Basic Information

Insect: Tenthredo amoena
Gene Symbol: RREB1
Assembly: GCA_963966615.1
Location: OZ016485.1:2642406-2648948[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.089 9.4 7.5 0.0 2 23 50 71 49 71 0.95

2 14 3.2e-05 0.0034 18.3 0.5 2 23 87 108 86 108 0.96

3 14 4.1e-06 0.00043 21.1 1.5 1 23 114 137 114 137 0.98

4 14 0.16 17 6.6 4.5 2 23 252 274 252 275 0.96

5 14 0.069 7.3 7.8 0.1 1 23 464 486 464 486 0.96

6 14 3.5e-05 0.0037 18.2 0.3 1 23 495 517 495 517 0.98

7 14 0.00079 0.084 13.9 3.1 1 23 523 546 523 546 0.97

8 14 0.0024 0.26 12.4 2.0 1 23 933 956 933 956 0.95

9 14 0.00032 0.033 15.2 1.4 2 23 1239 1260 1238 1260 0.97

10 14 0.024 2.5 9.2 4.5 1 23 1266 1289 1266 1289 0.97

11 14 0.0044 0.47 11.6 1.5 1 23 1329 1353 1329 1353 0.96

12 14 0.96 1e+02 4.2 4.5 1 23 1442 1465 1442 1465 0.94

13 14 0.012 1.2 10.3 0.4 2 23 1518 1539 1517 1539 0.94

14 14 0.0087 0.92 10.6 7.9 1 23 1545 1567 1545 1567 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.089	9.4	7.5	0.0	2	23	50	71	49	71	0.95
2	14	3.2e-05	0.0034	18.3	0.5	2	23	87	108	86	108	0.96
3	14	4.1e-06	0.00043	21.1	1.5	1	23	114	137	114	137	0.98
4	14	0.16	17	6.6	4.5	2	23	252	274	252	275	0.96
5	14	0.069	7.3	7.8	0.1	1	23	464	486	464	486	0.96
6	14	3.5e-05	0.0037	18.2	0.3	1	23	495	517	495	517	0.98
7	14	0.00079	0.084	13.9	3.1	1	23	523	546	523	546	0.97
8	14	0.0024	0.26	12.4	2.0	1	23	933	956	933	956	0.95
9	14	0.00032	0.033	15.2	1.4	2	23	1239	1260	1238	1260	0.97
10	14	0.024	2.5	9.2	4.5	1	23	1266	1289	1266	1289	0.97
11	14	0.0044	0.47	11.6	1.5	1	23	1329	1353	1329	1353	0.96
12	14	0.96	1e+02	4.2	4.5	1	23	1442	1465	1442	1465	0.94
13	14	0.012	1.2	10.3	0.4	2	23	1518	1539	1517	1539	0.94
14	14	0.0087	0.92	10.6	7.9	1	23	1545	1567	1545	1567	0.98

Sequence Information

Coding Sequence: ATGGCCTGTCTCGCAGGTGCCATCGCCCCTGTGCCAGCCGCCCCACGTTCAGTTACCACAGACAGCGGACTGGACCAACGTCAGAATAGTGAGACGCAAACGGACACAGATACGTCAGCTTCGGTCGACCAATCACGCTCAGCCCTAGTTTGTCCGGCTTGCTCATTAGTACTACCGAATACTCGTGAATTGACAAATCACATACGAGATCACAACTCGCCTCGTAGCAGCGACGGAAGTGCGGCCGAGGACGAGTGTTCCTGTAAAGTTTGCGGCAAGGTTCTTAGCTCGGCTAGTTCATTGGACCGTCATATCCTGGTCCACTCGGGAGAGCGACCGTTCAAGTGCCGACTCTGCGGACTCGCTTTTACAACAAACGGAAATATGCACCGTCACATAAGGACTGCCCACGCCGGTGGTAGCTCGCCGAACAGTTCTACGGATTCGGACGGTAGTAGCGACTCAGAAATGCCAATAACCAAGCGGAGAAGAATAGAGGAGttcaacaacaataataataacaacaataacgtTTCGAAGAGAAAATCACCCGAGTTTGTCGAGGAGATTGATCAAGGACAACGAAAGCACAAGAGTCTTTTGAACAACAACAATTCGAGAACGGAGGCTAAGAATGATCAGGTCCAGACGCGGAAGACCCACAACTATCCCGTTTGCGGGAGACAGAATTTCGAGACGAACGCACTTCCCGAGGAACACCTCGAACGCACTCAGCCGACACAGCATCCAGCAAAATGCGACACCTGTAACCTAAACTTCAAGGACGAGCGGGTGCTCAAGCATCATCGTTCGATGGGTCATCATTCCGATCGTTCGATCGACAGCCCGACGAGAAATCTTCGGAATTCGGTTGTTGGCTTCGACGATTTGACTTTTGTCGATTTTTCGTCCGGTAAATTCCCAACTATTGCTCGTGCCGTTTGCGAAAAATCACTTCATCGACCCGCGTCTGGGGAAGTTGCTAGATTCCAGTGCTGCAAGTGCCTCAGAGCCTTTCCGTGCAGGACTGCTCTAGACTCGCATGAAACTGACTGCGGGAATCAGAGCTCGCAGCCGAGAAGCATCACCGACGATCAATCCAAGAGAAACGACTTCTTCGCGGGACTAGATCTACAAAATAAGGCCGCTATCGCTGAAGCGAAGGAAGGAAAGGACTTGGCCGACATTCAGAGTATCATTTCGTTGACATCTGGACCAATActgcaaaatttttcgagaTCTGACGCCAGCACTCCGGACAACGTTATAAAGGTTGGGTCAAGCATCGGCTCTTCCGGTTCCTCCGGAACCACGTTCGCCGAAAACCACGAAGAGGAGGTGCAGGATGCGTTTTCAGCCGAGTTTCGTAGGATGAAACTTCGCGGTGAATTTCCCTGTCGACTTTGCACCGCTGTTTTTCCAAATCTACGTGCTCTGAAGGGACATAATCGGGCACACATGGGGGTCAGTCCGGGAACACCGTACCCCTGCAACATGTGCCCATACACGAGCACTGACAAAACCGCTCTGGTTAGACACCTCCGATCTCACAACGGCGATCGTCCTTACGAATGCTCATTGTGCAATTACGCGTTCACCACGAAAGCCAACTGCGAACGTCACCTTCGGAACCGCCACGCCAAACTAACCCGCGAAGATGTTAAGCGATCCATCATCTATCATTCCAGCGAAGACCCGCTTTACGATCACGGAGAAGCTCCACCGCGAGGGGTGCGAGATGACACACGTAGAATCCTCGTCTATCCGACCGAACGGGAGGACGGTAGTCAACAAAGAGCCAGCACCGGGTCTGACGCGAAGTCTGAGATCAGGGTAATCGATGAGGCGAAACTTTTGCAACCGGATCTTACAGCGCGAAACGCTCCGCTGTTGGGTCACTTCGATACGACGGAGATCTTTCACAAAACGGCACCGACTCAACCGCTCGAAATGCTCCCGAGGCACACCGAGAGTCttatggaaattgaaaaaccgCAGGATTTGGTAGCCAAGCAATCCTTCACCAAGAATACTGACGACCAGGACGACAACTCCTCGGACGAAAGTGTATCACCTCTAGTCACCGAAGCCAAACCAGCAATGCACCAAAGACTACTGGATGTTAGAATGGACCTTGAGACAACCGGTGGTCCCGATAGCTGCGGTGAAGACGCGCCTTTGGATTTGTCCATGGACGCTTTAGACTTGAGTAAAAAGTCGAAGGTTACGGAAACCGAAGCGGTCATCGCACCCGAAGAAGTTCACAGGAGCGAGAAAGATTTTTACAATGTAACGAATCACCTGCTCCTAACGCAAGCCCTACTTAAGAGTGGTCAGAACTCGCAGTCTCCCTCCTTGCAGGAGGCACTGCAGTACGCCAACGCTCACCTACTATGCCGCAACTTTGGAACATTCCCGCCTGTAATTGGGGCCGGACTGATGTCGTCCTATTTTATAAACCCGAACTTGTTTAGTCAAGACTTCAACATGAAGAGCAGATTGCAGAAGGACTTGTTCAAAGGTCTGCAGTGCAGTGGTGGTGGCATGGTTGAACCTCAAATTTCCAGGGCCGAGTTCGGATCCCCATTTTCTCAAAATAGAGACGCTTCATGCCACTCGGCGAGTGAAGATGCGGACTACTCCCCGAAGCTTATGTCCCCGAAGTTATCGAGCAAAGTAACAGCCTCTCGTGAAAAGCTTGAAAATTCACCCTCGTCAAATTCCGTGAAGATGGTCATCAAGAACGGAGTACTAATGCCCAAGCAAAAACAACGAAGATACAGAACGGAGCGACCATTTGCCTGCGAACATTGCTCGGCTAGGTTCACCCTAAGAAGCAACATGGAGAGGCACGTGAAACAACAACATCCGCAACACTGGAGCCAGAGACAACGTGGTGGACACTCAACCAGAGGACGACCTCCAACGAATCCACCAACGCTACTGCAGAGCTTGGGACAACCCGCGTCGCAATCGATGTCACAACACTACTCGAacattttaccaaaaattgaCCATTCCAGCTCAGTCCAGAATTACGGCAAACATGCCATCCCGGATCACGTTAAGTACGCGATTCTGGCCCAGCAATTGAAGGGCAATAATAAAGCGGAAGAGAATGACTCTGAAGAGGAGTTAGTCATCGATGAGGAACCCACTGAAGATGAAGCATCGGAATCTCGGGCACAGAATGACGAGCAGCAACCGTCGAGTCTGCTGAGAGGGAAACTAGAAGATCGGAGTGATTTCAACAAGGATAACATCATGAACCAGCACGTCAACGATTTTTCTAAAGAGTACTTGGTGCAGCTACAGGAGCAACATCTCGAGAGAATGAAACGGTACGAGACGGCAAAGTTATACGAGGCTAACGCGGACGAAAATTCCGATAAAGATGTCAAGGATGAACAGGAGGAAGAAGCCTCGAACGAGCAGAAGAAATCGGACGCCGAAGAACGCGCGGAAACTGAAGAAGAGACAGAGAAAACTGAGGACGGTGCTGTCGATCTTGCGAGCGTCTCCAGGCTGCTGGACAACGCCTCGCAACAATACCAGCAGTTTCAACCTCAGTATCTCAGCGACGAGGAAGAGGGGCTAGTCGCCTCAACTAGCGAAGGGAACAACTCCGGAAGCGACGAGAAGTCAGACTCCGGTAACTCCGAGTCTGTTCCCGGTAAGAAAAAGTCCGCTTACTCGTTGGCACCGAACAGAGTCTCGTGCCCGTACTGTCACAGAAAATTCCCATGGACGTCTTCGCTTAGGAGACACATCTTGACCCACACAGGTCAAAAACCTTACAAATGCACCTACTGCCCGCTGCTCTTCACAACTAAGTCAAACTGCGATCGTCATCTATTGCGAAAGCACGTGAACGCCAGCGCCAATAGCCAAGCTCAATCGTCCACTGCATCGTCATCGCCTGAGACCTCGACCGCTTTGGTAAACAGCAACGCATTCGCGATGAGAAACGTTCCGGAAAGACCCTACAAGTGCAACCAATGTCCAAGCTCGACATTTTCGACCTTGGGGAATCTAAAGAAGCATCTCTCCTCGAAACACACAACTGGCGAACTGAACTCCAGGTCACACAGTCCGCTCAGCGATCTCCAAAACAGTCCTAACGAATCTTTCAAACAAAATGATCAGAGTGGCTACGAAAGTCCTTCATCCAGCGTCGAAGAACCCGCACGTATCTCGCCAAGCATTACCGAAGATAACCACAAGGCCACACCCAACACATCGACCAGCGCCGATACACCACAATCTCTGAAGACATCCCCTGAGTCCGGATCCACAGTGTCTTCATGCTCCTCCGAGTTACCATTCAAATGTCACCTTTGCGATGGTAGTTTCGCCGACAGACAGGACTGCCTCGAACATATCAAACACGATCACAGATCAGAGTACAAACTCCTGCTGACAAAAGGCGCCCTAGACATGGCCGCTGAGACAGAGACCCACCCCGAAGAGCAACAACAACCACTGCAACAACACTGCGACGATGGAGAAGGTCAGCGTGGCAAGTTCCCGGATTACGCCAACAGAAAGGTAGTGTGCGCGTTCTGTATGCGGCGATTTTGGTCAGCCGAAGACCTTCGGCGACACATGCGAACGCATACGGGCGAGAGACCGTTCTCCTGTGATATTTGCCATCGGAAGTTTACCCTGAAGCACAGCATGCTGCGACACCGTAAAAAGCACGGTTCTATCCGTTCATCGATTTACACTGGGACTAGCGGTGACGAGGAAGCCTCCCCGACGACGCCTAtgaacaacaataacaacaataataacaacaacaataccGTAAAGACGCAAGAGATGGGAAACCTTCCTAGTACGGCACCGGGAGAAGGAACTCCCGTAAGATTTGGAGCGCATGACAAACTTGCCAGTCTTTCCGGGAAGCTTGCGAGCCTTCagaataacaacaataacgtCGAGGGTGAGGGAGACATCGATTTGATCTCAAATCTTTTAGACATTAGAGACAAAACCTTTATCGATAGGATTCTGCAAGCGTCACCGGACGACGCGGCCAAACTACTTGGCGTTCAAAGAGGCAACGAATAA
Protein Sequence: MACLAGAIAPVPAAPRSVTTDSGLDQRQNSETQTDTDTSASVDQSRSALVCPACSLVLPNTRELTNHIRDHNSPRSSDGSAAEDECSCKVCGKVLSSASSLDRHILVHSGERPFKCRLCGLAFTTNGNMHRHIRTAHAGGSSPNSSTDSDGSSDSEMPITKRRRIEEFNNNNNNNNNVSKRKSPEFVEEIDQGQRKHKSLLNNNNSRTEAKNDQVQTRKTHNYPVCGRQNFETNALPEEHLERTQPTQHPAKCDTCNLNFKDERVLKHHRSMGHHSDRSIDSPTRNLRNSVVGFDDLTFVDFSSGKFPTIARAVCEKSLHRPASGEVARFQCCKCLRAFPCRTALDSHETDCGNQSSQPRSITDDQSKRNDFFAGLDLQNKAAIAEAKEGKDLADIQSIISLTSGPILQNFSRSDASTPDNVIKVGSSIGSSGSSGTTFAENHEEEVQDAFSAEFRRMKLRGEFPCRLCTAVFPNLRALKGHNRAHMGVSPGTPYPCNMCPYTSTDKTALVRHLRSHNGDRPYECSLCNYAFTTKANCERHLRNRHAKLTREDVKRSIIYHSSEDPLYDHGEAPPRGVRDDTRRILVYPTEREDGSQQRASTGSDAKSEIRVIDEAKLLQPDLTARNAPLLGHFDTTEIFHKTAPTQPLEMLPRHTESLMEIEKPQDLVAKQSFTKNTDDQDDNSSDESVSPLVTEAKPAMHQRLLDVRMDLETTGGPDSCGEDAPLDLSMDALDLSKKSKVTETEAVIAPEEVHRSEKDFYNVTNHLLLTQALLKSGQNSQSPSLQEALQYANAHLLCRNFGTFPPVIGAGLMSSYFINPNLFSQDFNMKSRLQKDLFKGLQCSGGGMVEPQISRAEFGSPFSQNRDASCHSASEDADYSPKLMSPKLSSKVTASREKLENSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQHWSQRQRGGHSTRGRPPTNPPTLLQSLGQPASQSMSQHYSNILPKIDHSSSVQNYGKHAIPDHVKYAILAQQLKGNNKAEENDSEEELVIDEEPTEDEASESRAQNDEQQPSSLLRGKLEDRSDFNKDNIMNQHVNDFSKEYLVQLQEQHLERMKRYETAKLYEANADENSDKDVKDEQEEEASNEQKKSDAEERAETEEETEKTEDGAVDLASVSRLLDNASQQYQQFQPQYLSDEEEGLVASTSEGNNSGSDEKSDSGNSESVPGKKKSAYSLAPNRVSCPYCHRKFPWTSSLRRHILTHTGQKPYKCTYCPLLFTTKSNCDRHLLRKHVNASANSQAQSSTASSSPETSTALVNSNAFAMRNVPERPYKCNQCPSSTFSTLGNLKKHLSSKHTTGELNSRSHSPLSDLQNSPNESFKQNDQSGYESPSSSVEEPARISPSITEDNHKATPNTSTSADTPQSLKTSPESGSTVSSCSSELPFKCHLCDGSFADRQDCLEHIKHDHRSEYKLLLTKGALDMAAETETHPEEQQQPLQQHCDDGEGQRGKFPDYANRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICHRKFTLKHSMLRHRKKHGSIRSSIYTGTSGDEEASPTTPMNNNNNNNNNNNTVKTQEMGNLPSTAPGEGTPVRFGAHDKLASLSGKLASLQNNNNNVEGEGDIDLISNLLDIRDKTFIDRILQASPDDAAKLLGVQRGNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00939029;
90% Identity: iTF_00939886; iTF_01413680; iTF_01414481; iTF_01412616; iTF_00060622; iTF_00939029; iTF_01303711;
80% Identity: -