Basic Information

Insect: Tachinus rufipes
Gene Symbol: -
Assembly: GCA_963932245.1
Location: OZ010744.1:83652966-83656555[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.5e-05 0.0093 18.7 0.7 1 23 139 161 139 161 0.95

2 15 0.00051 0.13 15.0 0.3 3 23 169 189 168 189 0.99

3 15 0.00014 0.036 16.9 0.1 1 23 295 317 295 317 0.98

4 15 0.014 3.7 10.5 0.4 1 23 323 346 323 346 0.98

5 15 3.6e-05 0.0096 18.6 3.8 1 23 370 392 370 392 0.97

6 15 0.0032 0.84 12.5 0.0 1 23 405 427 405 427 0.95

7 15 0.18 47 7.0 0.1 1 23 433 456 433 456 0.94

8 15 0.041 11 9.1 5.6 2 23 464 485 464 485 0.94

9 15 4.9e-05 0.013 18.2 4.5 1 23 491 513 491 513 0.98

10 15 0.01 2.7 10.9 1.3 3 23 520 540 519 540 0.97

11 15 1.1e-05 0.003 20.2 0.4 1 23 548 570 548 570 0.98

12 15 0.0049 1.3 11.9 0.2 3 23 578 598 576 598 0.97

13 15 0.00016 0.041 16.7 0.3 1 23 604 626 604 627 0.95

14 15 0.047 12 8.9 1.5 1 23 641 663 641 663 0.96

15 15 0.0013 0.36 13.7 0.1 1 20 954 973 954 976 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.5e-05	0.0093	18.7	0.7	1	23	139	161	139	161	0.95
2	15	0.00051	0.13	15.0	0.3	3	23	169	189	168	189	0.99
3	15	0.00014	0.036	16.9	0.1	1	23	295	317	295	317	0.98
4	15	0.014	3.7	10.5	0.4	1	23	323	346	323	346	0.98
5	15	3.6e-05	0.0096	18.6	3.8	1	23	370	392	370	392	0.97
6	15	0.0032	0.84	12.5	0.0	1	23	405	427	405	427	0.95
7	15	0.18	47	7.0	0.1	1	23	433	456	433	456	0.94
8	15	0.041	11	9.1	5.6	2	23	464	485	464	485	0.94
9	15	4.9e-05	0.013	18.2	4.5	1	23	491	513	491	513	0.98
10	15	0.01	2.7	10.9	1.3	3	23	520	540	519	540	0.97
11	15	1.1e-05	0.003	20.2	0.4	1	23	548	570	548	570	0.98
12	15	0.0049	1.3	11.9	0.2	3	23	578	598	576	598	0.97
13	15	0.00016	0.041	16.7	0.3	1	23	604	626	604	627	0.95
14	15	0.047	12	8.9	1.5	1	23	641	663	641	663	0.96
15	15	0.0013	0.36	13.7	0.1	1	20	954	973	954	976	0.94

Sequence Information

Coding Sequence: ATGGAGGATTCATTTTCACTGGCATGGGATGATGGGGGAACTGTAGTTCAAACAGAAGAAGTGATTTGTGGAATGGATAATGACAATCTAATAGAAGCAAATGGTAACCAATTTTCTGAAGTATGTGAAGAAGTTGTCGTGCAAGAAACAGTGGCTGAGGAAACTGTTGCTACCCAAGATGGTGTAATGTATCTTACTGAAGACAATGTTCTAGTCATGCAACAACCTACAGATCCAACCTACATGGACTGTAATGTTACTGAAGAAGTAGTTGCTGCCGACCAATGGGGTGAAACTTGTAATGAACTTGTAGTCGGTTCTGAAGAACATGTTGGTGATACTGAAGATCAACCAGCTGACGATATAATAATACCACTACCAACTGATCAAGATCAATATTCTGCCACGAGACCATATCCCTGTGATTTCTGTAGTCggagatttagaaaaaaagcaaacttaatGAATCACATGGTTGCTCATCAAACTGATAAACCACATGGTTGTAATTTGTGTGGTGTAAGATATGTTCGGAAGTTTGATTTAATGAACCATTTAAAAATTCACGCTTATGTGCCTGAGACTGAAAATCTTGAAGAAGAGATACCTGAAGATCCCGAGTATGATACCGATCGAACAATTAGGAAACGACCAAAGCCTAGCCCatttaaaaagaagaagaataaaacaaaaattaaagaggaATTTATGGATGATAATAAAGCAGCCAGTAGTTCACGTTCATACGATTATGTTGATGAGGATGTACGGCTTATGGAAGCAATGGAGAACACAACCAGATCTGATTATAATGAATATTTAACAAGAGAGAATAATTCAATGGTGGAACCAaggtttccaATAACTGACCCTAGAAAACCATTTGTTTGTCAACATTGTGGAGTAGGATTTGCTAGAGAAAAAGCTCTTGCATCGCATGCGAGAATTCATGCAGGTGATAGTCCATTTGAATGTCGTCGATGTGGTGAAATGTTTTGGGATGCAAATTCAATGCGTgaacacattaaaacaaaacacaatggTGTGGAGGACGACTTCCTAGATGAGGATGATGAATTCTCGGATGAAGACAGTAAATTTGGTGAATTCTTTTGTTCAACATGTGGAGTTACTTTTCATcgacaagatttgttaaaacgTCATCAAAGATTACACATAAAAGAGGAATATGTTAATGAAAATGAGTTTGGTCatgtttgtaatgtttgtgGAGAGTCCTTCCCAGAAGCGTTAGATCTTTTAGCTCATGCTGAAGTACATGCACGGAGTTCTGAATATAGATGTATGATTTGTGGAGAATTATGTCCAGATGATCAATCATTAGCTGCTCATGTACAAGCTAAGCATGGAAAAGTGCTTCCACCAAACACATGCATGCATTGTGGACGAACTTGCAAAGATAAACGTACTCTATTGAATCATTCCATGGAGCATACTAAGGAAAAAACATTTCCTTGCTCTAAATGCCAGAAGACTTTCCATAATAAAGCACGGTTGAAGCGACATATGTTGTCACATCGTAATAAAGCAGTTGCTTGTGATGTATGTGGAGAACATTTTCCAGATGGTAGGTCATTAATGAATCATAGGCATAGTCACAGTAGTGTATCAGGTCGACAATTTCCATGCCGTGAGTGTGGGAAAACATTTGGCTCTAGGAGTTCTCAACAAATTCATATTAGAATTCATACTGGTGAAAGACCTTACGGTTGCCGGTTTTGTTGGAAGGCATTTGCTGATGGTGGTACATTACGTAAACATGAACGTATCCATACTGGTGAGAAACCATATGCATGCGCTGTTTGTCCACGTGCTTTTAACCAGAGGGTTGTTTTAAGGGAGCACATTCGTTCACATCATTCAGGTCCTGATCCTAATTATACACATAGTATGACTCCATATTGTTGTGCTGTTTGTTCTGATATGTTTTCTACATCACAAGACTTAATTGTGCATTTGATTCACCATTGTGATTTGAATACAGCAATGCGTAGGCAACCACAGGTAGGACCTAGAAAATATAAACGTAGAAGGAAACTAAAGCCTCATGAATTGGAACTAATTTCAACTAATGTAGATTTTGTTGATGAAGAGGAAGATAATGATGAGGACTACAGTGAATCTGACGAAGATGAAACTAAAAAGaggaaaaagaaacaaagaaagaattcagcaaaatcAACCGATGATGGTTACGCTGAAATGTACAATAGTTTCTCTTCAGCAATCGAAAATATCAATACAATTATAACTACCAAACCTACGAAGgcaaaaaagaaaccaaaagaACAATTATTACCATCACGACCGAAAATGATTCACACACAGAAAACCAAAGTTGCTGTTGAATCTGCTGATGGTGCTAAGGTTCGGCATAAGACTAAAACATTAGTGACTCGAACACAACCAACAGAATTAAAATCAGCTACCGGGGATCGAATAAGACCACGCACAAAAAATGTCAGTTATCATGTACTCCATCCGGATAAATTACCATTAGCTACATTCCCGGATGATGACACTGAACAAGCTGTCAATAGTCTGTTAGAAAACGAAATGCCTGAAACCAATGGAACAATTGAAGAAACATCGccgaaaaataaaaaaggtaatAATAGTTTAGCACCGGGTAGGCATATAATAGGACCTggacaaattgtaaaatttgttaaaagtggTATGATtgtttcaaagaaaaaaattaaatgtgaaGAGTTAGACATACAAGAAACTGTTATTGAAGAAATGGTTGATAATACAATACATATTAAAGAAGAGGTGCCTGATAATCCGCTGAATGAATTAGCTGAACTTTCCATGCAGCAcgctcaaaatttatttaagtgtgAAATGTGTAGTGCTACGTTTTCTGATCGTGCACAATTATTGGTACACGTTCCCATCCATATTTGA
Protein Sequence: MEDSFSLAWDDGGTVVQTEEVICGMDNDNLIEANGNQFSEVCEEVVVQETVAEETVATQDGVMYLTEDNVLVMQQPTDPTYMDCNVTEEVVAADQWGETCNELVVGSEEHVGDTEDQPADDIIIPLPTDQDQYSATRPYPCDFCSRRFRKKANLMNHMVAHQTDKPHGCNLCGVRYVRKFDLMNHLKIHAYVPETENLEEEIPEDPEYDTDRTIRKRPKPSPFKKKKNKTKIKEEFMDDNKAASSSRSYDYVDEDVRLMEAMENTTRSDYNEYLTRENNSMVEPRFPITDPRKPFVCQHCGVGFAREKALASHARIHAGDSPFECRRCGEMFWDANSMREHIKTKHNGVEDDFLDEDDEFSDEDSKFGEFFCSTCGVTFHRQDLLKRHQRLHIKEEYVNENEFGHVCNVCGESFPEALDLLAHAEVHARSSEYRCMICGELCPDDQSLAAHVQAKHGKVLPPNTCMHCGRTCKDKRTLLNHSMEHTKEKTFPCSKCQKTFHNKARLKRHMLSHRNKAVACDVCGEHFPDGRSLMNHRHSHSSVSGRQFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPNYTHSMTPYCCAVCSDMFSTSQDLIVHLIHHCDLNTAMRRQPQVGPRKYKRRRKLKPHELELISTNVDFVDEEEDNDEDYSESDEDETKKRKKKQRKNSAKSTDDGYAEMYNSFSSAIENINTIITTKPTKAKKKPKEQLLPSRPKMIHTQKTKVAVESADGAKVRHKTKTLVTRTQPTELKSATGDRIRPRTKNVSYHVLHPDKLPLATFPDDDTEQAVNSLLENEMPETNGTIEETSPKNKKGNNSLAPGRHIIGPGQIVKFVKSGMIVSKKKIKCEELDIQETVIEEMVDNTIHIKEEVPDNPLNELAELSMQHAQNLFKCEMCSATFSDRAQLLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01186440; iTF_00369711; iTF_01126639; iTF_01185426; iTF_01196978; iTF_00430043; iTF_01096828;
90% Identity: -
80% Identity: -