Basic Information

Insect: Temnothorax longispinosus
Gene Symbol: pita
Assembly: GCA_004794745.1
Location: QBLH01003046.1:64617-68128[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2.1e-05 0.0016 18.3 0.4 2 23 310 331 309 331 0.97

2 11 3e-05 0.0024 17.8 1.2 1 23 338 361 338 361 0.98

3 11 0.00055 0.043 13.8 2.3 1 23 403 425 403 425 0.98

4 11 4.1e-07 3.2e-05 23.7 1.5 2 23 479 500 478 500 0.97

5 11 9.6e-05 0.0075 16.2 0.5 1 20 505 524 505 525 0.94

6 11 7.5e-05 0.0058 16.6 0.2 1 23 527 549 527 549 0.97

7 11 7.2e-07 5.6e-05 22.9 1.7 1 23 559 581 559 581 0.96

8 11 3.5e-06 0.00027 20.8 1.8 1 23 587 609 587 609 0.99

9 11 8.2e-06 0.00064 19.6 0.2 1 23 615 637 615 637 0.98

10 11 3.3e-05 0.0026 17.7 4.5 1 23 643 665 643 665 0.98

11 11 0.00094 0.073 13.1 0.5 1 21 671 691 671 692 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2.1e-05	0.0016	18.3	0.4	2	23	310	331	309	331	0.97
2	11	3e-05	0.0024	17.8	1.2	1	23	338	361	338	361	0.98
3	11	0.00055	0.043	13.8	2.3	1	23	403	425	403	425	0.98
4	11	4.1e-07	3.2e-05	23.7	1.5	2	23	479	500	478	500	0.97
5	11	9.6e-05	0.0075	16.2	0.5	1	20	505	524	505	525	0.94
6	11	7.5e-05	0.0058	16.6	0.2	1	23	527	549	527	549	0.97
7	11	7.2e-07	5.6e-05	22.9	1.7	1	23	559	581	559	581	0.96
8	11	3.5e-06	0.00027	20.8	1.8	1	23	587	609	587	609	0.99
9	11	8.2e-06	0.00064	19.6	0.2	1	23	615	637	615	637	0.98
10	11	3.3e-05	0.0026	17.7	4.5	1	23	643	665	643	665	0.98
11	11	0.00094	0.073	13.1	0.5	1	21	671	691	671	692	0.94

Sequence Information

Coding Sequence: ATGGCAGTCCCGAGCGATGACGCGATGGTGAATAGCACGGTACGCGCGGAACGGCTCGTGGGCAACGAGTGCCGTATCTGCCTCAAGCCCTGCACGGAGGTGTGCCAGCTCTTTCGCGACGATGGCGGAATACCGGAGAAACTGATGGCCATTGCCGCCGTGCAGGTGGAGGAGGGGGACGGTCTGCCAGCTTACATCTGCCTGTCCTGCAATCATCTGCTCGACGTGTCCTACGACTTCAGATGCCAGATTCAGAATTCCGACATCAGGCTACGTCAGATCCTCAAGTCGCAGGTTCAACCTATGTTGCACGAGAAACATACGAAAGACATGAAGACCATGATGAAAGATATCACGGACGCCGTATCCGACGTGATGTCTTACAAGAAAGATGATCATGTCATAGAGCAGGACATTTACTCGTCTCACGATATCGTTACGTTCGACAGTACTGCCGTTCAGTCCGATTCGGCGATTAATGATGAATCTCACATGAGTCACAAGTTCATGCAAAAGACGGATGAAATTGTCGAACCGAGTGAAAAAGATTCGTCATACGATACATTTAAAGAGAACGTAGACAGTGCTGAAATGATGGAAATAGCTTTGTGTCACGAGGCAAACGTGGACGATGCGGCTGCCGATCACTCGGATCGATTGTCCAGTTCGACGACGGAAGACAGATGCATCAAGCAGGAGCAGTTGCTGCTACCTGAAGACAACGAGACGTCGGGGAGTTTAACGGACGAGAATCGGGAAGATTCATTGAAGATTGAAGTTAAGAATGACGTATTATTGGAGGACTTCAACGACCACGAAGTTTCGAGGGAGATCGCGGTATTGAGAACGGACAATCGGGATACGAGGGGCGTCGCTAACTGCAGCGACGACGAGGAGAAGCCACTCATAAGCAGAACGACCAGGCAGAAGTGCGCGTATTGCATCAAGTCGTTCGCGACGAAGGTCGCGTTGCAGCGACACATGAACGTGCACAAGCACACGAAGCTGCGCTACGTGTGCGTCGTGTGCGACAAGCAGTTCTCCAACATCGACAAATTGAAGGGCCACATGCTCACGTGTCACGAGGGTCAGACGACGGACGGTAAAGCGTCGCAGGATGACAGGAGGACGAGCAAAGTTACGGCGAAAGTCACCAGAAGCGGCAACCTGACGGACAGCGTGCGGGAGGAGAAGAAAAACTTCAAGTTCACGTGTAAAGTCTGCTCGAAGCAATTCATATATCAGAAGTCCTTTGTGTCTCACGCCAAAAGCCATGCCGAATACGATACGGAAGTGGACGACGTGCTTGATCAGTTCACGAGTAAGACGATGGACGAGCAGAAGGATAGGATGCTGACGTTCAAGGAAAACGAAtccgaggaggaggaggaagaggaggacgacgacgacagcgaCTTGCCGATCGAAAGTCTACAGTGTACTCAGTGCGGCAAGCTTTTCGCCACGAAGAGGAACCTGAAGAGGCACATCTCGACGCACAGCGGCTTGAAGTTCAATTGTTCGACGTGCGGCAAAGGATTTTCGAGGCTCGACAAGCTGAAGGATCACGAACAGCCACACAAGTGCGCGCTCTGTCCAAAGGCGTTCGCGCAGGCTCAATCCCTGGCAAACCACGTAGAGAGGCATAAACGGGTGAAGGATACGCAAAAGCGGTTTCTCTGCGAAAAGTGTAGCAAGTGCTTTGCTCAGAGTGGCTCGCTGGTGGCGCATATGCGCACACACACCGGCATCAAGCCGTAcgtatgcaacacgtgcagtCGCGCCTTTACCAAGAGCACGTACCTGCAGCTGCACCTGAGAACTCACAGCGGTGAGAAACCGTATATCTGTCAGTACTGTAGCAGGGCGTTCGCTCGGGCCAACACTCTGGCGCGGCACATCACCATGCACACCGGTGAGGCCAAATACCATTGCAACATCTGCACCAAGTCCTTCCGGCGACTGACCTCGCTGAACGAGCACACTTACACGCACACCGGCCAACGACCGTACGCGTGCAAACTCTGCACGAAGAGGTACAACAACGCCGGCTCGTTATATGCTCACACGAAGAAGTGCAAGGCGCAGCAGTTGTCCAGCCCGACCACGACCACATACGCGGTGTCCACGGCGGACAATGCGCCGCAGCAGAACGACACGACCATGCCCCAACTGCTGATTTATTCCCAGAGGAAGCTGGTGGAAGAGGCGACTATTGGTCAAGTCGTATCCACGCCGCAATACATGGTAACAAATGTGCATAATCAAAAAACTGTGCCCGCGACGGTGCCCGCCAACGTGATTCAGCCCTTCACCGTAGAAGACCCGaatgtatataattcaaaGCAGTTTAAGAACTCGTATTACGCTATTTATCCAAATAACTTATAA
Protein Sequence: MAVPSDDAMVNSTVRAERLVGNECRICLKPCTEVCQLFRDDGGIPEKLMAIAAVQVEEGDGLPAYICLSCNHLLDVSYDFRCQIQNSDIRLRQILKSQVQPMLHEKHTKDMKTMMKDITDAVSDVMSYKKDDHVIEQDIYSSHDIVTFDSTAVQSDSAINDESHMSHKFMQKTDEIVEPSEKDSSYDTFKENVDSAEMMEIALCHEANVDDAAADHSDRLSSSTTEDRCIKQEQLLLPEDNETSGSLTDENREDSLKIEVKNDVLLEDFNDHEVSREIAVLRTDNRDTRGVANCSDDEEKPLISRTTRQKCAYCIKSFATKVALQRHMNVHKHTKLRYVCVVCDKQFSNIDKLKGHMLTCHEGQTTDGKASQDDRRTSKVTAKVTRSGNLTDSVREEKKNFKFTCKVCSKQFIYQKSFVSHAKSHAEYDTEVDDVLDQFTSKTMDEQKDRMLTFKENESEEEEEEEDDDDSDLPIESLQCTQCGKLFATKRNLKRHISTHSGLKFNCSTCGKGFSRLDKLKDHEQPHKCALCPKAFAQAQSLANHVERHKRVKDTQKRFLCEKCSKCFAQSGSLVAHMRTHTGIKPYVCNTCSRAFTKSTYLQLHLRTHSGEKPYICQYCSRAFARANTLARHITMHTGEAKYHCNICTKSFRRLTSLNEHTYTHTGQRPYACKLCTKRYNNAGSLYAHTKKCKAQQLSSPTTTTYAVSTADNAPQQNDTTMPQLLIYSQRKLVEEATIGQVVSTPQYMVTNVHNQKTVPATVPANVIQPFTVEDPNVYNSKQFKNSYYAIYPNNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01476429;
90% Identity: iTF_01405956; iTF_01409395; iTF_01408476; iTF_01407585;
80% Identity: -