Opun036453.1
Basic Information
- Insect
- Othius punctulatus
- Gene Symbol
- bab1
- Assembly
- GCA_951805005.1
- Location
- OX638142.1:82169873-82180025[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-11 1.4e-08 36.1 0.1 3 45 375 417 373 417 0.92
Sequence Information
- Coding Sequence
- ATGGGCAGCAACTCGCAGCAGTTCTGCCTCCGCTGGAACAACCACCGGTCGAACCTGCTGACCGTCTTCGACGAGCTGCTGCAGAACGAGGCGTTCACGGACGTGACGCTGGTGTGCGAGGGCGGCAGCCCCATCAAGTGCCATAGGATGGTGCTGGCGGCGTGCTCGCCGTACTTCCAGAACCTCTTCACCGACCTGCCCTGCAAGCACCCGGTGGTCGTCCTCAAGGACGTCAAGTACGTCGAGATCAAGGCGATCCTCGAGTACATGTACAGGGGCGAGGTGAACGTGGCCCAGGACCAGCTCGCCGCCCTGCTCAAGGTGGCCGAGGCGCTCAAGGTGAAGGGCCTGGTGGAGGAGAAccgcggcggcggcggcggccaTAAGCGGCCGCCCCCCGGCGAGTCGGAGGGCGGCTCGCCGGGAGGCGGCGGCGAGCCGGGCGCGAGCCCGTCTAGCACGAACAACAACAATAACACGCAACCGCCCGTGCACAGTAGCAGCAACAACTCGCCGCCCCATTCTACCAACGGCATGCTCTACAAGAATCCGTACAGCCTCTACGGCAAGGCGCCCTCCGTGGACCGCGGCTCCAGGATGAACATCCCCATGTGGACGATGCCAGGACTGCCGCTCCCACAGCACCCCTCCCAGGTGCCCCAGCAGAGCCACCCCCATGCCGCCGCCACGGCAGCAGCCGCCATGCTCAGCAGCTGCTACGAGGCCGGCAACTCCGACATGAACCCCCTCAAGCGGAAGAAACTGTCCAGCCGGCTCATGAACAGGGACACCCCCATCCTGAGGACCGTCCTCGGACAGGCGGACTCCTCGCAACCCGTCAGCCTAGTGTGCCATTCCAATAACCACGACAATATCAACTCCAACTCCAACGGTGTGgaggagcaaattgaaaacaaaCATATAAAAAACGAGCCTTCCGAAGACGCACAGAGCCCGTACACAGACCTGTCCATGATGGACGACGAGGAGAAGTCGAAGCTGGGGATCCCGTCTTCGTCGCCGCACGCGTACTCCGGTGATATGCGCGGCCTCTCCGGCATAGCCACCTACGTCCCCAGCACGCAGAAGCCCGAGTGGAAGAGGTACAAGCAGTACACGAGGAACGACATCATGTCCGCGATCGAGGCGGTGCGGAACGGCAAGTCGGCGCTGCAGGCGGCCAGGCAGTACGGGGTGCCCTCGAGGACGCTGTACGACAAGGTGAAGAAGCTGGGGATCACGACGAGCAGGCCGTTCAAGCGGGGCTCGAACGGCAGCAGCGCGTGCTTCCCCTACGGCATCAGCGGCACCAGCTCCCCGTACGGCCACCTGGAGCCCGAGGAGCACAGCATGAACAACAACTCGGCCCTCCTGGAGGCGAGCAGCATCCTGCAGCACGCGCTGGACAGCCGCGGCGGCGACGAGCGGGAGGCGCTCGCGGCGatggcggcggcggcggcggcccACGCGGCCATCTCCGGCCACAGCACCAGCCCCAACAACAGCAGCCACCACGCGCGCAGCCCCAGCCCCAGCCCTACCCTCCTGAAGTACATGCGGCTGAACAGCCTGACGCCATCACCAGCGCCTTGCAGCGAGCACAACCACAGCGAGACGAACGGCAGCTCGGAGCGCGACAGGGAGGAGGACGAGGACCACGTGGAGGACCTGTCCGTCAGCAGGAAGCAGGAGTCGCGCGTGATCATGCCTCCGATGAGCATGAGCTCCATCATCAAGAAGGAGGAGATGCTCAAGGAGACGCTGCGGGAGGAGATGCGGCGCGAGGTAAGCGTGGAGAACGCCGAGTAG
- Protein Sequence
- MGSNSQQFCLRWNNHRSNLLTVFDELLQNEAFTDVTLVCEGGSPIKCHRMVLAACSPYFQNLFTDLPCKHPVVVLKDVKYVEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRGGGGGHKRPPPGESEGGSPGGGGEPGASPSSTNNNNNTQPPVHSSSNNSPPHSTNGMLYKNPYSLYGKAPSVDRGSRMNIPMWTMPGLPLPQHPSQVPQQSHPHAAATAAAAMLSSCYEAGNSDMNPLKRKKLSSRLMNRDTPILRTVLGQADSSQPVSLVCHSNNHDNINSNSNGVEEQIENKHIKNEPSEDAQSPYTDLSMMDDEEKSKLGIPSSSPHAYSGDMRGLSGIATYVPSTQKPEWKRYKQYTRNDIMSAIEAVRNGKSALQAARQYGVPSRTLYDKVKKLGITTSRPFKRGSNGSSACFPYGISGTSSPYGHLEPEEHSMNNNSALLEASSILQHALDSRGGDEREALAAMAAAAAAHAAISGHSTSPNNSSHHARSPSPSPTLLKYMRLNSLTPSPAPCSEHNHSETNGSSERDREEDEDHVEDLSVSRKQESRVIMPPMSMSSIIKKEEMLKETLREEMRREVSVENAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01400283;
- 90% Identity
- iTF_01126548;
- 80% Identity
- iTF_01126548;