Basic Information

Insect: Tenthredo mesomela
Gene Symbol: RREB1
Assembly: GCA_943736035.1
Location: CALSEY010000240.1:248692-255346[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.058 12 7.9 0.0 2 23 51 72 50 72 0.96

2 14 2.9e-05 0.0061 18.3 0.5 2 23 88 109 87 109 0.96

3 14 3.7e-06 0.00077 21.1 1.5 1 23 115 138 115 138 0.98

4 14 0.15 31 6.6 4.5 2 23 250 272 250 273 0.96

5 14 0.062 13 7.8 0.1 1 23 462 484 462 484 0.96

6 14 3.2e-05 0.0066 18.2 0.3 1 23 493 515 493 515 0.98

7 14 0.00072 0.15 13.9 3.1 1 23 521 544 521 544 0.97

8 14 0.0022 0.46 12.4 2.0 1 23 931 954 931 954 0.95

9 14 0.00029 0.06 15.2 1.4 2 23 1233 1254 1232 1254 0.97

10 14 0.022 4.5 9.3 4.5 1 23 1260 1283 1260 1283 0.97

11 14 0.004 0.83 11.6 1.5 1 23 1323 1347 1323 1347 0.96

12 14 4.6 9.6e+02 1.9 4.4 1 23 1436 1459 1436 1459 0.91

13 14 0.01 2.2 10.3 0.4 2 23 1512 1533 1511 1533 0.94

14 14 0.0079 1.6 10.6 7.9 1 23 1539 1561 1539 1561 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.058	12	7.9	0.0	2	23	51	72	50	72	0.96
2	14	2.9e-05	0.0061	18.3	0.5	2	23	88	109	87	109	0.96
3	14	3.7e-06	0.00077	21.1	1.5	1	23	115	138	115	138	0.98
4	14	0.15	31	6.6	4.5	2	23	250	272	250	273	0.96
5	14	0.062	13	7.8	0.1	1	23	462	484	462	484	0.96
6	14	3.2e-05	0.0066	18.2	0.3	1	23	493	515	493	515	0.98
7	14	0.00072	0.15	13.9	3.1	1	23	521	544	521	544	0.97
8	14	0.0022	0.46	12.4	2.0	1	23	931	954	931	954	0.95
9	14	0.00029	0.06	15.2	1.4	2	23	1233	1254	1232	1254	0.97
10	14	0.022	4.5	9.3	4.5	1	23	1260	1283	1260	1283	0.97
11	14	0.004	0.83	11.6	1.5	1	23	1323	1347	1323	1347	0.96
12	14	4.6	9.6e+02	1.9	4.4	1	23	1436	1459	1436	1459	0.91
13	14	0.01	2.2	10.3	0.4	2	23	1512	1533	1511	1533	0.94
14	14	0.0079	1.6	10.6	7.9	1	23	1539	1561	1539	1561	0.98

Sequence Information

Coding Sequence: ATGGCCTGTCTCGCAGGTGCCATCGCCCCTGTGCCAGCCGCCCCACGTTCAGTTACCACAGACAGCGGACTGGAGCAACGTCAGAATAGTCAGACGCAAACGGACACAGATACGTCAGCTTCGGTCGACCAATCACGCTCAGCAGCCCTCGTTTGTCCGGCTTGCTCATTAGTACTACCGAATACTCGTGAATTGACAAATCACATACGAGAACACAACTCGCCTCGTAGCAGCGACGGAAGTGCAGCCGAGGACGAGTGCTCCTGTAAAGTTTGCGGCAAGGTACTTAGCTCGGCTAGTTCCCTGGATCGTCATATCCTGGTCCACTCTGGAGAGCGACCCTTCAAGTGCAGACTCTGCGGACTCGCTTTTACAACAAACGGAAATATGCACCGTCACATAAGGACTGCCCACGGTGGCAGCTCGCCGAACAGTTGTACGGATTCGGACGGTAGTAGCGACTCGGAAATGCCAATAACCAAACGCAGAAGGATAGAGGAGTTCAACAACAATAATAACAACAACAATAACGTTCCGAAGAGAAAATCACCCGAGTGTGTTGAGGAGATTGATCAAGGACAACGAAAACACAAGAGTCTTTTGAACAACAACTCGAGAACGGAGGCGAAGAATGATCAGGTCCAGACGCGGAAGACCCACAACTACCCCGTATGCGGGAGACAGAATTTCGAGACGAACGCCCTTCCCGAGGAACACCTCGAACGCACTCAGCCGACACATCCAGCAAAATGTGACACCTGCAACCTGAACTTCAAGGATGAGCGGGTGCTCAAACATCATCGTTCGATGGGTCATCATTCAGATCGGTCGATCGACAGCCCGACGAGAAACCTTCGAAACTCTGTTGTTGGCTTCGACGATTTGACTTTTGTCGATTTTTCATCTGGTAAATTCCCAACGATTGCTCGTGCCGTTTGTGAAAAATCACTTCACCGACCCGCATCCGGAGAAGTTGCTAGATTCCAGTGCTGCAAGTGCCTCAGAGCTTTCCCGTGCAGGACTGCTTTAGACTCGCATGAAACTGACTGCGGAAATCAGAGCTCGCAGCCGAGAAGCATCACCGACGATCAGTCAAAGAGAAACGACTTTTTCGCCGGATTAGATCTACAAAATAAGGCCGCTATCGCTGAAGCGAAGGAAGGAAAGGACTTGGCCGACATTCAGAGTATCATTTCGTTGACCTCCGGACCAATATTACAAAATTTTTCGAGATCTGACGCCAGCACTCCGGACAACGTCATAAAAGTCGGGTCGAGCATCGGCTCTTCCGGTTCCTCCGGAACAACGTCCGCCGAAAACCACGAAGAGGAGGTGCAGGATGCGTTTTCAGCCGAGTTTCGTAGGATGAAACTTCGCGGTGAATTTCCCTGTCGACTTTGCACCGCTGTTTTTCCAAATCTACGTGCTCTGAAGGGGCACAATCGGGCACACATGGGGGTCAGTCCGGGAACACCGTACCCCTGCAACATGTGCCCATACACGAGCACTGACAAAACAGCTTTGGTTAGACACCTCCGATCCCACAACGGCGATCGTCCTTACGAATGCTCATTGTGCAATTACGCATTCACCACGAAAGCCAACTGCGAACGTCACCTTCGGAACCGCCACGCCAAACTAACCCGCGAGGACGTTAAACGATCTATCATCTATCATTCCAGCGAAGACCCGCTTTATGATCACGGAGAAGCTCCACCGCGAGGGGTGCGAGATGACACACGCAGAGTCCTCGTCTACCCAACAGAACGGGAGGATAGTAATCAGCAAAGAGCCAGTACCGGGTCTGACGCGAAGTCTGAGATCAGGGTAATCGATGAGGCGAAACTTTTGCAACCGGATCTTACCGCGCGGAGCGCTCCGCTGTTGAGTCACTTTGATACGACGGAGATCTTTCACAAAACGCCACCAACTCAACCGCTCGAAATGCTCCCGAGGCACACCGAGAGTCTTATGGAAATTGAAAAACCACAGGATTTGGTAGCCAAGCAATCCTTTACCAAGAATACCGACGACCAGGACGACAACTCCTCGGACGAAAGCGTATCACCTCTAGTCACCGAAGCCAAACCAGCAATGCACCAAAGACTACTGGATGTTAGAATGGACCTCGAGACAGCAGGTGGTCCCGATAGCTGCGTCGAAGACGCACCTTTGGACTTGTCCATGGACGCTTTGGACCTAAGTAAAAAGTCCAAGGTTACGGAAACCGAACCGGTCATCGCACCCGAAGAAGTTCACAGGAGCGAGAAAGATTTTTACAATGTAACGAATCACCTGCTCCTAACACAAGCCCTACTTAAGAGTGGTCAAAACTCGCAATCTCCCTCTTTGCAGGAGGCACTGCAGTACGCCAACGCTCAACTACTCTGCCGCAACTTCGGAACATTCCCGCCTGTAATTGGGGCCGGATTGATGTCGTCCTATTTTATAAACCCGAACTTGTTTAGTCAAGACTTCAATATGAAGAGCAGATTGCAGAAAGACTTGTTCAAAGGCCTGCAGTGCAGTGGTGGCGGTATGGTTGAACCTCAAATTTCCAGGGGCGAGTTCGGATCACCATTCTCTCAAAACAGAGACGCTTCATGCCACTCGGCGAGTGAAGATGCGGACTACTCCCCGAAGCTACTGTCCCCGAAATTATCAAGCAAAGTAACAACCTCCCGTGAAAAGATTGAAAATTCACCCTCGTCAAATTCCGTGAAGATGGTCATTAAGAACGGAGTTCTAATGCCGAAGCAAAAACAACGAAGATACAGAACGGAGCGACCATTTGCCTGCGAACATTGCTCGGCTAGGTTCACCCTAAGAAGCAACATGGAGAGGCACGTGAAACAACAACATCCGCAACACTGGAGCCAAAGACAACGTGGTGGTCACTCGACCAGAGGACGACCTCCCACCAATCCACCAACGCTACTGCAGAGCTTGGGACAACCCGCATCACAATCAATGTCACAACACTATTCGAACATTCTACCAAAAATTGACCATTCCAGCTCAGTCCAAAATTACAGCAAGCACGCCATCCCGGATCACGTTAAATACGCGATTCTGGCCCAGCAATTAAAGGGCAATAATAAAGCAGAAGAGAATGACTCTGAAGAGGAGTTAGTCATCGATGAGGAACCCACAGAAGATGAAGCATCGGAATCTCGGGCACAGAATGATGAGCAGCAACCATCGAGTCTGCTAAGAGGGAAACTAGAAGATCGGAGCGATTTTAACAAGGATAACATCATGAATCAGCACGTCAACGATTTTTCTAAAGAGTACCTCGTGCAGCTACAGGAGCAGCATCTCGAGAGAATGAAACGGTACGAAAACGCAAAGTTGTACGAGGCTAACGTGGACGAAAATTCCGAAAAAGATGTCAAAGATGAACTGGAGGAAGAAGCCTCGGAGGAGCAGAAGAAATCGGATTCCGAAGAACGCGCAGAAACTGAAGAAGAGACAGAAAAAACTGAGGACCTTGCGAGCGTCTCTAGGCTGCTGGACAACGCCTCACAACAGTACCAGCAGTTTCAACCTCAGTATCTTAGCGACGAGGAAGAGGGGCTAGTCGCCTCAACTAGCGAAGGGAATAACTCCGGAAGTGACGAAAAGTCAGACTCCGGTAACTCCGAATCTGTTCCCGGTAAGAAAAAGTCCGCTTACTCGTTGGCGCCGAATAGAGTCTCGTGCCCGTACTGTCACAGAAAATTCCCATGGACGTCCTCGCTGAGGAGACACATCTTGACCCACACCGGTCAAAAACCTTACAAATGCACCTACTGCCCGCTGCTCTTCACAACTAAGTCAAACTGCGATCGCCATCTATTGCGAAAGCACGTGAACGCCAGCGCCAGTAGCCAGGCCCAACCACCCACCGCATCGTCATCGCCGGAGACCTCGAGCACTTTGGTCAACAGTAATGCATTCGCGATGAGAAACGTTCCGGAAAGACCTTACAAGTGCAACCAATGTCCAAGCTCGACATTTTCGACCTTGGGGAATCTCAAGAAGCATCTCTCCTCGAAGCACACAACTGGCGGACTGAACTCCAGGTCGCACAGTCCGCTCAGCGATCTCCAAAACAGTCCGAACGAATCTTTGAAACAAAATGATCAGAGTGGCTACGAAAGTCCTTCATCAAGCATCGAAGAACCCGCTCGTATCTCGCCAAGCATTACCGAAGATAATCACAAGGCCACACCCAACACCTCGACCAGCGCCGATACACCACAATCTCTGAAGACATCCCCGGAGTCCGGATCCACCGTGTCTTCATGCTCCTCCGAGTTACCTTTCAAATGTCATCTTTGCGATGGCAGTTTCGCCGAAAGACAGGACTGCCTTGAACACATCAAACACGATCACAGATCTGAGTACAAACTCCTGCTGACAAAAGGCGCCCTAGACATGGCTGCTGAGACAGAGACCCACCCCGAAGAGCAACAACAACCACCACAACAACACTGCGACGATGGAGAAGGTCAGCGTGGCAAATTCCCGGATTACGCCAACAGAAAGGTGGTGTGCGCGTTCTGTATGCGTCGATTCTGGTCAGCCGAAGATCTTCGGCGACACATGCGAACGCATACGGGCGAAAGACCGTTCTCCTGTGATATTTGCCATCGGAAGTTTACCCTGAAGCACAGCATGCTACGACACCGTAAAAAGCACGGTTCTATACGTTCATCGATTTACACTGGGACTAGCGGCGACGAGGAAGCCTCCCCGACGACGCCTATGAACAACAATAACAACAATAATAACAACAACAATACTGTTAAGACGCAAGAGATGGGAAACCTTCCTAGTACAGCACCGGGAGAAGGAACTCCCGTAAGATTTGGAGCACATGACAAACTTACCAGTCTTTCTGGCAGGCTTGCGAGCATTCAGAATAACAACAACAACGTCGAGGGTGAGGGAGACATCGATTTGATCTCAAATCTTTTAGACATTAGAGACAGCACCTTTATTGATAGGATTTTGCAAGCGTCACCTGACGACGCGGCCAAACTACTTGGCGTTCAAAGAGGCAACGAATAG
Protein Sequence: MACLAGAIAPVPAAPRSVTTDSGLEQRQNSQTQTDTDTSASVDQSRSAALVCPACSLVLPNTRELTNHIREHNSPRSSDGSAAEDECSCKVCGKVLSSASSLDRHILVHSGERPFKCRLCGLAFTTNGNMHRHIRTAHGGSSPNSCTDSDGSSDSEMPITKRRRIEEFNNNNNNNNNVPKRKSPECVEEIDQGQRKHKSLLNNNSRTEAKNDQVQTRKTHNYPVCGRQNFETNALPEEHLERTQPTHPAKCDTCNLNFKDERVLKHHRSMGHHSDRSIDSPTRNLRNSVVGFDDLTFVDFSSGKFPTIARAVCEKSLHRPASGEVARFQCCKCLRAFPCRTALDSHETDCGNQSSQPRSITDDQSKRNDFFAGLDLQNKAAIAEAKEGKDLADIQSIISLTSGPILQNFSRSDASTPDNVIKVGSSIGSSGSSGTTSAENHEEEVQDAFSAEFRRMKLRGEFPCRLCTAVFPNLRALKGHNRAHMGVSPGTPYPCNMCPYTSTDKTALVRHLRSHNGDRPYECSLCNYAFTTKANCERHLRNRHAKLTREDVKRSIIYHSSEDPLYDHGEAPPRGVRDDTRRVLVYPTEREDSNQQRASTGSDAKSEIRVIDEAKLLQPDLTARSAPLLSHFDTTEIFHKTPPTQPLEMLPRHTESLMEIEKPQDLVAKQSFTKNTDDQDDNSSDESVSPLVTEAKPAMHQRLLDVRMDLETAGGPDSCVEDAPLDLSMDALDLSKKSKVTETEPVIAPEEVHRSEKDFYNVTNHLLLTQALLKSGQNSQSPSLQEALQYANAQLLCRNFGTFPPVIGAGLMSSYFINPNLFSQDFNMKSRLQKDLFKGLQCSGGGMVEPQISRGEFGSPFSQNRDASCHSASEDADYSPKLLSPKLSSKVTTSREKIENSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQHWSQRQRGGHSTRGRPPTNPPTLLQSLGQPASQSMSQHYSNILPKIDHSSSVQNYSKHAIPDHVKYAILAQQLKGNNKAEENDSEEELVIDEEPTEDEASESRAQNDEQQPSSLLRGKLEDRSDFNKDNIMNQHVNDFSKEYLVQLQEQHLERMKRYENAKLYEANVDENSEKDVKDELEEEASEEQKKSDSEERAETEEETEKTEDLASVSRLLDNASQQYQQFQPQYLSDEEEGLVASTSEGNNSGSDEKSDSGNSESVPGKKKSAYSLAPNRVSCPYCHRKFPWTSSLRRHILTHTGQKPYKCTYCPLLFTTKSNCDRHLLRKHVNASASSQAQPPTASSSPETSSTLVNSNAFAMRNVPERPYKCNQCPSSTFSTLGNLKKHLSSKHTTGGLNSRSHSPLSDLQNSPNESLKQNDQSGYESPSSSIEEPARISPSITEDNHKATPNTSTSADTPQSLKTSPESGSTVSSCSSELPFKCHLCDGSFAERQDCLEHIKHDHRSEYKLLLTKGALDMAAETETHPEEQQQPPQQHCDDGEGQRGKFPDYANRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICHRKFTLKHSMLRHRKKHGSIRSSIYTGTSGDEEASPTTPMNNNNNNNNNNNTVKTQEMGNLPSTAPGEGTPVRFGAHDKLTSLSGRLASIQNNNNNVEGEGDIDLISNLLDIRDSTFIDRILQASPDDAAKLLGVQRGNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00939029;
90% Identity: iTF_01411826;
80% Identity: -