Tnyl009186.1
Basic Information
- Insect
- Temnothorax nylanderi
- Gene Symbol
- tfip11
- Assembly
- GCA_030848795.1
- Location
- JASTWM010000073.1:216652-220247[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-101 4.7e-97 326.2 17.3 1 275 387 654 387 654 0.98 2 2 0.018 4.1e+02 1.7 0.1 158 189 667 697 659 706 0.56
Sequence Information
- Coding Sequence
- ATGTCTGAGGACGAAGTGGAGAGCTTCGAAATCACCGATTATGATTTAGAGAATGAATTTAATATAGCTCGTCCCCGACGCAAACTCTCGAAGAAACAGCAAATGCTAGGAATATGGGCAGATGACAGCGATGAAGATGAATTATCTGCCAGACCATCTTTCAAAACCTTTAACAAGGGTCCCAAAAATTATACGGCGCCGGTTAGTTTTGTCGCTGGTGGTATCCAACAGGCGGGACAAccaaaagagaaagaagacaaGGATGACGAAGAAGATGACGAAGAGATGCGGGAGACAAGGCACAGTAGCTCGAGttCAGAAGATGAGAGGTCAAATAGTTCCAAACGTCCATCCTTTGCCTTGACCTTGGACAGTGACATCGCAGGCCTGCGTAAAAAGCGCAATCAAGTTAATCCATTGCTGATGAAAACTGGAATGGGTAGTTGGGAAATGCATACAAAAGGCATTGGCGCTAAATTATTGCTGCAGatggGATTTGAACCTGGTAAAGGTTTAGGTAAACAATTACAAGGAATAAGCGCGCCAGTGGAGGCACATCTCAGAAAAGGAAGAGGCGCGATTGGCGCGTATGGTCCCGAAAAGACACCAAAGATTCCCGAGAAAAAGAAGGATGACGATGGGGAGGAAACAAAAGAATCCAAGTCCAAGGTATCTCAATGGCGGAAGGGTGATACCAGTAACAAGAAAAAAGTCAGATACTGCTATAGAAGTGTGGATCAAGTTTTGGAAGATGGAAAACTGAAGCCTAACAGAAAAGCTCCAGTGTCTAGCGATATGAGTAGAGTTAAAGTTATTGATATGACAGGGCCAGAACAAAGGATTCTTAGCGGATATCATGCGATAGCTGGTGGTCAACAGTGTCCTGATGAGACCGTAATTACGTCCGACAAGAAATCGAAAGTGAACTTTGCCCTGCCCGAATTGcaacataatttaaatttactcGTGGACATGTGTGAGCAAGATATTATTCAAAACGATCGGCGAATGAGGCATTTAAATGATAGAATGGTTGCTTTAGAAGCggagaaaaagaatttatccAAAGTCGTGGATCAGCATAGTCAATTGATCGACACCTTAGAAAATGTGCTTGTAATTGTGGATAGATTGACGAATGAGACGAACGAATTGTCGCTGCAAGAAACCGCGGAGGCTTTCAAAAATTTGCAAGACAATTATTACGAAGAGTACAAAATGTACGAACTCAGTGAATTAGCCAGCAGTTTTGTAGCACCAAAGATAAAAGATTGTCTGCTCACTTGGAATCCATTGATGCAACCGAAACAGCCAATTAAGTTATTTGAACAATGGAAGAGTATCTTAGAGAGTGGAGTTAGTACGCTTCAGACACGGACTATGCATTCATACGATCAACTAGTATGGAATGCTTGGATGCCGTCGATCAGAGGAGCCATACAGCAGTGGACATGTAGACAGCCCGAGCCTTTAATTGAGTTAATAGAGTACTGGATGCCGCTATTACCTAATTGGATAATGGAAAATATACTAGATTTATTAGTGTTACCGAAATTGACACTGGAGGTGGAAGAATGGAATCCTCTTACCGATACTGTACCTATTCACACATGGATTCATCCTTGGTTGCCGTTattacGAAATCGTTTAGATACGTTAATTTATCCAATAATACGTCGAAAACTCGGATCTGCATTAGGAGGTTGGCATCCGTCAGACAGATCCGCTAGATTAATGCTGCAACCTTGGGCAGAGGTGTTCGCCAAGGGAGACATGGAGGCGTTTTTAGTGAAGAATATTATtccaaaattgcaaataaccTTATCCGAGTTCGTCATAAATCCACATCAACAGCACTTGGATCAATGGAATTGCGTGTATGAGTGGAAGGAATTGATCCCTGTTCATATCATGGCAGGATTGCTCGATAAATTCTTTTTCCCAAAATGGCTACAAGTCTTGGCACTTTGGCTCAATCATTCGCCTAATTATGATCAAGTTATAACATGGTACTTgaattggaaaaaaatgttgagcGAAAAGTTACTGGCGGAACCAGTAATAAAAGAGCACTTGAAGAAAGCATTGGACATGATGAATAGGGCCGTCAATGGGTCACAAAATCATCAACCTGGCGCACTAGAACAggttttgtatttaataagttTAGAGAGAACTCAGCCGACGATGTCTCAGATGGCACCGATTGCGCAGCCGAGAATGGAGAGACTCGCAGAGGCGGTACGAACGGCCTCGCAGATTCCGCAGGGTTTCAAAGATTTCGTACAAAAGAAATGCGAAGAGAGaggtatattatttatgcCGATCCCGAACAGATATAAGGAGGCTAAGCAAGTGTACAAAGTAGGCAATGTTCAGGCGTATATCGACAGCAATGTCTTATTCGTATGTCATAATGGTACAAATTGGATGCCAACGCATTTAAATGCTTTGCTGGACATGTCTGaactttaa
- Protein Sequence
- MSEDEVESFEITDYDLENEFNIARPRRKLSKKQQMLGIWADDSDEDELSARPSFKTFNKGPKNYTAPVSFVAGGIQQAGQPKEKEDKDDEEDDEEMRETRHSSSSSEDERSNSSKRPSFALTLDSDIAGLRKKRNQVNPLLMKTGMGSWEMHTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEAHLRKGRGAIGAYGPEKTPKIPEKKKDDDGEETKESKSKVSQWRKGDTSNKKKVRYCYRSVDQVLEDGKLKPNRKAPVSSDMSRVKVIDMTGPEQRILSGYHAIAGGQQCPDETVITSDKKSKVNFALPELQHNLNLLVDMCEQDIIQNDRRMRHLNDRMVALEAEKKNLSKVVDQHSQLIDTLENVLVIVDRLTNETNELSLQETAEAFKNLQDNYYEEYKMYELSELASSFVAPKIKDCLLTWNPLMQPKQPIKLFEQWKSILESGVSTLQTRTMHSYDQLVWNAWMPSIRGAIQQWTCRQPEPLIELIEYWMPLLPNWIMENILDLLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWAEVFAKGDMEAFLVKNIIPKLQITLSEFVINPHQQHLDQWNCVYEWKELIPVHIMAGLLDKFFFPKWLQVLALWLNHSPNYDQVITWYLNWKKMLSEKLLAEPVIKEHLKKALDMMNRAVNGSQNHQPGALEQVLYLISLERTQPTMSQMAPIAQPRMERLAEAVRTASQIPQGFKDFVQKKCEERGILFMPIPNRYKEAKQVYKVGNVQAYIDSNVLFVCHNGTNWMPTHLNALLDMSEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00898736;
- 90% Identity
- iTF_01421552;
- 80% Identity
- -