Basic Information

Insect: Phosphuga atrata
Gene Symbol: -
Assembly: GCA_944567605.1
Location: CALYMX010004190.1:3168-6141[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 7.3e-05 0.023 17.9 1.0 1 23 138 160 138 160 0.97

2 15 0.00077 0.25 14.7 0.2 3 23 168 188 167 188 0.99

3 15 0.00015 0.048 16.9 0.1 1 23 291 313 291 313 0.98

4 15 0.027 8.7 9.8 0.3 1 23 319 342 319 342 0.98

5 15 7.2e-06 0.0023 21.1 2.2 1 23 367 389 367 389 0.97

6 15 0.0011 0.36 14.2 0.0 1 23 402 424 402 424 0.95

7 15 0.31 98 6.5 0.2 1 23 430 453 430 453 0.93

8 15 0.00041 0.13 15.6 2.1 2 23 461 482 461 482 0.96

9 15 0.00068 0.22 14.9 6.2 1 23 488 510 488 510 0.97

10 15 0.033 11 9.6 0.5 2 23 516 537 515 537 0.96

11 15 1.3e-05 0.0043 20.2 0.4 1 23 545 567 545 567 0.98

12 15 0.0058 1.8 11.9 0.2 3 23 575 595 573 595 0.97

13 15 0.00018 0.058 16.7 0.3 1 23 601 623 601 624 0.95

14 15 0.029 9.1 9.8 2.3 1 23 638 660 638 660 0.96

15 15 0.00065 0.21 14.9 0.2 1 20 948 967 948 970 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	7.3e-05	0.023	17.9	1.0	1	23	138	160	138	160	0.97
2	15	0.00077	0.25	14.7	0.2	3	23	168	188	167	188	0.99
3	15	0.00015	0.048	16.9	0.1	1	23	291	313	291	313	0.98
4	15	0.027	8.7	9.8	0.3	1	23	319	342	319	342	0.98
5	15	7.2e-06	0.0023	21.1	2.2	1	23	367	389	367	389	0.97
6	15	0.0011	0.36	14.2	0.0	1	23	402	424	402	424	0.95
7	15	0.31	98	6.5	0.2	1	23	430	453	430	453	0.93
8	15	0.00041	0.13	15.6	2.1	2	23	461	482	461	482	0.96
9	15	0.00068	0.22	14.9	6.2	1	23	488	510	488	510	0.97
10	15	0.033	11	9.6	0.5	2	23	516	537	515	537	0.96
11	15	1.3e-05	0.0043	20.2	0.4	1	23	545	567	545	567	0.98
12	15	0.0058	1.8	11.9	0.2	3	23	575	595	573	595	0.97
13	15	0.00018	0.058	16.7	0.3	1	23	601	623	601	624	0.95
14	15	0.029	9.1	9.8	2.3	1	23	638	660	638	660	0.96
15	15	0.00065	0.21	14.9	0.2	1	20	948	967	948	970	0.93

Sequence Information

Coding Sequence: ATGGAGGATTCATATACATTGACTTGGGAGGATGGGTCCGAGGTGGTCCAAACAGAAGAGGTGATCTGCGGCATAGACAATGAAAACATGATAACAGCAGACAGTTCTGAATTCGAGGACGTGTGCGAGGAGGTCGTTGTCCAGACTGGTGAGACCTCTGTGGGGAGCGACCAGGGTGATGGGGTCATGTATTTAACCGAGGAGCAGATCCTTGTCATGCAGCAACCGACGGACACGGCGTTTTTGGACTGCCAGGTCGCCGAAGAGGTCGTCACCGAGGAATGGGCGGATGCGTGCGATGAACTGGTCCTCGGGTCGGAGGAACACGTCGGAGATACTGAGGATCAAGCTGGGGATGACGTTATGATACCGCTGCCAACTGATCAGGATCAGTATTCTGCTGCGAGACCGTACCCTTGCGACTTCTGCAGTCGGAGGTTCAGGAAGAAGGACACGTTGATGAGCCACATGATTGCCCATCAAACGGATAAACCTCATGGTTGTAATCTCTGTGGCGTCCGGTACGTCAGGAAAATGGATTTGATGAATCATTTGAAGGTGCATGCATACGCCCCAGATACGGAAAACTTGGAGGAAGAATTAGGGGAGGATCCAGATTATGACCACACTATCAGGAAGAGGACGAAACCTAATTTTGTTAAGAAAAAGAAGAATAAAACTAGAATCAAGGAAGAGTTCTCAAGTAATGGGAAAGGTGCTTCTAGTTCGAGGTCCTATGACTATGTTGATGAGGACGTCAGACTGATGGAAGCCATGCAAAATAAACCTGCAACAGAATATAATGAATTTTTACCAAGGGATAATCTTCCTGTTGAACCTAGGTTTCCAATTATAGATGCTAGAAAACCGTTTGTTTGCCAGCATTGTGGTGTTGGATTTGCAAGAGAGAAGGCCTTGGCGTCTCATGCGAGAGTCCACGCCGGGGATAGTCCGTTCGAATGTAGGCGATGTGGCGAGATGTTTTGGGACGCGAATTTGATGCGAGATCACATCAAAACGAAGCATAACGGGGTAGAAGACGATTTTCTGGATGAGGACGATGATGAATTCTCGGAAGAAGAAAGTAAATTCGGGGAGTTTTTCTGCTCCACTTGTGGAATGAGTTTCCAACGGCAAGATTTATTGAAGAGGCATCAAAGGTTGCATATTAAAGAGGAGTATGTGAACGAGAACGAGTTTGGGCATGTCTGCAATGTTTGCGGAGAATCTTTCACCGAGGCTTTGGATTTGCTGGCGCATGCTGAAGTACACGCGAGGACTTCAGAGTTTAGATGCATGTTATGTGGAGAAGGGTGTCCGGATGGTCAATCTTTAGCCGCGCACGTAAATTTTAAGCATGGGAAGTCTTTGCCAAATAATACTTGTCCTCAGTGTGGAAGAACGTGTAGGGATAAACGCACGTTAATGAATCACGTTTTGGAACATTCGAAAGAGAAATCATTTAACTGCTTCAAATGCCAGAAGACGTTCCATAATAAAGCACGTTTAAAGCGTCACATGTTATCGCATAGAAACAAAGCTGTCACATGCGACGTTTGTTCGGAAGAATTCCCTGATGGTAGGTCGTTGATGAACCATAGACACAGCCATAGCAGCGTTTCCGGTCGACAGTTCCcttgccgagaatgcggaaaaactttcggttcacgaagctcgcaacaaatccatattagaatacacacgggcgaaagaccttacggttgcagattttgctggaaagcttttgccgacggtggcactttaaggaaacacgagcgaattcataccggcgagaaaccttacgcttgtgctgtttgtccacgagcttttaatcaaagggttgttttaagagaacatatcagatctcatCATTCCGGCCCAGACCCAAATTACAGTCACAGCATGACACCTTACTGCTGCACAGTTTGCTCGGATATGTTTTCAACTTCACAAGATTTGATAGTGCATTTGATACACCATTGCGATTTGAACACTGCAATGCGAAGGCAACCCCAAATTGGACCAAGAAAGTACAAAAGGAGGCGCAAGTTGAAACCTCATGAATTAGAAATGCTTCCCACTGCAAATGAAGAAGATGAGGAAAATGAAGAAGACTTTACGGATTCTGATGAAGAGAATGATAAGAAGAAGAAGACAAGGAAACCTAGAAAAAATTCTGTTAAGAATGATGAGTATGCTGAGATGTACAATAGTTTTTCTTCTGCTATAGAGAACATTAATACTATTATGAATACTAAGACTAGTAAAGCGAAGAAAAAGCAGAAGGAAGTAGTAGTGCCTTCTAGACCGAAGATGATTCACACGCAGAAAACCAAAGTAGCTGTCGAGAGCGCAGAGGGTGGAAAAATTCGTCACAAAACAAAAACTTTGGTAACTCGAACGCAACCCACTGAACTGAAGTCCTCGACGGGAGATCGAATTCGTCCGCGTACCAAAAATGTAAGCTATCACTCCCTAGGTCCTGATAAGTTACCATTAGCCACTTTCCCAGATGACGATGAGACCGAACAAGCCCTAAACAGCCTCCTAGAAAATGAAAACCCAGACTTGAACGGAGTTTCAGAAGAATCTTCTCCAAAGAATAAGAAAGGTAATAATAGTTTAGCGCCTGGTCGACATATAATCGGGCCAGGGCAAATAGTTAAGTTTGTTAAGAGTGGAATGATTGTTTCAAAGAAGAAAATTAAAACGGAAGAACTTGAAGTGCAAGAGACCGTTATTGAAGAAATGGTTGATAACACAGTTTTTATTAAACAAGAGAAAGATGATAATCCCCTAAACGAGTTGGCTGAGTTGTCCATGCAATATGCTCAAAACATTTTTAAATGTGAGATGTGTAGTGCCAGTTTCTCAGACCGTTCTCAGTTACTTCTTCACGTACCAATCCATATTTGA
Protein Sequence: MEDSYTLTWEDGSEVVQTEEVICGIDNENMITADSSEFEDVCEEVVVQTGETSVGSDQGDGVMYLTEEQILVMQQPTDTAFLDCQVAEEVVTEEWADACDELVLGSEEHVGDTEDQAGDDVMIPLPTDQDQYSAARPYPCDFCSRRFRKKDTLMSHMIAHQTDKPHGCNLCGVRYVRKMDLMNHLKVHAYAPDTENLEEELGEDPDYDHTIRKRTKPNFVKKKKNKTRIKEEFSSNGKGASSSRSYDYVDEDVRLMEAMQNKPATEYNEFLPRDNLPVEPRFPIIDARKPFVCQHCGVGFAREKALASHARVHAGDSPFECRRCGEMFWDANLMRDHIKTKHNGVEDDFLDEDDDEFSEEESKFGEFFCSTCGMSFQRQDLLKRHQRLHIKEEYVNENEFGHVCNVCGESFTEALDLLAHAEVHARTSEFRCMLCGEGCPDGQSLAAHVNFKHGKSLPNNTCPQCGRTCRDKRTLMNHVLEHSKEKSFNCFKCQKTFHNKARLKRHMLSHRNKAVTCDVCSEEFPDGRSLMNHRHSHSSVSGRQFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPNYSHSMTPYCCTVCSDMFSTSQDLIVHLIHHCDLNTAMRRQPQIGPRKYKRRRKLKPHELEMLPTANEEDEENEEDFTDSDEENDKKKKTRKPRKNSVKNDEYAEMYNSFSSAIENINTIMNTKTSKAKKKQKEVVVPSRPKMIHTQKTKVAVESAEGGKIRHKTKTLVTRTQPTELKSSTGDRIRPRTKNVSYHSLGPDKLPLATFPDDDETEQALNSLLENENPDLNGVSEESSPKNKKGNNSLAPGRHIIGPGQIVKFVKSGMIVSKKKIKTEELEVQETVIEEMVDNTVFIKQEKDDNPLNELAELSMQYAQNIFKCEMCSASFSDRSQLLLHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01400609;
90% Identity: -
80% Identity: -