Basic Information

Insect: Ametastegia equiseti
Gene Symbol: Rreb1
Assembly: GCA_963989295.1
Location: OZ022391.1:17566806-17573593[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.09 11 7.5 0.0 2 23 50 71 49 71 0.95

2 14 0.00012 0.014 16.5 0.4 2 23 87 108 86 108 0.95

3 14 4.2e-06 0.00049 21.1 1.5 1 23 114 137 114 137 0.98

4 14 0.16 19 6.6 4.5 2 23 248 270 248 271 0.96

5 14 0.07 8.2 7.8 0.1 1 23 460 482 460 482 0.96

6 14 3.6e-05 0.0042 18.2 0.3 1 23 491 513 491 513 0.98

7 14 0.0008 0.094 13.9 3.1 1 23 519 542 519 542 0.97

8 14 0.0098 1.2 10.5 3.8 1 23 929 952 929 952 0.95

9 14 0.00032 0.038 15.2 1.4 2 23 1234 1255 1233 1255 0.97

10 14 0.024 2.9 9.3 4.5 1 23 1261 1284 1261 1284 0.97

11 14 0.0045 0.52 11.6 1.5 1 23 1324 1348 1324 1348 0.96

12 14 5.2 6.1e+02 1.9 4.4 1 23 1437 1460 1437 1460 0.91

13 14 0.012 1.4 10.3 0.4 2 23 1513 1534 1512 1534 0.94

14 14 0.0088 1 10.6 7.9 1 23 1540 1562 1540 1562 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.09	11	7.5	0.0	2	23	50	71	49	71	0.95
2	14	0.00012	0.014	16.5	0.4	2	23	87	108	86	108	0.95
3	14	4.2e-06	0.00049	21.1	1.5	1	23	114	137	114	137	0.98
4	14	0.16	19	6.6	4.5	2	23	248	270	248	271	0.96
5	14	0.07	8.2	7.8	0.1	1	23	460	482	460	482	0.96
6	14	3.6e-05	0.0042	18.2	0.3	1	23	491	513	491	513	0.98
7	14	0.0008	0.094	13.9	3.1	1	23	519	542	519	542	0.97
8	14	0.0098	1.2	10.5	3.8	1	23	929	952	929	952	0.95
9	14	0.00032	0.038	15.2	1.4	2	23	1234	1255	1233	1255	0.97
10	14	0.024	2.9	9.3	4.5	1	23	1261	1284	1261	1284	0.97
11	14	0.0045	0.52	11.6	1.5	1	23	1324	1348	1324	1348	0.96
12	14	5.2	6.1e+02	1.9	4.4	1	23	1437	1460	1437	1460	0.91
13	14	0.012	1.4	10.3	0.4	2	23	1513	1534	1512	1534	0.94
14	14	0.0088	1	10.6	7.9	1	23	1540	1562	1540	1562	0.98

Sequence Information

Coding Sequence: ATGGCCTGTCTCGCAGGTGCCATCGCCCCTGTGCCAGCCGCCCCACGTTCAGTTACCACAGAGAGCGGACTGGAGCAACGTCAGAATAGCGAGACGCAAACTGATACAGATACGTCAGCTTCGGTCGACCAATCCTGCTCAGCCCTCGTTTGTCCGGCGTGTTCACTTGTACTACCGAATACTCGTGAACTGACCAATCACATACGGGATCATAACTCACCTCGTAGCAGCGACGGAAGTGcagccgaagacgagtgctCTTGTCGAGTCTGCGGCAAGGTTCTTAGCTCGGCTAGTTCTTTGGACCGTCACATCCTGGTACATTCGGGAGAGCGACCCTTCAAGTGCAGGCTCTGCGGACTAGCTTTTACAACTAACGGAAATATGCACCGACACATCAGAACTGCCCACGGTGGCAGCTCACCTAACAGCTGTACGGATTCAGATGGAAGTACGGACTCGGAAAGACCGATACcaaaaaggagaagaataGAGGagttcaataataataacaacaacaataatgtttcgaagagaaaatcacCTGAGTGTGTTGACGAGCTTGATCAAGGACAACGAAAGCACAAGAGTCTTTTGAACAACAACTCGAGAACTGAACCGAAGAACGATCAGGTCCAGACGCGGAAGACCCACAGCTATCCCGTTTGTGTGAGACAAAATTTTGAGACATCCACCCTGCTAGATGAGACCCTGGAACGTACTCATCTGACGCATCCAGCGAAATGTGACACCTGCAACCTCAACTTCAAGGACGAACGGGTACTCAAGCATCATCGTTCGATGGGACATCATTCCGATCGTGCGATCGACAGCCCTACGAGAAACCTTCGAAATTCTGTTGTTGGATTCGACGATTTaactttcatcgatttttcgtCTGGTAAGTTTCCAACGATCGCTCGTGCTGTTTGTGAAAAATCACTTCATCGACCCGCGTCTGGAGAAGTCGCTAGATTTCAATGCTGCAAATGCCTTAGAGCTTTTCCGTGCAGGACTGCGCTAGATTCGCATGAAACTGACTGCGGAAATCAAAGCTCACAGCCAAGAAATATCGCCGATGACCAATCCAAAAGAAACGACTTCTTTGCGGGATTGGATCTGCAAAATAAGGCTGCTATCGCTGAGGCAAAAGAAGGAAAGGACTTGGCTGACATTCAAAGTATCATCTCGTTGACGTCGGGGCCAATACTGCAAAATTTTACGCGGTCTGATGCTAGCACTCCAGACAACGTGATAAAGATGGGATCAAGTATCGGCTCTTCTGGTTCGTCCGGAGCCGCTTCTGCTGAGAACCACGAAGATGAGGTACAGGATGCATTCTCAGCCGAATTTCGTAGGATGAAACTTCGCGGTGAATTTCCATGCCGACTTTGCACTGCTGTTTTTCCGAATCTACGTGCTCTCAAAGGTCACAATAGGGCACACATGGGGGTTAGTCCGGGAACACCGTACCCCTGCAACATGTGCCCTTACACTAGCACCGACAAAACCGCTCTGGTCAGACACTTACGATCTCACAACGGCGATCGTCCCTACGAATGCTCATTGTGCAATTACGCTTTCACAACAAAAGCAAACTGCGAACGTCACCTTCGGAATCGCCACGCAAAATTAACCCGCGAGGACGTGAAACGATCGATGATTTATCATTCGAGCGAAGACCCCCTTTATGAACACGGTGAAGCCCCGCCGCGAGGCGTCCGCGAAGATACGCGTAGAGTTCTCGTCTACCCAACAGAGCGCGAGGAAAGTAGTCAGCAGAAATCTAGCTTCGGGTCTGACGGAAAGACTGAGATAAGGGTAATCGACGAGGCGATACTTCGGCAACCGGATCTTACCGTACGGCACACTCCGCAGTTGGGTCACTTTGATACGCCAGAGATATTTCAAAGAACACCACCGATCCAACCACTCGAAATTATGTCAAAACATACAGAGAGCTTAATGGAAAGTGAAAAACCTCAAGACTTGGCCTCCAAGCAATCCCTAACCAATAATACCGACGACCAGGATGACAATTCCTCGGACGAAAGCGTATCACCTCTAGTCACCGAAGCCAAACCAGCAATCCACCAAAGACTACTGGATGTTCGAATGGACCTTGAACCGACCGGTGGTCCAGATAGCTGCGGCGAAGATGCGCCGTTGGATTTGTCAATGGACGCTTTGGACTTGAGTAAAAAGTCCAAGGCTCGGGAAAGCGAGACGATTGTTACATCCGAAGAAGTTCACAGGAATGAAAAGGATATTTATAATGCAACGAATCACCTGCTTCTAACACAAGCCCTGCTTAAAAGTGGTCAAAACTCTCAATCTACCTCGTTGCAGGAGGCACTTTACGCCAATGCTCATCAGCTACTGTACCGGAATTTTGGAACCTTTCCTGCTGGGATTGGAGCTGGACTCATACCACCGTACTTATTCAATCCGCATTTATTCAATCAAGACTTCACCATGAAGAGTAGATTGCAGAAAGAGTTGATCAAAGGCCTGCAATGCAGCGGCGGTAGTATGGTTGAGCCTCAAATTCCCAGGGGTGAGTTTGGAGCACCTTTTTCTCAAAGCAGAGATGCTTCATGCCACTCAGCTAGTGAGGATGCGGATTACTCTCCGAAATTGATGTCGCCGAAGTTATCGAGCAAGGTAGCAGCCTCTCgcgaaaaacttgaaaattcgcCGTCGTCAAATTCCGTGAAGATGGTTATCAAGAACGGAGTTCTAATGCCGAAGCAAAAACAACGAAGATACAGAACTGAGCGACCTTTTGCCTGTGAACATTGCTCGGCCAGGTTCACACTCAGAAGCAATATGGAGAGACACGTTAAACATCAACATCCTCAACACTGGAGCCAAAGACAACGCGGTGGTCATTCGACCAGAGGCCGACCTCCCACAAATCCACCAACGCTATTGCAAAGCTTGTCGCAACCTGCCTCTCAATCTATGTCACAACACTATTCCAACATTTTGCCTAAAATCGATCATTCCAATTCAGTCCAGAATTACGGTAAACATTCCATTTCTGATCAAGTCAAGTACGCGATACTTGCCCAACAATTAAAGGGCAATAAAGTTGAGGAAAACGATTCCGAAGAGGAGTTAGTCATCGACGAGGAACCCACAGAAGATGAAACATCGGAATCCCGGGCACAGAATGACGATCAGCAACCATTGAGCTTGTTGAGAGGAAAACTCGAGGATCGAAGTGATTTGAATAAGGATAGCATTATGAAACAGCACGTCAATGAATTTTCCAAGGAATATTTGGTACAGCTGCAGGAGCAGCATGTCGAAAGAATGAAACGATACGAAGACGCCAAGTTGTACGAGGCAAATGCAGACGAAAGGTCTGAAAAAGATGTCAAGGATGAGTTGGAGGAGGACGTGCTGgacgagaggaaaaaatccGATGGTGAAGATCACGCAGACTCTGAAGATGAGACGGAAAAAACTGAGGATGGTGCGGTTGATCTTGCTAGCGTATCTAGACTACTGGACAACGCATCGCAACAATACCAGCAGTTTCAACCTCAGTATCTCAGTGACGAGGAAGAGGGACTCGTTGCCTCAACTAGCGAAGGCAACAACTCCGGAAGTGACGAGAAATCGGACTCCGGTAACTCCGAGTCCGTTCCCGGTAAGAAGAAGTCCGCGTATTCATTGGCACCGAATAGAGTCTCGTGCCCGTACTGTCACAGGAAATTTCCGTGGACATCATCACTGAGGAGGCACATCCTGACCCACACCGGCCAAAAACCCTATAAGTGCACCTACTGCCCGCTGCTATTCACAACTAAATCAAACTGCGACCGTCATCTATTGAGAAAACACGTAAACGCTAGTGCCAGTAGCCAGGGCCAGTCATCAGCTGCGTCGTCGTCACCTGAGACATCAACTGCCTTGGTTAACAGCAACGCTTTTGCGATGAGAAATGTTCCGGAGAGACCTTACAAGTGCAACCAATGTCCAAGCTCGACATTCTCGACTTTAGGAAACCTAAAGAAGCATCTTTCTTCAAAACACACAACCGGTGGAATGAACTCTAGGTCTGACAGTCCGCTCAGCGATCCTCAAAACAGTCCGAACGAATCTTTGAAACATAATGATCAGAGTGGATATGAAAGTCCTTCATCAAGCGTAGAAGAAACGGTTCGTATCTCTCCAAGCATTCCCGAAGATAACCATAAGGCCACACCGAACACCTCGACCAACGCCGACACACCACAATCACTGAAAACGTCTCCGGAGTGCGGATCCACCGTGTCCTCTTGCTCCTCTGAATTACCATTCAAATGTCACCTCTGCGATGGAAGCTTCGCCGAAAGGCAGGACTGCCTCGAGCACATTAAACACGATCACAGATCAGAGTACAAACTCCTGCTTACCAAGGGCGCCTTGGACATGGCTGCTGAGACGGAAACCCACCCcgaagaacaacaacaaccagTGCAGCAACAATGCGATGATGGGGAAGGACAGCGTGGCAAATTTCCCGATTACGCCAACAGAAAGGTGGTGTGCGCGTTTTGTATGCGTCGATTCTGGTCGGCCGAAGATCTTCGGCGACATATGCGTACGCATACGGGAGAGAGACCATTCTCCTGTGATATTTGTCATCGTAAATTCACTCTGAAGCACAGTATGCTACGACACCGTAAAAAGCACGGATCTATACGTTCGTCGATTTACACTGGAACTAGCGGGGACGAAGAAGCTTCACCTACGGCACCGAtgaacaacaataataacaataacaacaacaacaataccGTCAAGACACAAGAAATGGCAACGAACCATCCTAGTACGGCACCCGGCGATTCAACTCCTGTACGATTTGGAACGCATGAAAAACTTGCCACTCTTTCTGGGAAATTGGCAAGCCTTcagaacaacaacaataacgtCGAGGGTGAGGGAGATATCGATTTGATCTCAAATCTTTTAGATATTAGAGACAAAACTTTCATAGACAGAATTTTGCAGGCGTCTCCTGATGACGCTGCCAAACTACTTGGCGTTCAGAGGGGCAACGAATAG
Protein Sequence: MACLAGAIAPVPAAPRSVTTESGLEQRQNSETQTDTDTSASVDQSCSALVCPACSLVLPNTRELTNHIRDHNSPRSSDGSAAEDECSCRVCGKVLSSASSLDRHILVHSGERPFKCRLCGLAFTTNGNMHRHIRTAHGGSSPNSCTDSDGSTDSERPIPKRRRIEEFNNNNNNNNVSKRKSPECVDELDQGQRKHKSLLNNNSRTEPKNDQVQTRKTHSYPVCVRQNFETSTLLDETLERTHLTHPAKCDTCNLNFKDERVLKHHRSMGHHSDRAIDSPTRNLRNSVVGFDDLTFIDFSSGKFPTIARAVCEKSLHRPASGEVARFQCCKCLRAFPCRTALDSHETDCGNQSSQPRNIADDQSKRNDFFAGLDLQNKAAIAEAKEGKDLADIQSIISLTSGPILQNFTRSDASTPDNVIKMGSSIGSSGSSGAASAENHEDEVQDAFSAEFRRMKLRGEFPCRLCTAVFPNLRALKGHNRAHMGVSPGTPYPCNMCPYTSTDKTALVRHLRSHNGDRPYECSLCNYAFTTKANCERHLRNRHAKLTREDVKRSMIYHSSEDPLYEHGEAPPRGVREDTRRVLVYPTEREESSQQKSSFGSDGKTEIRVIDEAILRQPDLTVRHTPQLGHFDTPEIFQRTPPIQPLEIMSKHTESLMESEKPQDLASKQSLTNNTDDQDDNSSDESVSPLVTEAKPAIHQRLLDVRMDLEPTGGPDSCGEDAPLDLSMDALDLSKKSKARESETIVTSEEVHRNEKDIYNATNHLLLTQALLKSGQNSQSTSLQEALYANAHQLLYRNFGTFPAGIGAGLIPPYLFNPHLFNQDFTMKSRLQKELIKGLQCSGGSMVEPQIPRGEFGAPFSQSRDASCHSASEDADYSPKLMSPKLSSKVAASREKLENSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKHQHPQHWSQRQRGGHSTRGRPPTNPPTLLQSLSQPASQSMSQHYSNILPKIDHSNSVQNYGKHSISDQVKYAILAQQLKGNKVEENDSEEELVIDEEPTEDETSESRAQNDDQQPLSLLRGKLEDRSDLNKDSIMKQHVNEFSKEYLVQLQEQHVERMKRYEDAKLYEANADERSEKDVKDELEEDVLDERKKSDGEDHADSEDETEKTEDGAVDLASVSRLLDNASQQYQQFQPQYLSDEEEGLVASTSEGNNSGSDEKSDSGNSESVPGKKKSAYSLAPNRVSCPYCHRKFPWTSSLRRHILTHTGQKPYKCTYCPLLFTTKSNCDRHLLRKHVNASASSQGQSSAASSSPETSTALVNSNAFAMRNVPERPYKCNQCPSSTFSTLGNLKKHLSSKHTTGGMNSRSDSPLSDPQNSPNESLKHNDQSGYESPSSSVEETVRISPSIPEDNHKATPNTSTNADTPQSLKTSPECGSTVSSCSSELPFKCHLCDGSFAERQDCLEHIKHDHRSEYKLLLTKGALDMAAETETHPEEQQQPVQQQCDDGEGQRGKFPDYANRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICHRKFTLKHSMLRHRKKHGSIRSSIYTGTSGDEEASPTAPMNNNNNNNNNNNTVKTQEMATNHPSTAPGDSTPVRFGTHEKLATLSGKLASLQNNNNNVEGEGDIDLISNLLDIRDKTFIDRILQASPDDAAKLLGVQRGNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00939029;
90% Identity: iTF_01411826;
80% Identity: -