Tmes017984.1
Basic Information
- Insect
- Tenthredo mesomela
- Gene Symbol
- MBD-R2
- Assembly
- GCA_943736035.1
- Location
- CALSEY010000217.1:144171-155450[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-17 5.6e-13 49.7 0.2 6 69 280 343 275 351 0.91 2 2 2.3 2.7e+04 -3.8 0.0 41 64 920 942 917 945 0.76
Sequence Information
- Coding Sequence
- ATGGTAAGCCGCGGAGGCCTCAAGTTTTTCCCTGGTGCAAAGTTGGAAGCTAAGGATTTCAATGAAAAATGGTATACAGCACGTGTAGTTGAGACCGACTGGGTCGAAAGAGAAGTGTTGATACACTTTGACAAATGGAGTTCAAGATTCGATGAATGGATACCAATGGACAGCTCAAGGCTACGAGTACTTCAAGTACAGCCAAACGAGTCAACTTGGACGCTACCACCTCCGGAGACGAAAATGCGTGAATTTGTGGCTGGTGAAAGAATTCTAGCTACTTGGGCTGACGGTAGGAAATATCCTGCCAAAGTAAAGACTGTGTTGGGAAATGACAGATACGACGTTCTGTTCGACGATGGTTATGCGAAAATAGTCAGATCGTCAAAGATGACCAAAATTGCTGCCACTACCGAAAAGAAACCAATAGATGGGGATTACATAGGTAGTAAACAAGAGAGAAGAGATAAGAAAAGAAAGCATAGTGTTATGGATCTGTTTCAATCTAACGCCAAGAAACGGCCTAGAACAGATTCAGAAAAATCGTTAAAAAAAGAAGAGTCGTTGATAAGCGAAGACGATAATCAAGTCGAAAAACCCGAATTGATGACACCAGCGATAGCTTACGAATCTGGCACAGAGGTACTCAAAGGGTTCGAACCGAGTAAACCAAAGGTTAAAACTTATGCTAAGAAAAAGAAGAAGGAAATATCTATATCTAATAAGATTGATACAGATAACGAAGACGAGATAGTGCCAGAATGGATTGACGGCGAACCACAAGGAATAGAGTCTTATATTGTCGATGGTAATGACGGACCACGTCGGTCTATCATTGTTGCGGATAAGAGATTACCGCCTGGGTGGCAGAAGCACTTTACTCAGAGAAGAACTGGCACCTCTGCCGGAAAGTGGGATGTTTTGTTTATACACAAATCAAGTGGTAAAAAGTTTAGATCGCGTAACGATATTCGAGCGTTTATGGAACTTCAAGGGCAGTTTGATTTCGAACCAGAGAAATTTGACTTCTGTATACATCGTAAGAAGAACAGCAAATCTAACGCTGCTAAATTGAAGCAGGAACAACCACCGATAGAAGTTCCAAAAAAAATCAAAACTCTTTTGCCCAAAACAAAAACACCCGTCAGCACTCCTGACCCTATACCTCTATGCGTTGTACCACCGCCTGTTCAACCACCACCAATTACTCCGGTTACACCTGCAGATCCTGGTGCTGTTTTCATCGGAGGACTCCGTGTTGAGATGGAAGACAGTGCTTATAAATGTCCAAAAGAAGGTTGCAACAAAAATTTTCGTAAAGAAAATCTTCTTCAAATGCATATCAAGCATTATCACCCAGAGTATTCAAAATTTTTGGGATCAACACCGAACGTAGCAGACTTAGCTTACGCTAGAACGATTGGGGAGTCAATCGAAGACATAATACCGAAGAAACAGAACAATTTTTTAGAAAAAATCAACAAATTTGAGAAGAAGAAGGCATCCCAAGAGAAACATGTGTCTGTTAATGAATCAGAAACGAATAGAACCGAAAAAATATCCACCGCAATAAAAGAGGATTCAAAATTTGAAATAACTTCACCTATTTCAAACCAAGGCATCGAATTGGACGACGATATTATTAAAAAGAGGGAAGCTAGCTGCGCAATGTCGCCTGGTACTTTGTTCGACCTGAAAATCAGGGAAGAAAAAACTCAAACAGGAATTAAAACTTTATTACCGGTGGTTAGACCAGCACTTCCCAATCCACTCACAATCAACGTAGCTGCTGAATTAAGCAAATTGGATAGGTCAAAATCGTTGGACGAACCATCGGTATCGGAAAAGGGAAAGTCCATAAGGAAACGACAAATGTCGGAATATAATTCTGATCAAGTACAAATAAAGTACAAGAAAAAACAAGAGCTTAAGGAAGATTACGGGGATTTAGATGATGGTACTTTGGACATTGAGGAGCCGGTTGCCCCTACGTACCGATTCAGTCGTAGAAAATCCGATCCAAAGAGCGATGAGAATAGTCAAACCAGTCAACTAAACGATTCTCATCTTGATAAAGGTGATACCCCTAAAGGGGATGCTGCCAAAAGAGATAATAGTAATGATAATACTGAAGATGGAGACGGGGTAATGATGATGATTAATGGGGAAATGATCAAGGTGGAGCAACTTCGTAGAGAAGAAATAATAAATTGTACTTGCGGATTCATGGAAGAAGATGGATTAATGATACAATGTGATCTTTGCCTTTGCTGGCAGCACGGACACTGCAATGCTATTGAAAGGGAAAAAGATGTGCCAGAAAAATATGTATGCTACATTTGTCTCAATCCTTATAGACAAAGATCGTCTAAGAAATATATTCACGATCAGGATTGGATTAAAGAAGGAAAATTGCCGAGTCTGTCTAATCGTACCAAGAATCAATCTGCGATCGATCAAAGGACTGCGATGTTGAAACGGTCGTACGACTTAGTTGCCGCATTGCTACAAATACAACAAATTCTTCATAGTCTAAGAGTGAAAATCAATGTCGCGGAAAAAAAGGATCATCCGAAATTATATCTTTGGGCAAAAAATTGGGAGAAATCCGAGATACCAACGCCGGATACCGATCCAGTGCCAATAATGGAAATTGTTAAACCACCTTTAGAAACAGCAGAGTCTAGTTTGGACAGTTCACCCACTACTGAAATAAAAGTTGAAATAAAGGAAGAACCGAAGGAGGAACCTGACGAGAAATCAATCGCATCGAATTCAGAACTGATGAAAATTTTAGAAGAAGATAGTCTGCATGCCGAAGAACTTAAGAATATTAAAAAACAGGAGAGCCAAAACGAAGGACATATTCTTTTGGAAGCATTGACCAGAAATAGTACAGACAAAATAGCTTCGGAATTGAAAACTGATAACAGCGAGCCACCAAATAATCAGCCATCTACGTCCAAGACGCCAGATCTGATCTCTTCAAATCCAACTGAGAATGAACACCAAGAGGCTCGTTTGAGTGAAATTTTACCACTACAACCTTTCATACCGGAACCAGAGGCTCCGATAGACCCTGCTGAGTGTCGTTCGAGACTTTTGGACCACATTGATCATTTTCAAAATCATATAGATTCGCGGCTTATTACCATCGAGGCACAAGTGTCTGCACTAGAGGCCATGGATCCAGATGATACTGTATCTAATCCTGATATTTTGCCTCGAACAAAGCAGACCGTACAAATGCTACTAAGGGATTTAGCGACTGTTAGAAAACTCGCCGCTCTTTGCTGA
- Protein Sequence
- MVSRGGLKFFPGAKLEAKDFNEKWYTARVVETDWVEREVLIHFDKWSSRFDEWIPMDSSRLRVLQVQPNESTWTLPPPETKMREFVAGERILATWADGRKYPAKVKTVLGNDRYDVLFDDGYAKIVRSSKMTKIAATTEKKPIDGDYIGSKQERRDKKRKHSVMDLFQSNAKKRPRTDSEKSLKKEESLISEDDNQVEKPELMTPAIAYESGTEVLKGFEPSKPKVKTYAKKKKKEISISNKIDTDNEDEIVPEWIDGEPQGIESYIVDGNDGPRRSIIVADKRLPPGWQKHFTQRRTGTSAGKWDVLFIHKSSGKKFRSRNDIRAFMELQGQFDFEPEKFDFCIHRKKNSKSNAAKLKQEQPPIEVPKKIKTLLPKTKTPVSTPDPIPLCVVPPPVQPPPITPVTPADPGAVFIGGLRVEMEDSAYKCPKEGCNKNFRKENLLQMHIKHYHPEYSKFLGSTPNVADLAYARTIGESIEDIIPKKQNNFLEKINKFEKKKASQEKHVSVNESETNRTEKISTAIKEDSKFEITSPISNQGIELDDDIIKKREASCAMSPGTLFDLKIREEKTQTGIKTLLPVVRPALPNPLTINVAAELSKLDRSKSLDEPSVSEKGKSIRKRQMSEYNSDQVQIKYKKKQELKEDYGDLDDGTLDIEEPVAPTYRFSRRKSDPKSDENSQTSQLNDSHLDKGDTPKGDAAKRDNSNDNTEDGDGVMMMINGEMIKVEQLRREEIINCTCGFMEEDGLMIQCDLCLCWQHGHCNAIEREKDVPEKYVCYICLNPYRQRSSKKYIHDQDWIKEGKLPSLSNRTKNQSAIDQRTAMLKRSYDLVAALLQIQQILHSLRVKINVAEKKDHPKLYLWAKNWEKSEIPTPDTDPVPIMEIVKPPLETAESSLDSSPTTEIKVEIKEEPKEEPDEKSIASNSELMKILEEDSLHAEELKNIKKQESQNEGHILLEALTRNSTDKIASELKTDNSEPPNNQPSTSKTPDLISSNPTENEHQEARLSEILPLQPFIPEPEAPIDPAECRSRLLDHIDHFQNHIDSRLITIEAQVSALEAMDPDDTVSNPDILPRTKQTVQMLLRDLATVRKLAALC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01200150;
- 90% Identity
- iTF_00938692;
- 80% Identity
- -