Truf040296.1
Basic Information
- Insect
- Tachinus rufipes
- Gene Symbol
- bab2
- Assembly
- GCA_963932245.1
- Location
- OZ010745.1:72570915-72573816[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-15 2.1e-11 45.7 0.1 3 45 358 400 356 400 0.92 2 2 5.1 3.1e+04 -2.9 0.1 29 40 491 502 491 503 0.85
Sequence Information
- Coding Sequence
- ATGGGTAGCAACGCCCAACAATATTGCTTACGATGGAACAACCACCGATCAAACCTGCTCACCGTATTTGATGAGCTCTTACAAAACGAGGCCTTTACAGATGTAACCTTAGTGTGCGAGGGCGGAAGCCCGATCAAGTGCCATAGGATGGTGTTGGCAGCATGCTCACCATATTTTCAGAACCTCTTTACTGATCTCCCCTGCAAGCACCCCGTAGTTGTACTAAAAGATGTGAAATACATAGaaatcaaagcaattttagAATACATGTACAGAGGTGAGGTCAATGTAGCTCAAGACCAATTAGCCGCATTATTAAAAGTTGCGGAGGCATTAAAAGTTAAAGGATTAGTTGAGGAGAATAGAGGCGGTGAAAAGGGCGCACCGGAATCTGAACCTTCTCCAACAGGTGATAGCCCTAGTAGTACCAATAACCAATCTACTGTGCATAGCAGCAGTAATAATTCGCCGCCGCATTCAACAAACGGGGTACAATACAAACATCCTTATAGTCTTTATGGAAAAGCTCCTTCAATGGACAGGGGATCAAGAATGAATATACCCATGTGGACTGTACCCGGGTTACCTTTACCGCACCATCCTACTCAAGTGCCACAACAGAATCATCCCCATGCTGCAGCAACTGCTGCTGCGGCTATGCTCAGTAGCTGCTATGAAGCAGGAAATTCCGATATGAACCCGCTCAAAAGAAAGAAGCTGTCTAGTTTATTAATGAATAGGGATACACCAATTCTGAGGACAGTTTTAGGACAAGCCGATTCATCACAACCTGTTAGTTTAGTATGCCATTCCGAAAATATCCCCGACAATGTAAATTCCAATGGCCTTGAAGAACGTCACGAAAAACATATTAAAAATGAACCGTCCGAAGACGCACAGTCCCCATATACCGAACTTTCCATGTTGGACGATgatgaaaaaccaaaattaggAGTGCCTTCTACTTCACCGCATGCATATTCAGGAGATATGCGAGGACTTTCTGGCATAGCCACTTACGTGCCTAGCAACCAAAAACCTGAATGGAAAAGATACAAACAATACACGCGAAACGACATAATGTCTGCGATAGAAGCTGTGCGAAACGGTATGTCAGCTTTACAAGCCGCTCGAAAATACGGAGTGCCTTCAAGAACATTATATGATAAAGTAAAGAAACTAGGTATTACGACGAGTCGGCCCTTCAAGCGTGGTAGTAATGGAAGTAGTGCCTGTTTCCCGTACGGAATCAGCGGTACGAGTTCACCATATATGGATTCCGAAGAGCATAGCATGAATAATAACAGCGCCATGTTAGATGCCAGTAGTATTCTTCAGCATGCTTTAGATAGCAGAGGAGGAGATGAAAGGGAAGCTTTAGCTGCCATGGCGGCGGCGGCTGCTGCACATGCCGCTATGTCTGGCCATAGTACAAGTCCTAACAACAATACCCACGCGAGGAGTCCCAGCCCTAGTCCGACTTTGCTAAAATACATGCGATTACACAATCTAACACCATCTCCGGCTCCCGGTAGCGAGCACAACCATAGCGAAACTAACGGTAGCTCGGAACGGGACCGCGAAGAAGAAGACGATCAAGTTGAGGATTTATCGGTTAGCAGGAAGCAAGAGTCGCGCGTGATAATGCCCCCGATGAATATGTCATCAATAATCAAAAAAGAGGAAATGCTCAAAGAGACACTGAGAGAAGAGATGCGGCGAGAGGTAAGCGTCGAAAATGCggagtaa
- Protein Sequence
- MGSNAQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLVCEGGSPIKCHRMVLAACSPYFQNLFTDLPCKHPVVVLKDVKYIEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRGGEKGAPESEPSPTGDSPSSTNNQSTVHSSSNNSPPHSTNGVQYKHPYSLYGKAPSMDRGSRMNIPMWTVPGLPLPHHPTQVPQQNHPHAAATAAAAMLSSCYEAGNSDMNPLKRKKLSSLLMNRDTPILRTVLGQADSSQPVSLVCHSENIPDNVNSNGLEERHEKHIKNEPSEDAQSPYTELSMLDDDEKPKLGVPSTSPHAYSGDMRGLSGIATYVPSNQKPEWKRYKQYTRNDIMSAIEAVRNGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSSACFPYGISGTSSPYMDSEEHSMNNNSAMLDASSILQHALDSRGGDEREALAAMAAAAAAHAAMSGHSTSPNNNTHARSPSPSPTLLKYMRLHNLTPSPAPGSEHNHSETNGSSERDREEEDDQVEDLSVSRKQESRVIMPPMNMSSIIKKEEMLKETLREEMRREVSVENAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01400502; iTF_01184394; iTF_01096751; iTF_01185246; iTF_01096543; iTF_00920756; iTF_00920590; iTF_01126548; iTF_01126276; iTF_01196854; iTF_01196610; iTF_01186108; iTF_01186326;
- 90% Identity
- iTF_01400502;
- 80% Identity
- iTF_01400502;