGAACAAGTATTAGATTTTGACGGAGAAGATGGTGAGAAGGTCGATTGTTACATTTGTTACAAATCTTTCCCGACTGAAGACCATCTGATACGACATCAAAGAAATGCTCATAAGTCTGACCAGATAGTTTCATTAGATGCTACGGGTAGTGGCAATACTCTTAGTGTCAATGGTAATGGTAATAGAGCGcaatatcatttattctttGTTTGCGAAGTATGCGGCAGTTCACATTCGAGTAAATGGGAACGCTGGTTGCATATCAACAATACACACAACAACGAATCTTCTATTAAATGCGAATGGGAGAATTGCGGAAAGATATTCGCGACGAAATCGTTGCGCAATGAGCATCTTCAACATCACGCGGTACAAGGACCCTCGCCGAATACCTGCGAGATATGTGGGAAATTGTGGCCTACTCGCGTCGATTATTGGAAACACGTGATGGGCGTGCACGCGGACACAGTGCCTCTGATTTGCGGCGTTTGTCTGAAAGTATTTTCCGACGTAATGCAATTGAGCGCACACGTGAAGGCGAAACATTGGCCGCTGACCAGCGGTGATTTCTGTTGTGATATCTGCGGTAGACCGTACTCCAACAAGTCCAAGATGTCCCGGCATCGAAAGATCCATGGCTTGGAGGTCATGGACGCTGTATGCGATAATAGCAGTTTCAATGAAACGACTAATGAATCGGTCAAGCCTGATCACAACAATGGCGCGTCGGAAATAGAATTGAGTTGCGATCAGTGCCCGGAACTCAGCTTCACCACCCTAGACAGCTTGTGTAATCATCGACGGATAGCACACAATCTTTTCCCGTGCGACTTGTGCAACAAATGTTACGGCAGAACGTCGCACTTGTGGAAGCATGTTAATAGGGTGCACAAGGGGCACGCGGATGTGACCTGTCCTTATTGCGCCAAGACAAGTGCATCAAGGGATCATCTAGCAGCGCATATTGCCAAGATTCATAGGTACCTGCCAGCAATGGGTAAGGATAATCAGAATTGTGTCGCTTCCAAGTCACTAAGTGTAGAGGATGATGTCTTGCATTATTGCGAGAAATGTAACAAGGGATTCCACAAACGTTATTTACTCCGTCGTCACATGAAAGGTTGTCAAAACTACCGTAAAGATCCTGGTGCATTGTTGACTCGTTGCCGGGCCTGCGAGAGGATATTCAAGGACCGTGCGAGCCTACAAAAGCACATTGAGAATCATCATAGCACGTATACTTGCCACTTGTGTAACGAAACGATCACTTCCAAGCTAGGTATCATGACACACAACCGCGTCAATCATATGGATCATCCGGACTTGACGTGCGACCATCCAAGTTGTAAAAAACTCTTCCGTACTAAAGAAGATTTGGAATCTCATCGAAAGGATCACAAGTATCATAGCAACCCGAACGTCTGTGACTTCTGCGGTGACACCGTGGAAAATAAGCTGAAGCTGAAGATGCACGTATTATCGTTGCATCGTAACGAGATCGGCGTCTCCTGCGGTGTCTGCCTCATTCCCATGAAGGACCCCAAAGACTTGAAGAAGCACGTCGAGTCGGAGCACAGCAGCGTTCTTTCCAATCCAAACACGTGCCAGGTGTGCGGCAAGCAATATGCATCCAAGTGGAAGGCCTTTGATCACACGAAGAAATGTCACGGCAAGGTCTTCCTCACGTGCAAACAGTGTCTAGCGGTTTTCACGGATGAAAACGATATACGCGATCATTACGAACACGTGCACAACGTTCCAAAGGATCAATTAGCCGTTTTCGAATATAGAATGGATATTGGTGCAAAGAGAGAAGGTTACGAGACTCCCGATATTATTGTGAAGGAGGAACCGGACGATATGGAATTCGACGAGGAGATATGTGACGAGAGTTCGAACGACTCTCGTAAACGTAGAAGATCGCCAAACGACACGTACGATTGCGAGATGTGTCCCGAGATCTTTCTCAATTCGGACACTCTCGCCAAGCATTATCAGAACGTCCATAACACCGATCCCGTCCGTATGTTCAAGAAATTCAAAAAGGATAGCGACAGCAAACGCAAGATGAGAAATAGGAACAACTTTGAGTGTAAGAATTGCAAGAAGCAGTTCTCTACCAAGACCTTATTCTGGAATCACATCAATTTATGTACACGGCGAAACTCGATAGGTAGATTTGACATGCCGAATAATGTCCCGACGTCAATTCTGGAGTCCCATCTGAAAAACAATAATCAGATTCCACGAGAAGAACCGCTACCGCTAACGAACGAATCCAACTTGAACATTCCCGATTTCAATCTATTCGAAGACATTAATATGCAATTGTCGGCCCAGAAACCTGTGCCGAATCTTATGCCGTTGTCGCAGATGAAGGCGACGGGTAACGGCAAATGCTCGAGAAAGGACTCGCGCAAGGTGTACGACGAGTCGACCAATACCGAGTGCACGTGCGAAGTCTGCGGTAAGCAATGGCCCGCCAAGAAACATTTGTGGCAACACCTGATTCGTTTCCATCGCGCTGAAGCTGCCGTTACGTGTGGCGTATGCCTGAAGCTATGTAAATCGTATCAAGATCTGGCCGACCACTTGAAGGCCGAGCATGCCCCCGTCTTGTCGCCAGAGGGCAACAATTTCACTTGTAAGACATGCGGTAGATACCACAACGCGAGAAGCAAACTGTTGTTGCACATGAGCATTCATATCGGGAACTTCCAGTGTCAAAAGTGCCAGCAAGGTTTCGCGAGCGAGGAGAAACTCAACGAGCACGCAATGAGCTGCAATGGTAAGGAGTTTGATGATCACGCGGTGGCAGACGAAGATAATGCAAAGAACGACAACGACGAGAAGGGTAGCTTGATCGCCGACGAAACGTCGGTTATCGAGGAAGTGGAAGAAGCAGAAGTGGATTTCGAGTCCGAAGGTGAAGAGAGTAGAGATATCCATGAAGACAATTCGGAAAACAGTGAAGGGGACAATTCGGAAAATAGCGATGATTCGGATAGCGACAGTAATAGCAGTTCGAGCGAGGACGAGAACGAGAATgaagaaggagaggaagaggaaaatgAAAACGAAAACGAAAACGAAAATGACAACGAAAATGAGTCTGATACAAGAACCACTAGTAGAGGGACCGGTGATAGTGTGTCGTGTAATTCCgagagcgacgacgacgaatcGGATATGAATGAGACGGAAGTGACGGAAAAGAAAGCGCTACATATGAGCGATATCGGTAGATTTAGAATACGCGGTGACGGTATTCAAGAGAATGTCAAGAACCAGAAAATCAATCTTATGTCCGTTACCGCAGCGACAACGGTTGCACAACAAGCTAAACAAAGTAATTTGAATGATCTTTTGATTGCCACTGCATCTGCGAACATGGACAAATTTGAAGCATTTTGTCTCGAGGGATCCGCTAAAGCTGCGGCGAGCGACGTAGACTTGtctgatgatgatgatgatgatgaagaaGACGATGGTGATaacgaagaagacgaagaggaaaataatgagaatgaagaaaaggaagaagatgGTGAGGAAGGTGGTGAAGATGAGGATGAGGCTGAAGGTGAAGATGAAGATGAAGGTGAAGGTGAAGGTGAAGGTGAAGCTGAAGCTGAAGCTGAAGCTGAAGCTGAGGCTGAGGCTGAGTCTGAGTCTGCGTCTGCGTCTGCGTCTGCGTCTGAGTCTGAGTCTGAGTCTGAAGCTGAGATTCAGGTTGAGGCTGAGGCTGAGGCTGAGGCTGAGGCTGAGGCTGAAAGTGAAAATGACAATGAAGATGAGGGTGAAGCCGCAGCCGAGGAAGAagcggaggaggaggaagaagaagaagaagaagaagaagaagaggaagaggaagaggatgaTGAAGACGACGATGATGGACCGCCTGTGTTAAGTCCAATAATGCCTTTGTTACCAGAAAACGAATCTGAAGAGCACAGCGGCACGACGGATCGCACGAGACACAAGCTCAGTCCGATGGTTTCCCTGAGTATGACTAAAGATCTGGTGGAATGCGAAATGACCGAAATGCCAAATGACATGGAGAACGCGTCGAACGCAGCCAACCTTTTCGCGGCTAACAACAATGATTTGCCCGTAACGTGGGATGAGAACTTGGATGACAACGAAATCGACAATGGCGATTGCAACTCCGACATGGAAGACAGGGATGTGGAGAAAAACGAAGAATTCAGTAAAGAGTACAAGATGGAAGTGAACGAGGGTGATGACTTTGAAGAGGATTCCGCGTATGAGAACATAGTGGATAATAGTAGAGAAGGTGATGGAGACAGTCAAGTGCACGAGATGCATAATCTGGACGGTACTGTGTTAATGGTGGCTAATGACGCGGAAGGTAATCACATTTTGATAGAACAGAACGTGTTAGATATCGATAATGAGGACTCTAATGCCGAAGCGGCGCAGTATATTTACCCAGAGACCGCTTACGAGATCGAGGAAGAGGATTACGCGACACGAAACGAGTGCGACATCATGCAAACGGATGAGGTGCAAGGTAGTATGTCCTATGTTCAAGATACATCAGAGAATGAGGATAGCACGGAGGGTGACGTCGAGGAGAACAGTAGTGACGTGCAGAAACAGTAG
Protein Sequence
MATEPRKSYDELCRLCASYDAVRMHIFGQEGKNRQLVDKIQTCLPFKIMEDDCLPKVLCYRCMYNLENFYDFRTACVNAAAWLERNRPKEGASNDGANDSAQSGEVHAELLKGKENMPVLIPEAPVVNPNAALGTPPRLNSDGEADPEIEEILDTSEGTDEATVIDDSEDRRSEYEMAYEMDMETNPSDFLEMTPMVTEENEEECGMNNTSAAATQDTAVFSHTSQQHEVYVCSLCNKAFSSKGHLSLHARIHVGEGDVIGERVITDDHTSYQRPYQCDLCHKSYSTAKHRWGHVSTTHRGHPAVTCAYCSRIYSTRYNLDEHIKSRHAGLPPPPELSVPLSRTETRYQCQTCLMVCTDLADFNAHRQICSQEQRTDLLGQTEAQNNKIFADTSDISSVESDDENKDFKNAEAKLAKNPQLTILKQALTKGDSLKRNFDDDGSTSSGKPKKIVKSEEGETNPQKRWYCESCPQSFTSVDSLKEHEIRHDAEKPFICILCKKDFVLKSSLIRHITTSHGVDPTPIVDSEKYLKATVMPQNWNDRVDNVYEQSEMKESPELSSSPEINLENDDKDYKNHENIEIETVFVCETCKRDFNDRASLWLHIRAMHKEYAAFTCGVCLKMCFDNTQLQNHVYMYHGRSKLLISEQRRYSCTICGRQHDSRKKLITHVSIHNVDPAYDPASFVQLNSNYYNENLNGNEGNEQVLDFDGEDGEKVDCYICYKSFPTEDHLIRHQRNAHKSDQIVSLDATGSGNTLSVNGNGNRAQYHLFFVCEVCGSSHSSKWERWLHINNTHNNESSIKCEWENCGKIFATKSLRNEHLQHHAVQGPSPNTCEICGKLWPTRVDYWKHVMGVHADTVPLICGVCLKVFSDVMQLSAHVKAKHWPLTSGDFCCDICGRPYSNKSKMSRHRKIHGLEVMDAVCDNSSFNETTNESVKPDHNNGASEIELSCDQCPELSFTTLDSLCNHRRIAHNLFPCDLCNKCYGRTSHLWKHVNRVHKGHADVTCPYCAKTSASRDHLAAHIAKIHRYLPAMGKDNQNCVASKSLSVEDDVLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNETITSKLGIMTHNRVNHMDHPDLTCDHPSCKKLFRTKEDLESHRKDHKYHSNPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVESEHSSVLSNPNTCQVCGKQYASKWKAFDHTKKCHGKVFLTCKQCLAVFTDENDIRDHYEHVHNVPKDQLAVFEYRMDIGAKREGYETPDIIVKEEPDDMEFDEEICDESSNDSRKRRRSPNDTYDCEMCPEIFLNSDTLAKHYQNVHNTDPVRMFKKFKKDSDSKRKMRNRNNFECKNCKKQFSTKTLFWNHINLCTRRNSIGRFDMPNNVPTSILESHLKNNNQIPREEPLPLTNESNLNIPDFNLFEDINMQLSAQKPVPNLMPLSQMKATGNGKCSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKSYQDLADHLKAEHAPVLSPEGNNFTCKTCGRYHNARSKLLLHMSIHIGNFQCQKCQQGFASEEKLNEHAMSCNGKEFDDHAVADEDNAKNDNDEKGSLIADETSVIEEVEEAEVDFESEGEESRDIHEDNSENSEGDNSENSDDSDSDSNSSSSEDENENEEGEEEENENENENENDNENESDTRTTSRGTGDSVSCNSESDDDESDMNETEVTEKKALHMSDIGRFRIRGDGIQENVKNQKINLMSVTAATTVAQQAKQSNLNDLLIATASANMDKFEAFCLEGSAKAAASDVDLSDDDDDDEEDDGDNEEDEEENNENEEKEEDGEEGGEDEDEAEGEDEDEGEGEGEGEAEAEAEAEAEAEAESESASASASASESESESEAEIQVEAEAEAEAEAEAESENDNEDEGEAAAEEEAEEEEEEEEEEEEEEEEEDDEDDDDGPPVLSPIMPLLPENESEEHSGTTDRTRHKLSPMVSLSMTKDLVECEMTEMPNDMENASNAANLFAANNNDLPVTWDENLDDNEIDNGDCNSDMEDRDVEKNEEFSKEYKMEVNEGDDFEEDSAYENIVDNSREGDGDSQVHEMHNLDGTVLMVANDAEGNHILIEQNVLDIDNEDSNAEAAQYIYPETAYEIEEEDYATRNECDIMQTDEVQGSMSYVQDTSENEDSTEGDVEENSSDVQKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01355612;
90% Identity
iTF_01422385; iTF_01423829; iTF_01421712;
80% Identity
-