Basic Information

Insect: Othius punctulatus
Gene Symbol: -
Assembly: GCA_951805005.1
Location: OX638141.1:28404938-28408952[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.9e-05 0.0063 18.7 0.7 1 23 138 160 138 160 0.95

2 15 0.00056 0.092 15.0 0.3 3 23 168 188 167 188 0.99

3 15 0.00026 0.043 16.1 0.2 1 23 295 317 295 317 0.98

4 15 0.082 13 8.2 0.3 1 23 323 346 323 346 0.97

5 15 3e-05 0.0049 19.0 4.3 1 23 371 393 371 393 0.97

6 15 0.0052 0.84 12.0 0.0 1 23 406 428 406 428 0.95

7 15 0.028 4.6 9.7 0.1 1 23 434 457 434 457 0.94

8 15 0.054 8.8 8.8 4.2 3 23 466 486 465 486 0.93

9 15 1.9e-05 0.003 19.7 3.9 1 23 492 514 492 514 0.98

10 15 0.0069 1.1 11.6 1.3 2 23 520 541 519 541 0.96

11 15 1.3e-05 0.002 20.2 0.4 1 23 549 571 549 571 0.98

12 15 0.0055 0.89 11.9 0.2 3 23 579 599 577 599 0.97

13 15 0.00017 0.028 16.7 0.3 1 23 605 627 605 628 0.95

14 15 0.052 8.4 8.9 1.5 1 23 642 664 642 664 0.96

15 15 6.5e-05 0.011 18.0 0.1 1 23 955 977 955 977 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.9e-05	0.0063	18.7	0.7	1	23	138	160	138	160	0.95
2	15	0.00056	0.092	15.0	0.3	3	23	168	188	167	188	0.99
3	15	0.00026	0.043	16.1	0.2	1	23	295	317	295	317	0.98
4	15	0.082	13	8.2	0.3	1	23	323	346	323	346	0.97
5	15	3e-05	0.0049	19.0	4.3	1	23	371	393	371	393	0.97
6	15	0.0052	0.84	12.0	0.0	1	23	406	428	406	428	0.95
7	15	0.028	4.6	9.7	0.1	1	23	434	457	434	457	0.94
8	15	0.054	8.8	8.8	4.2	3	23	466	486	465	486	0.93
9	15	1.9e-05	0.003	19.7	3.9	1	23	492	514	492	514	0.98
10	15	0.0069	1.1	11.6	1.3	2	23	520	541	519	541	0.96
11	15	1.3e-05	0.002	20.2	0.4	1	23	549	571	549	571	0.98
12	15	0.0055	0.89	11.9	0.2	3	23	579	599	577	599	0.97
13	15	0.00017	0.028	16.7	0.3	1	23	605	627	605	628	0.95
14	15	0.052	8.4	8.9	1.5	1	23	642	664	642	664	0.96
15	15	6.5e-05	0.011	18.0	0.1	1	23	955	977	955	977	0.98

Sequence Information

Coding Sequence: ATGGAAGACTCTTTCACGTTGACATGGGACGACGGCACGACCGTCGTCCAGTCAGAGGAGGTGATATGCGGCATCGACAACGAGAACATGCTCGACAACAGTACGAACCAGTTCAGCGAGGTCTGCGAGGAGGTCGTCGTGGGCGACTCGGACCACAACGGGGAGGCGGTCCAGGGCGACGGCGTCATGTACCTGACAGAGGACCATGTCCTGGTCATGCAGCAGCCCACTGAGACGGCTTTCATGGACTGCGAGGTCACCGAGGAGGTCGTGGCCGACCAATGGGGTGAGGCCTGCAACGAGCTGATTGTGGGGTCCGAGGAGCATGTCGGGGACATCGATGAGCACGCCTCCGACGACATCATCATCCCGCTGCCCACCGACCAGGACCAGTACTCAGCGACCCGCCCATACCCCTGCGACTTCTGCAGCCGGCGGTTCAGGAAAAAGGCCAACCTGATGAACCACATGGTGGCGCACCAGTCCGATAAGCCGCACGGGTGCAACCTGTGCGGCGTTCGCTACGTCAGAAAATTCGATCTGATGAATCACTTAAAAATTCACGCGTACGTCCCGGAAACTGACAACATCGAGGAGGaaattaagcaggaagatgtGGACTTCGATAAAGTCAGGAAGAGGCCTAAACCTAGTTTTATCAAGAACAAAAAGAAGATCAGCAAGGCAAAAGTCAAAGACGAGTTTACCGGGAATGGAAAGGGACCTTCCAGTTCTCGTTCGTACGATTATGTGGATGAAGATGTCAGATTAATGGAAGCCATGGAAAATAATCCAAGAGCAGAATTTCCCGATTACATTACAACTAGAGAGGCTCCACAAATTGGTGAACCTAGataCCCGATAACCGATCCGAGAAAGCCGTTTGTTTGCCAACATTGTGGGGTTGGTTTCGCTCGTGAGAAGGCCCTGGCATCCCACTCCCGGATCCACGCGGGCGACAGCCCGTTCGAGTGCAGACGGTGCGGAGAAATGTTCTGGGATGCAAACCTGATGCGTGAGCATGTAAAAACGAAGCATGGCGGGGTCGAGGATGACTTCATCGATGACGACGACGAGTTCTCAGACGAGGACAACAACAAGTATGGCGAGTTTTTCTGCTCGACCTGCGGCATGACGTTCCACAGGCAGGACTTGCTGAAGCGCCACCAGCGTCTGCACATCAAAGACGAGTACGTGAACGAAAATGAGTTTGGTCACATCTGCAATGTATGCGGTGAGTCTTTCGCTGAGGCTCTGGACCTCCTGGCGCACGCCGAGGTCCACGCGAGAGGCTCAGAGTACCGGTGCATGGTGTGCGGGGAGATTTGCTCCGATGATCAGACTCTGGCCGCCCACGTTCAAGCCAGGCATGGCAAAGCTCTCCCGCCGAATTCTTGCATGCACTGCGGCCGGACGTGCAAGGATAAACGTGCCTTGCTCAGTCATTCGCTCGAGCACACCAAGGAAAAATCGTTTCCTTGTACCAAGTGCCAGAAGACTTTCTACAACAAGCAGCGATTGAAAAGACACATGTTGTCCCATCGTAACAAAGTTGTATCCTGCGACGTGTGCGGAGAACACTTTCCCGATGGTCGATCGTTAATGAACCACCGTCATAGTCATAGCAGTGTATCAGGAAGGCAGTTTCCATGCCGTGAGTGTGGTAAAACGTTTGGTTCACGGAGTTCGCAACAAATCCATATTAGAATACATACTGGGGAAAGACCGTACGGGTGCCGATTTTGTTGGAAAGCCTTTGCCGACGGAGGCACCCTTCGGAAGCATGAAAGAATACATACCGGTGAAAAACCGTACGCGTGTGCTGTGTGTCCACGGGCTTTTAATCAACGTGTTGTGCTCAGGGAGCACATAAGATCCCACCACTCAGGACCGGATCCAAATTACAGCCACAGTGTAACACCATATTGCTGCGCTGTTTGCTCTGATATGTTTTCGACATCGCAAGATCTAATAGTACACTTAATTCATCATTGCGATATGAACACCGCAATGCGAAGGCAACCACAGATTGGCCCTAGGAAGTACAAACGTAGACGTAAGTTGAAGCCACATGAATTGGAATTGATATCTAATAACTTGGAATTtgaagaggaagaagaaaacGATGATGATTATATGGACTCGGATGAGGAAAATgataagaaaagaaaaaagaagcCGCATAAAAATGCAACTGCTAAAGCACCTGACGATTCTTACACTGAGATGTATAACAGTTTTTCATCCGCTATAGAGAATATAAATACTATAATGAACACCAAGCCAATAAAAGCTAAAAAGAAAGTCAAGGAGCAAATTGTGCCTTCGAGGCCGAAAATGATTCACACCCAAAAAACCAAGGTGGCAGTTGAAACGGCCGATGGTGGCAAGGTGCGGCATAAAACAAAAACCTTGGTTACTCGAACGCAGCCGACCGAATTAAAATCCGTTACAGGAGATCGCATCAGGCCTCGTACGAAGAATGTGAGTTACCACATTTTGAACTCTGATAAACTACCTCTGGCCACTTTCCCGGAAGACGATGCCAAACAAGCGGTTAATAATTTGTTGATGAGCGAGGCATCCGAAGCTAATGGAGTATCTGAGGAGGATTCACCGAAAACCAAGAAAAGTAACAACAGCCTGGCACCAGGCAGGCATATAATTGGGCCGGGGCAAATCGTTAAGTTTGTGAAGAGTGGAATGATAGTatctaagaaaaaaatcaaagacGAAGAGATAGACATACAGGAACACGTTATTGAAGAAATGATTGATAACACGGTAATAATTAAGCAGGAGGCCGCAGATAATCCTCTCAACGAATTTGCCGAACTGTCTATGCAGCATGCACAGAATATTTTCAAGTGCGAAATGTGCAGTGCGACTTTTTCGGATCGCGCGCAGCTGCTTGTCCACGTTAACATCCACATCTGA
Protein Sequence: MEDSFTLTWDDGTTVVQSEEVICGIDNENMLDNSTNQFSEVCEEVVVGDSDHNGEAVQGDGVMYLTEDHVLVMQQPTETAFMDCEVTEEVVADQWGEACNELIVGSEEHVGDIDEHASDDIIIPLPTDQDQYSATRPYPCDFCSRRFRKKANLMNHMVAHQSDKPHGCNLCGVRYVRKFDLMNHLKIHAYVPETDNIEEEIKQEDVDFDKVRKRPKPSFIKNKKKISKAKVKDEFTGNGKGPSSSRSYDYVDEDVRLMEAMENNPRAEFPDYITTREAPQIGEPRYPITDPRKPFVCQHCGVGFAREKALASHSRIHAGDSPFECRRCGEMFWDANLMREHVKTKHGGVEDDFIDDDDEFSDEDNNKYGEFFCSTCGMTFHRQDLLKRHQRLHIKDEYVNENEFGHICNVCGESFAEALDLLAHAEVHARGSEYRCMVCGEICSDDQTLAAHVQARHGKALPPNSCMHCGRTCKDKRALLSHSLEHTKEKSFPCTKCQKTFYNKQRLKRHMLSHRNKVVSCDVCGEHFPDGRSLMNHRHSHSSVSGRQFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPNYSHSVTPYCCAVCSDMFSTSQDLIVHLIHHCDMNTAMRRQPQIGPRKYKRRRKLKPHELELISNNLEFEEEEENDDDYMDSDEENDKKRKKKPHKNATAKAPDDSYTEMYNSFSSAIENINTIMNTKPIKAKKKVKEQIVPSRPKMIHTQKTKVAVETADGGKVRHKTKTLVTRTQPTELKSVTGDRIRPRTKNVSYHILNSDKLPLATFPEDDAKQAVNNLLMSEASEANGVSEEDSPKTKKSNNSLAPGRHIIGPGQIVKFVKSGMIVSKKKIKDEEIDIQEHVIEEMIDNTVIIKQEAADNPLNEFAELSMQHAQNIFKCEMCSATFSDRAQLLVHVNIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01400609;
90% Identity: -
80% Identity: -