Basic Information

Insect: Tetheella fluctuosa
Gene Symbol: -
Assembly: GCA_951216915.1
Location: OX578244.1:4100198-4102150[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 5.6e-06 0.00043 21.3 2.3 2 23 11 33 10 33 0.96

2 15 1.5e-06 0.00012 23.0 1.6 1 23 39 62 39 62 0.98

3 15 0.082 6.4 8.1 0.4 1 23 70 93 70 93 0.96

4 15 0.0048 0.37 12.0 0.2 2 23 111 133 110 133 0.95

5 15 3.8e-05 0.0029 18.6 0.4 1 23 159 182 159 182 0.96

6 15 0.55 43 5.5 0.7 2 20 190 208 189 210 0.81

7 15 0.016 1.2 10.4 2.2 2 23 219 241 219 241 0.95

8 15 0.00086 0.067 14.4 5.7 1 23 265 288 265 288 0.97

9 15 8e-06 0.00062 20.8 0.5 2 23 295 317 294 317 0.96

10 15 9.7e-05 0.0075 17.4 2.2 2 23 324 346 323 346 0.94

11 15 0.0065 0.51 11.6 2.2 1 23 352 375 352 375 0.97

12 15 0.077 6 8.2 5.0 2 23 383 405 383 405 0.95

13 15 9.9e-05 0.0077 17.3 0.1 1 23 412 435 412 435 0.98

14 15 0.0063 0.48 11.7 2.2 1 22 442 463 442 465 0.90

15 15 0.015 1.2 10.5 2.7 3 23 480 501 479 501 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	5.6e-06	0.00043	21.3	2.3	2	23	11	33	10	33	0.96
2	15	1.5e-06	0.00012	23.0	1.6	1	23	39	62	39	62	0.98
3	15	0.082	6.4	8.1	0.4	1	23	70	93	70	93	0.96
4	15	0.0048	0.37	12.0	0.2	2	23	111	133	110	133	0.95
5	15	3.8e-05	0.0029	18.6	0.4	1	23	159	182	159	182	0.96
6	15	0.55	43	5.5	0.7	2	20	190	208	189	210	0.81
7	15	0.016	1.2	10.4	2.2	2	23	219	241	219	241	0.95
8	15	0.00086	0.067	14.4	5.7	1	23	265	288	265	288	0.97
9	15	8e-06	0.00062	20.8	0.5	2	23	295	317	294	317	0.96
10	15	9.7e-05	0.0075	17.4	2.2	2	23	324	346	323	346	0.94
11	15	0.0065	0.51	11.6	2.2	1	23	352	375	352	375	0.97
12	15	0.077	6	8.2	5.0	2	23	383	405	383	405	0.95
13	15	9.9e-05	0.0077	17.3	0.1	1	23	412	435	412	435	0.98
14	15	0.0063	0.48	11.7	2.2	1	22	442	463	442	465	0.90
15	15	0.015	1.2	10.5	2.7	3	23	480	501	479	501	0.91

Sequence Information

Coding Sequence: ATGCATACGTCTTCTGTGAGGGGAATCATAAGATGCCACTtatgtgagaaagtatatacgAATAATCGTAACTTAAAAAGACATATTGAGATGTTTCATGGCGAAAAAGGTGAATTTAGGTGTGACATATGCCCTAAAGTGTATACTTCAAATCAGAGTTTAAGACGACATTCTAGGACACGACATAACACGGAGAATCAAGACCAATATACATGTGATTTTTGCTCAAAAATCATTTTTGGTAGAGATAACTTGGATAGCCATATACAATTATATCATAGACAAGACAGTCCAAATGACGATGATTCAGAAATGAAAGACAATGATATTACTTGTGAATCTTGTGGGAGCACCTTCGAAGAGGAAACTCAATTGCGTCAGCATATTAAATTAGAACATTcgtttaaaacattttataagtacTGTAGGAAATCGTTGTTAAAGCAGTATGGTGGGGATGGTCAAAGACAATTTTACAACTGCGAGTTTTGTAATATTGCTTTTACAACAGTTTATGAGTTGAAAGATCATATGAGAGGTAATCATGACATTGAATATAATCTCTCCACATGTAATGTATGCTTCAAAAAATTCTACAGTAAAGAAATCATGACGGAACATAAGAAAATTTGTATTCCACCGGCAAACGTTAACTCTTGCAGTCATTGCGACAAACTATTTACGGATATATCCAGTTTGGAGTTTCACACTAGAATCTTTCATCCGCAAGCACAAATTGCAGATTCAAATATAACATCGACAAATTTTGACGAATCTCTTGATACTAGATCTTATAAATGTGTTCATTGCGATCGAATTTACTATAGCGAGAGATCACTAAAACATCATATGAAATTAAAGCATAGTACAGATGAAGCCGTGGAGTGTGAATATTGTGGAAAGATTTGTAGCAACAAATATTACTTGGCATCCCATATTAAAATCGTCCACAGTAATGATACGTGGTCCAAATGTGATTATTGCGAAAAACAGTTCAAGTCCAAGAGAAATATACGAAGACATATTGAGTATACTCATTTGGGAATGCAAAGGTACAAGTGTATTGAATGTGAAACTCTTTTTAAAGAGAAGAGGAGCTTGCGTAAGCATGTTAGAACAAAGCATCCCAATTCAGCAACGTTTCCACAATGTCATATATGCCAGAAACGGTTTGAATCAGCGAAATCTTGTAAAATTCATCTAAAATTACTACATTCTTTTAATATGAATACTTATCCGTGCGATCTTTGTTCCGTTTCCTTCAGCTCcaatgaagctttagtaatacATTTGCAAACAAAACATTTAGCTGAAGAtgaaatttataaatgtgaagagTGTAACCTAGTTTTCAAAGGACAGGAGAAGTTTGAGCAGCACAATGAATTATGCCACGTAAATTTACTGCCAAATATAAAGCAAAAAGTTTTACCTAGATGTATTATTTGCATGAAAGATTTTAGCACCAGAAAAACACTGAAGAGACATATTAAGAAGTTCCATTGCGAATTTGATGTGGATGACTTGGCTACTTTTGGGTCTAGACGTCGAGTTTTTAACGTCGACTGTGAAGACTGCATTAAAAACTTCAACGGTGATttccattataatatttatcagaaACTTAAACATTTGCGAGATTCGGTCATTTTCAAATGCGAAACATGTAGTTGTTCATACGACGTTCTAGAATATTCTATACAGAGGTATAAGCTTATTAATTTGGATGGTTTCAAAAGTAAAATGATACTAAGCGAACTGTGTACGACAGAAATGAGCGATGAGGAAGGTTAcgtgccttctgaatttgggtCGTTGCATGAAATAATGGAACCAGAAAGCACGACAAGTGATATAAAATTGGAGCTTCCAGATGAAGCTGTTTATACGCATTCAATTATACATGGACTGCATAATGAGGTAGATATTAAAAATGAACCCATGTCtccttaa
Protein Sequence: MHTSSVRGIIRCHLCEKVYTNNRNLKRHIEMFHGEKGEFRCDICPKVYTSNQSLRRHSRTRHNTENQDQYTCDFCSKIIFGRDNLDSHIQLYHRQDSPNDDDSEMKDNDITCESCGSTFEEETQLRQHIKLEHSFKTFYKYCRKSLLKQYGGDGQRQFYNCEFCNIAFTTVYELKDHMRGNHDIEYNLSTCNVCFKKFYSKEIMTEHKKICIPPANVNSCSHCDKLFTDISSLEFHTRIFHPQAQIADSNITSTNFDESLDTRSYKCVHCDRIYYSERSLKHHMKLKHSTDEAVECEYCGKICSNKYYLASHIKIVHSNDTWSKCDYCEKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSATFPQCHICQKRFESAKSCKIHLKLLHSFNMNTYPCDLCSVSFSSNEALVIHLQTKHLAEDEIYKCEECNLVFKGQEKFEQHNELCHVNLLPNIKQKVLPRCIICMKDFSTRKTLKRHIKKFHCEFDVDDLATFGSRRRVFNVDCEDCIKNFNGDFHYNIYQKLKHLRDSVIFKCETCSCSYDVLEYSIQRYKLINLDGFKSKMILSELCTTEMSDEEGYVPSEFGSLHEIMEPESTTSDIKLELPDEAVYTHSIIHGLHNEVDIKNEPMSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01437287; iTF_01252033; iTF_00007326; iTF_01083556; iTF_00761875; iTF_00761892; iTF_01416087; iTF_01416079;
90% Identity: iTF_01083556;
80% Identity: -