Mbic017809.1
Basic Information
- Insect
- Melipona bicolor
- Gene Symbol
- ttk
- Assembly
- GCA_030673865.1
- Location
- JAHYIQ010000026.1:858474-860741[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.9e-06 0.0042 17.3 0.0 3 38 201 236 199 242 0.78 2 5 5.1e-11 1.1e-07 31.9 0.0 5 39 253 286 250 293 0.85 3 5 0.11 2.5e+02 2.0 0.0 21 34 320 333 306 338 0.80 4 5 1.1e-11 2.4e-08 34.1 0.1 4 39 364 399 361 405 0.92 5 5 3.3 7.4e+03 -2.7 0.0 31 43 406 418 404 419 0.81
Sequence Information
- Coding Sequence
- ATGTCCGAAATTGCTAACCAACATGAGATCAATCAGAGTTATTGGTTCAAATGGAATGATTATCAGAATCATCTTTCCGATGTAGTTAGACAACTTTTAGAGGAAGATTGTATGGTGGACGTTACCCTGGCTGCGGCTGGGGAACGCATTCATGCTCATCGCATAGTTCTTTGTGCTTGTAGCACTTTGTTTCGAgAAATATTGAGCCAAGTAAATGAAGATCattcaacaataatattaaGCGATATATCTGCTCAAGATATAAAGtctattatagaatttatttaccATGGAGAAGTGAGAGTTCCAGTTGAAAATATCAGTAGTTTATTAGATGCTGCACGCTCGTTAAAGATTTGCGGCCTTAACGAAATTGATGGGCTTGAAGAAACTTATTCTGTTGTAAACAATAggaattttaatgataataacgaAGATTCAATGACTGTAATTGGCAAGGCTGAAGAAAATGTTATTGATGTATTGCAACATAATTATGAGGATTTAGAGAATCAACAAAAAGATGAGGTCATTGACAATTCTatgttgaataaaaaaaagaaacgtagaCGTGATACAACAAAAAGAGATTACAGCGATGATATGCTGGCATCAGCAATCAATGACTTAAAAGCAGGTCAAACATTAATAGAAGCTTCTACTAAACATAATATACCACGTTCGACTTTGTATATGCGTGCTAAAGCATTAGGTATACATTTAAACGCATCAAGAAACGAATATCCTGCAGAATGTATGAAAGCTGCTATAAATGCTGTAATCGgtGGATCAAGCCTGCAACATGCGTCAGAAACGTTTAGTATACCAAAGACTGTATTATGGAGAAGGATTCAGAAAGAAGGATATCAAATATTACGTTCGGAAATGAAAAGGTCTTATGGATCAGATAAACGAGAAGCTGCAGTTAAGGCTttagaaagaggagagaattTAACAAAAGTTGCACTTGAATTTAAAattccGAAAACTACTTTATTTAGAGATAAAGCACGATTGGTAGATGAAGGAAAATTGCCATTGTCATTTTGGAAGAAACGTAAGACAGAAAATGAAGAGTTAAAAAAGTCTCGTTTAGAAGAAGCTGTTGCTGCTTGTAAAGGAGGGAAAATGTCGCAAGCAGCAGCGTCAATGACATATCATATTCCAAAAACAACAATATGGAGACGTCTTCAACAAGATGGTAAAAAGTCAGAGCGTTCGTTAAACTCGAGGAAGCAAAGAATAACAGATTCTAAACATAACATAGAAATGAAGGTAGAAGAAGGCTCTGATTTTACATATTGCGAGgtTTCATCAGAAATTCCTATAACTTATATAGATGAAAATAGTATACCTGGAGATTCTGTGATAATATTAACAGCAGAAGATATGGATGGACTGAATCTAGAGGAAGGGcgacaaattattgttaacTCAGAATCAGGGCAAGAGTATATTCCTTGTGCTATAAGtatcgaagaaaattcaaattattcacAAACAGAAAGTTAG
- Protein Sequence
- MSEIANQHEINQSYWFKWNDYQNHLSDVVRQLLEEDCMVDVTLAAAGERIHAHRIVLCACSTLFREILSQVNEDHSTIILSDISAQDIKSIIEFIYHGEVRVPVENISSLLDAARSLKICGLNEIDGLEETYSVVNNRNFNDNNEDSMTVIGKAEENVIDVLQHNYEDLENQQKDEVIDNSMLNKKKKRRRDTTKRDYSDDMLASAINDLKAGQTLIEASTKHNIPRSTLYMRAKALGIHLNASRNEYPAECMKAAINAVIGGSSLQHASETFSIPKTVLWRRIQKEGYQILRSEMKRSYGSDKREAAVKALERGENLTKVALEFKIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEELKKSRLEEAVAACKGGKMSQAAASMTYHIPKTTIWRRLQQDGKKSERSLNSRKQRITDSKHNIEMKVEEGSDFTYCEVSSEIPITYIDENSIPGDSVIILTAEDMDGLNLEEGRQIIVNSESGQEYIPCAISIEENSNYSQTES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00118108;
- 90% Identity
- iTF_01417619;
- 80% Identity
- iTF_00983061;