Timm006734.1
Basic Information
- Insect
- Tetramorium immigrans
- Gene Symbol
- Sub1
- Assembly
- GCA_011636585.1
- Location
- VBVO01001074.1:9416-9964[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.35 9.5e+03 -3.2 0.4 30 37 41 48 37 48 0.75 2 2 3.2e-28 8.8e-24 83.3 0.4 1 51 58 109 58 110 0.97
Sequence Information
- Coding Sequence
- ATGCCGaaatcaaaagaatttttgtctGATACTGACGATAGCAGCAGTGAGGagGAAGTAAAATCAAAAAAGCAAAAGaagcaaaagagagaaaaagatgatGAAGATAAAGCAGCAAAAGATGAGAAAAGACCGGCAAAGAAGGCAAAAACGGATGATGAGGAAACTATTTGGGAGTTGGGTAACAATCGTCAAGTAAATGTGAGAAACTTCAAAGGCAAATATTATGTTGATATTCGGGAGATGTATTTTGACAAGGATGGTGATTTAAAACCTGGGAAAAaagGAATATGCTTAACTCTGCAACAATGGCGGAAGTTCATGGATGTTGTGGAAGAGGTGGATAAAGTCGCAAAGTCGAAGAGTTAG
- Protein Sequence
- MPKSKEFLSDTDDSSSEEEVKSKKQKKQKREKDDEDKAAKDEKRPAKKAKTDDEETIWELGNNRQVNVRNFKGKYYVDIREMYFDKDGDLKPGKKGICLTLQQWRKFMDVVEEVDKVAKSKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01421566;
- 90% Identity
- -
- 80% Identity
- -