Tpar016073.1
Basic Information
- Insect
- Tetramorium parvispinum
- Gene Symbol
- Sub1
- Assembly
- GCA_011638315.1
- Location
- VBVR01003172.1:8722-9251[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.34 9.2e+03 -3.2 0.4 30 37 40 47 36 47 0.75 2 2 1.3e-28 3.5e-24 84.6 0.4 1 51 56 107 56 108 0.97
Sequence Information
- Coding Sequence
- ATGCCGAAATCAAAAGAATATGTGTCTGATACTGACAGCAGCAGTGAGGagGAAGTAAAATCAAAAAAGCAAAAGaagcaaaagagagaaaaagatgatGAAGATAAAGCAGCGAAAGACGAGAAGAGACCGGCGAAGAAGGCGAAAACGGATGATGAAACCATTTGGGAATTGGGTAACAATCGTCAAGTAAACGTGAGAAACTTCAAAGGCAAATATTATGTTGATATTCGGGAGATGTATTTTGACAAGGATGGCGAGTTAAAACCTGGGAAAAaagGAATATGCTTAACTCTGCAACAATGGCAGAAGTTCATGGATGTTGTGGAAGAGGTGGATAAAGTCGCAAAGTCGAAGAGTTAG
- Protein Sequence
- MPKSKEYVSDTDSSSEEEVKSKKQKKQKREKDDEDKAAKDEKRPAKKAKTDDETIWELGNNRQVNVRNFKGKYYVDIREMYFDKDGELKPGKKGICLTLQQWQKFMDVVEEVDKVAKSKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01421566;
- 90% Identity
- iTF_01421566;
- 80% Identity
- -