Tbic014929.1
Basic Information
- Insect
- Tetramorium bicarinatum
- Gene Symbol
- Ssb-c31a
- Assembly
- GCA_011636605.1
- Location
- VBVP01001168.1:36931-37846[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.26 6.8e+03 -2.8 0.2 29 37 39 47 36 47 0.77 2 2 4.3e-28 1.2e-23 82.9 0.3 1 52 56 108 56 108 0.96
Sequence Information
- Coding Sequence
- ATGCCGAAATCAAAAGAATATCTGTCTGATACGACGAGCAGCAGTGAGGAGGAAGTAAAATCAAAAAAGCAAAAGaagcaaaagagagaaaaagatgatGAAGCTAAAGCAGCGGAAGACGAGAAAAGACCGGCAAAGAAGGCGAAAACAGATGATGAAACCATTTGGGAGTTGGGTAACAATCGTCAAGTGAATGTGAGAAACTTCAAAGGCAAATTTTATGTTGATATTCGGGAGATGTATTATGACAAGGCTGGCGAATTAAAACCTGGGAAAAAAgGAATATGCTTAAGTCTGTCACAATGGAGGAAGTTCATGGATATTGTAGAAGAGGTGGATAAAGTCGCAAAATCGAAGAGTTAg
- Protein Sequence
- MPKSKEYLSDTTSSSEEEVKSKKQKKQKREKDDEAKAAEDEKRPAKKAKTDDETIWELGNNRQVNVRNFKGKFYVDIREMYYDKAGELKPGKKGICLSLSQWRKFMDIVEEVDKVAKSKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01422938; iTF_01423668; iTF_01422242;
- 90% Identity
- iTF_01422938;
- 80% Identity
- -