Tang000428.1
Basic Information
- Insect
- Tetragonisca angustula
- Gene Symbol
- ttk
- Assembly
- GCA_036937485.2
- Location
- JAWNGG010000003.1:1270637-1272896[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.9e-06 0.0039 17.3 0.0 3 38 201 236 199 242 0.78 2 4 5.1e-11 1e-07 31.9 0.0 5 39 253 286 250 293 0.85 3 4 0.11 2.2e+02 2.1 0.0 21 34 320 333 306 339 0.80 4 4 8.1e-12 1.7e-08 34.5 0.1 4 41 364 401 361 405 0.92
Sequence Information
- Coding Sequence
- ATGTCCGAAATTGCTAACCAACATGAGATCAATCAGAGTTATTGGTTCAAATGGAATGATTACCAGAATCATCTTTCCGATGTAGTTAGACAACTTTTAGAGGAAGATTGTATGGTGGACGTTACCCTGGCTGCAGCTGGGGAACGCATTCATGCTCATCGCATAGTTCTTTGTGCTTGTAGCACTTTGTTTCGAgaaatattGTGCCAAGTAAATGAAGATCattcaacaataatattaagCGATATATCTGCTCAAGATATAAAGtctattatagaatttatttaccatGGAGAAGTGAGAGTTCCAGTTGAAAATATTAGTAGTTTATTGGATGCTGCACGTTCGTTAAAGATTTGCGGCCTTAATGAAATTGATGGGCTTGAAGAAACTTACTCTGTTGTAAATAATAggaattttaatgataataacgaAGATTCAATGACTGTAATTGGCAAGGctgaagaaaatgttattgATGCATTGCAACATAATTATGAGGACTTAGAGAATCAACAAAAAGATGAGGTCATTAACAATTCtatgttgaataaaaaaaagaaacgtagacGTGATACAATAAAAAGAGATTACAGCGATGATATGCTAGCATCAGCAATCAATGACTTAAAAGCAGGTCAAACATTAATAGAAGCTTCTACTAAACATAATATACCACGTTCAACTTTGTATATGCGTGCTAAAGCATTAGGTATACATTTAAACGCATCAAGAAACGAATACCCTGCAGAATGTATGAAAGCTGCTATAAATGCTGTAATTGgtGGATCAAGTTTGCAACACGCGTCAGAAACGTTTAGTATACCAAAGACTGTATTATGGAGAAGGATTCAGAAAGAAGGATATCAAATATTACGTTCGGAAATGAAAAGGTCTTATGGATCAGATAAACGGGAAGCTGCAGTTAAAGCTTTAGAAAGAGGGGAGAATTTAACAAAAGTTGCACTtgaatttaaaattccGAAAACTACTTTATTTAGAGATAAAACACGATTGGTGGATGAAGGAAAATTGCCATTGTCATTTTGGAAGAAACGCAAGacagaaaatgaagaattaaaaaagtcTCGTTTAGAAGAAGCTGTTGCTGCTTGTAAAGGAGGAAAAATGTCGCAAGCAGCAGCGTCAATGACATATCATATTCCAAAAACGACAATATGGAGACGGCTCCAGCAAGATGTTAAAAAGTCAGAGCATTCATTAAACTCGAGGAAGCAAAGAATAGCAGATTCTAAACATAACATAGAACTGAAGGTAGAAGAAGGATCTGATTTTACATATTGCGAGgtTTCATCAGAAATTCCTATAACTTATATAGATGAAAATAGTATACCTGGAGATTCTGTGATAATATTAACAGCAGAAGATATGGATGAGCTGAATTTAGAGGAAgggcgacaaattattgttaacTCAgaaTCAGGGCAAGAGTATATTCCTTGTGCTATAAGtatcgaagaaaattcaaattattcacAAACAGAAAGTTAG
- Protein Sequence
- MSEIANQHEINQSYWFKWNDYQNHLSDVVRQLLEEDCMVDVTLAAAGERIHAHRIVLCACSTLFREILCQVNEDHSTIILSDISAQDIKSIIEFIYHGEVRVPVENISSLLDAARSLKICGLNEIDGLEETYSVVNNRNFNDNNEDSMTVIGKAEENVIDALQHNYEDLENQQKDEVINNSMLNKKKKRRRDTIKRDYSDDMLASAINDLKAGQTLIEASTKHNIPRSTLYMRAKALGIHLNASRNEYPAECMKAAINAVIGGSSLQHASETFSIPKTVLWRRIQKEGYQILRSEMKRSYGSDKREAAVKALERGENLTKVALEFKIPKTTLFRDKTRLVDEGKLPLSFWKKRKTENEELKKSRLEEAVAACKGGKMSQAAASMTYHIPKTTIWRRLQQDVKKSEHSLNSRKQRIADSKHNIELKVEEGSDFTYCEVSSEIPITYIDENSIPGDSVIILTAEDMDELNLEEGRQIIVNSESGQEYIPCAISIEENSNYSQTES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00118108;
- 90% Identity
- iTF_01417804; iTF_01418918; iTF_01419555; iTF_00982884; iTF_01420359; iTF_01418442; iTF_01419088; iTF_00873715; iTF_01418267; iTF_00873888; iTF_01420192;
- 80% Identity
- iTF_01417804;