Tpar003088.1
Basic Information
- Insect
- Tetramorium parvispinum
- Gene Symbol
- tfip11
- Assembly
- GCA_011638315.1
- Location
- VBVR01010733.1:633-4699[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-101 2.9e-97 326.1 18.0 1 275 387 655 387 655 0.98 2 2 0.0073 97 3.0 0.1 245 272 670 697 661 700 0.86
Sequence Information
- Coding Sequence
- ATGTCTGAGGATGAAGTGGAGAGTTTCGAAATCACCGACTATGATTTAgacaatgaatttaatatatcccGTCCCCGTCGAAAACTTTCAAAGAAAGAACAAATGTTAGgAATATGGGCTGACGATAGCGATGAGGAGTTATCTGCAAGACCATCTTTCAAGACCTTTAACAAGGGTCCTAAGAATTACACGGCGCCAGTTAATTTCGTTGCTGGTGGTATCCAACAAGCGGGAAAAccgaaagaaaaggaagacaAAGATGAcgaagaagatgaagaagagACACGGGAGACAAAGTATAGTAGTTCAAGttCAGAAGATGAGAGACCAAATAGTTCCAAATCACGTCCGTCCTTCTCCTTGAATTTGGATAGCGATATCGCGGGTCTGCGTAAAAAGCGCAATCAAGTAAATCCATTGTTGATGAAAAGCGGAATGGGTAGTTGGGAAGTACATACGAAGGGAATTGGCGCTAAATTATTGTTGCAGaTGGGATTTGAACCTGGTAAAGGTTTAGGTAAACAATTACAAGGAATAAGTGCTCCAGTGGAAGCACATCTCAGAAAAGGAAGAGGCGCGATTGGCGCATATGGTCCTGAAAAGACACCGAAAATTCccgagaaaaagaaggaagatgATGGGGAAGAAATAAGAGAATCCAAGTCTAAGGTATCTCAATGGCGGAAGGGTGATAACAGCAACAAGAAAAAAGTCAGATACTCTTATAGAAGTGTAGATCAAGTTTTGGAAGATGGAAAACTGAAGCCTAATAGAAAACTACCAGTGTCTAGCGATATGGCTAGAGTTAAAGTTATTGATATGACCGGGCCAGAACAAAGAATTCTTAGTGGATATCACGCAATAGCTGGCGGTCAGCAGTGTCCTGATGAAACTGGTATTACATCCGATAAGAAATCGAAAGTGAACTTTGCCCTGCCCGAATTAcagcataatttaaatttactcgTGGATATGTGCGAGCAAGATATTATTCAAAACGATCGACGAATGAGGCATTTAAACGATAGAGCGATTGCTTTAGaagcagaaaaaaagaatttatccaAAGTTGTGGATCAACACAGTCAGTTGATTGATACCTTGGAGAATGTACTTGTGATCGTGGATAGATTGATGAATGAGACGAAGGAGTTGTCGCTGCAAGAAACCGCGGAAGctttcaaaaatttgcaaGACAATTATTATGAGGAGTACAAGATGTACGAGCTTGGTGAATTAGCTAGCAGTTTTATAGcaccaaaaataaaagattgtcTGCTGAATTGGAATCCATTGATGCAACCAAAACagccaattaaattatttgaacagTGGAAGAGTATCTTGGAGAATGGAGCTAGTACAACTCTTCAGACACGGACTATGCATTCATATGATCAATTAGTATGGAATGCTTGGATGCCATCAATTAGAGGAGCCATACAACAGTGGACATGTAGGCAACCTGAGcctttaattgaattaattgaatactGGATGCCATTATTACCTAATTGGATTctggaaaatatattagatttattagtGTTACCAAAATTGACATTGGAGGTGGAAGAATGGAATCCACTTACCGATACGGTACCTATCCATACATGGATTCATCCTTGGTTGCCATTACtacGAAATCGTTTAGATACTTTGATTTATCCAATAATACGTAGAAAACTTGGATCTGCATTAGGAGGTTGGCATCCATCTGACCGATCTGCTAGATTAATGTTGCAACCTTGGGCAGAAGTGTTCGCCAAGGGAGACATGGAAGCGTTTTTAGTCAAGAACATTATtccaaaattacaaataaccTTATCCGAGTTTCTTATAAATCCACATCAACAGCACTTAGATCAATGGAACTGGGTATATGAATGGAAGGAATTAATCCCTGTTCATATCATGACAGGATTGcttgataaattctttttcccaAAATGGCTACAAGTCTTAGCACTTTGGCTTCATCATTCGCCTAATTATGATCAAGTTACGACGTGGTACATGGGTTGGAAAGGAATGTTGAGCGACAAGTTACTAGCTGAACCAGTAATAAAAGAACACTTCAAAAAAGCATTGGACATGATGAACAGGGCCGTCAGTGGACCACAAAATCATCAACCTGGCGCACTAGAACAGGTTTCATATTTAACAAGCTTGGAGAGAACTCAGCCGACAATGTCTCAAATAGCACCGATTGCGCAGCCGAGAATGGAGAGATTCGCAGAAGCAGTACGAATAGTGTCGCAAATACCGCAAGGTTTTAAGGATTTCGTACAAAAGAAATGTGAAGAGAGaggtatattatttatgccaATTCCGAACAGATATAAGGAGGCTAAGCAAGTATATAAAGTAGGCAATGTTCAAGCGTACATTGACAGTAATGTATTGTTCGTATGTCATAATGGTACAAATTGGATGCCAACACATTTAAATGCTTTGCTGGATATGTCtgaactttaa
- Protein Sequence
- MSEDEVESFEITDYDLDNEFNISRPRRKLSKKEQMLGIWADDSDEELSARPSFKTFNKGPKNYTAPVNFVAGGIQQAGKPKEKEDKDDEEDEEETRETKYSSSSSEDERPNSSKSRPSFSLNLDSDIAGLRKKRNQVNPLLMKSGMGSWEVHTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEAHLRKGRGAIGAYGPEKTPKIPEKKKEDDGEEIRESKSKVSQWRKGDNSNKKKVRYSYRSVDQVLEDGKLKPNRKLPVSSDMARVKVIDMTGPEQRILSGYHAIAGGQQCPDETGITSDKKSKVNFALPELQHNLNLLVDMCEQDIIQNDRRMRHLNDRAIALEAEKKNLSKVVDQHSQLIDTLENVLVIVDRLMNETKELSLQETAEAFKNLQDNYYEEYKMYELGELASSFIAPKIKDCLLNWNPLMQPKQPIKLFEQWKSILENGASTTLQTRTMHSYDQLVWNAWMPSIRGAIQQWTCRQPEPLIELIEYWMPLLPNWILENILDLLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWAEVFAKGDMEAFLVKNIIPKLQITLSEFLINPHQQHLDQWNWVYEWKELIPVHIMTGLLDKFFFPKWLQVLALWLHHSPNYDQVTTWYMGWKGMLSDKLLAEPVIKEHFKKALDMMNRAVSGPQNHQPGALEQVSYLTSLERTQPTMSQIAPIAQPRMERFAEAVRIVSQIPQGFKDFVQKKCEERGILFMPIPNRYKEAKQVYKVGNVQAYIDSNVLFVCHNGTNWMPTHLNALLDMSEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00898736;
- 90% Identity
- iTF_01421552;
- 80% Identity
- -