Hpyr016619.1
Basic Information
- Insect
- Habrosyne pyritoides
- Gene Symbol
- -
- Assembly
- GCA_907165245.1
- Location
- OU015615.1:5076374-5078737[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2.9e-06 0.00022 21.9 3.2 1 23 8 31 8 31 0.95 2 19 0.002 0.15 13.0 1.2 2 23 37 59 36 59 0.94 3 19 1.8e-05 0.0014 19.4 0.3 2 23 68 90 68 90 0.97 4 19 8.1e-06 0.0006 20.5 1.5 2 23 99 121 98 121 0.94 5 19 1.9e-05 0.0014 19.4 1.5 2 23 129 151 129 151 0.97 6 19 1.8e-05 0.0013 19.4 2.2 2 23 160 182 159 182 0.95 7 19 1.1e-06 8.4e-05 23.2 1.5 1 23 188 211 188 211 0.98 8 19 1.1 82 4.4 0.3 1 23 219 242 219 242 0.91 9 19 0.0015 0.11 13.4 0.3 2 23 261 283 260 283 0.94 10 19 1e-05 0.00076 20.2 0.9 1 23 309 332 309 332 0.97 11 19 0.0038 0.28 12.1 1.5 2 23 369 391 369 391 0.96 12 19 0.015 1.1 10.2 6.9 1 23 415 438 415 438 0.96 13 19 9.5e-06 0.00071 20.3 0.6 2 23 445 467 444 467 0.96 14 19 0.00013 0.0096 16.8 2.2 2 23 474 496 474 496 0.95 15 19 0.007 0.52 11.3 2.2 1 23 502 525 502 525 0.97 16 19 0.18 13 6.9 7.1 2 23 533 555 533 555 0.95 17 19 0.00023 0.017 16.0 0.3 1 23 562 585 562 585 0.97 18 19 0.0054 0.4 11.6 1.8 1 23 592 615 592 615 0.94 19 19 0.021 1.6 9.8 2.2 5 23 632 651 629 651 0.89
Sequence Information
- Coding Sequence
- ATGTATACAAACCTGTTAGATTTCATATGCGACTACTGCAATAGGGCCTTCACTAGGAAATACAACCTGCAGACTCACATAGAGAATTGTCATATCAACTCATCGTGCTGCTGTGAAATTTGTGAACAGAAATTTGCCAGTCCAGCAGGCCTGCAATTGCATCTCTCTAGAGGCCATAACAGATATGGTCAACCGTTCCCAGAATGTGATCTCTGCGGGAGAATTTTCACAAGAAAACAAAATGTTATGTCTCATATGATCACGGTACATCTACAAGGATTGGGTCCGGAGATTCGTTGTAGATTATGTGATAAAACATTTACTACCGAAAGGAATTTGAAGAGGCATGTAAATCAGCTGCATAATCCCAATGTTGAATATCCTACGTGTAATGAATGTAATAGAGTGTTCAAAGGTAAACATTCATTGATTGTTCATATACAAACTATGCATTCGTCTTCAGTTAGAGGCATTATCAGATGCCATTTATGTGAGAAGGTATACACGAACAATCGTAACTTAAAAAGACATGTGGAGATGTTTCATGGTGAAAAAGGTGAGTACAGATGCGATATCTGCCCCAAAGTGTACACGTCCAATCAGAGTTTAAGAAGACATTCCAGAACTCGACATAATACAGATAATCAAGAACAATACAAATGTGATTTCTGCACGAAAATCATTTTGGGTAGAGACAATTTGGATAGTCACATACAATTGTATCATAGACAAGATAGCCCAAACGATTTCAGCAATTTGGAAATAAAAGACAGTGATATTACTTGTGAATCATGCGGGAGGAACTTCGAAGTGGAAACTCAATTGCGACAGCATATTAAATTTGAACATTCATTCAAAACGTTTTACAAGTACTGTAGGAACTCCTTGTTAAAGCAATATGGCGGTGATCATAGACAAAGGTTTTATAATTGCGAGTTTTGTAACACTGCCTTCACAAATGTTTACGAACTTAAAGATCATATGAGAATGAATCATGATATTGAATATAACCTATCGACTTGCAATGTCTGCTTCAACAAGTTTTACAGTAAAGAAATAATGAATGAACACAAGAAAATATGTATTCCACCGGCAGATGTTAATTCTTGTAGCCACTGCGACAAGTTGTTCACAGACATCTCCAGCTTAGAGTTCCATATTAGAATATTCCATCCACAATCTCAAATTGCCGATTCGAATATAACATCGACAAATTTGGACGAACCTATCGACACTGGTTCCTATAAATGCGTCCACTGCGATCGAATATACTACAGCTATAGATCGCTAAAACATCATACGAAGTTAAAGCATACCACCGATGAAGCAATGGAATGCGAATATTGTGGAAAGATCTGCAGTAACAAGTATTATTTGGCATCTCATATAAAAATAGTACACAATAACGATACATGGGCGAAATGCGATTATTGTGAGAAACAGTTTAAGTCCAAAAGGAATATTCGCAGGCATATTGAGTACACTCATCTAGGAATGCAAAGATACAAGTGTATTGAGTGTGAAACTCTGTTTAAGGAAAAGAGAAGCTTGCGCAAGCACGTCAGAACTAAACACCCCAATTCCGCCACGTTCCCCCAGTGTCATATATGTCATAAACGATTCGAATCGGCAAAATCATGCAAGATTCACCTGAAGTTACTTCACTCGTTCAATATGAACACACATCCGTGCGATCTGTGTTCTGTTTCGTTCAGTTCTAATGAAGCTTTGTTGATACACCTGCAGACAAATCATTTGGCCGAAGATGAGATTTATAAATGCGAGGAGTGCAATCTTGTTTTTAATGGACAGGAGAAATTTGAGCAGCATAATGAAATGTGTCACGTTAATTTGGTCCCCAATATCAAACAGAAGGTATTGCCGCGATGCATTATATGCATAAAGGATTTTAGCACGAGAAAGACTTTGAAGAGGCATATTAAGAAATTCCACTGTGAATTTGATGTTGATGACTTAGCTACTTTTGGATCTAGGCATCGTATTTTCAATGTAGATTGTGAAGACTGCATCAAGAATTTTAACGATGATTTTTACTACAATATCTATCAGAAACTTAAACATTTGCGCGACTCAGTCATTTTTAAATGCGAGACGTGTACCTCTTCTTATAATGCTCTGGAGTACGCTATACAGAGATATAAGGTTTCCAGTTACGATGGACTGAAAAGTAAATTGATATTAAGTGAATTGTGCACGACTGAAATGAGTGATGAAGAAGGTTACATGCCTTCGGAATTTGGGTCACTACATGAGCTCATTGAACCAGAGAGCACAACTGGTGATATTAAAATGGAGCCTCTTTATGAAGAAGATGATATTAAGAATGAACCAATGTATCCATAG
- Protein Sequence
- MYTNLLDFICDYCNRAFTRKYNLQTHIENCHINSSCCCEICEQKFASPAGLQLHLSRGHNRYGQPFPECDLCGRIFTRKQNVMSHMITVHLQGLGPEIRCRLCDKTFTTERNLKRHVNQLHNPNVEYPTCNECNRVFKGKHSLIVHIQTMHSSSVRGIIRCHLCEKVYTNNRNLKRHVEMFHGEKGEYRCDICPKVYTSNQSLRRHSRTRHNTDNQEQYKCDFCTKIILGRDNLDSHIQLYHRQDSPNDFSNLEIKDSDITCESCGRNFEVETQLRQHIKFEHSFKTFYKYCRNSLLKQYGGDHRQRFYNCEFCNTAFTNVYELKDHMRMNHDIEYNLSTCNVCFNKFYSKEIMNEHKKICIPPADVNSCSHCDKLFTDISSLEFHIRIFHPQSQIADSNITSTNLDEPIDTGSYKCVHCDRIYYSYRSLKHHTKLKHTTDEAMECEYCGKICSNKYYLASHIKIVHNNDTWAKCDYCEKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSATFPQCHICHKRFESAKSCKIHLKLLHSFNMNTHPCDLCSVSFSSNEALLIHLQTNHLAEDEIYKCEECNLVFNGQEKFEQHNEMCHVNLVPNIKQKVLPRCIICIKDFSTRKTLKRHIKKFHCEFDVDDLATFGSRHRIFNVDCEDCIKNFNDDFYYNIYQKLKHLRDSVIFKCETCTSSYNALEYAIQRYKVSSYDGLKSKLILSELCTTEMSDEEGYMPSEFGSLHELIEPESTTGDIKMEPLYEEDDIKNEPMYP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01417073;
- 90% Identity
- iTF_00761875;
- 80% Identity
- iTF_00761875;