Basic Information

Gene Symbol
bab1
Assembly
GCA_963969525.1
Location
OZ018390.1:74141480-74143477[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-14 6.2e-11 44.3 0.1 3 45 370 412 368 412 0.92

Sequence Information

Coding Sequence
ATGGGTAGTAACGCCCAGCAGTACTGCCTGCGATGGAACAACCACCGATCGAACCTGCTGACCGTCTTCGACGAACTCTTGCAGAACGAGGCCTTCACGGACGTGACGCTCGTGTGCGAGGGCGGCAGCCCCATCAAGTGCCATAGGATGGTCTTGGCAGCGTGCTCGCCATATTTCCAGAACCTCTTCACCGATCTCCCCTGTAAACACCCTGTCGTCGTCCTGAAAGACGTCAAATTTGTAGAAATCAAAGCCATATTAGAGTACATGTACAGGGGTGAGGTGAATGTCGCCCAGGACCAATTAGCCGCGCTGCTGAAGGTAGCGGAAGCGCTAAAAGTCAAAGGCCTGGTGGAGGAAAATAGGACGGGGCCGAAGCGCAGCCCCAACGAATCGCAGACCTCGCCTACCGCCGAGCCCGGCGTCAGTCCCTCCAGCacgaacaataataataacaacaaccAGTCGACGGTGCACAGCAGCAGCAACAACTCACCACCCCATTCCACCAACGGTATGCTATACAAGAGTCCGTACAGCCTGTATGGCAAGGCGCCCTCGATAGACCGCGGATCGAGGATGAACATTCCGATGTGGACGATGCCGGGACTTCCCCTGCCCCAGCATCCCTCACAAGTGCCCCAGCAGAACCACCCTCACGCCGCAGCGACGGCAGCGGCCGCCATGCTCAGCAGTTGCTACGAAGCCGGCAACTCCGACATGAACCCCCTAAAGAGGAAAAAACTGTCCAGCCTGCTCATGAACAGGGACACCCCCATTCTGAGGACGGTGTTGGGACAGGCCGACTCCTCCCAACCCGTTAGCTTAGTTTGCCATTCCGATAACAATAATCAGAGCGAAAACGTTAATTCGAACGGTGTCGATGAGCGAAATACTGAAAAgCACATAAAAAATGAACCTTCCGAAGACGCCCAATCCCCCTACACGGACCTGTCGATGATGGATGATGAAGAGAAGTCGAAATTGGGAGTGCCATCATCGTCGCCGCACGCGTATTCCGGTGAGATGCGCGGAATGTCCGGAATAGCCACCTACGTCCCCAGCACACAGAAGCCCGAATGGAAACGCTACAAGCAGTACACGAGGAATGATATAATGTCCGCGATCGACGCCGTCCGCAATGGCATGTCCGCCCTCCAAGCCGCCCGTAAGTACGGTGTACCCTCCAGGACGTTGTATGATAAAGTGAAGAAGTTGGGCATCACGACAAGCAGGCCGTTCAAGCGTGGTTCCAACGGCAGCAGCGCGTGCTTCCCTTATGGAATCTCCGGCACGAGTTCTCCTTACGGACACCTGGAGAACGATGAGCACAGCATGAACAACAACAGTGCGTTACTAGAAGCGAACAGTATCCTTCAGCACGCACTGGACAGTCGAGGTGGTGATGAGAGGGAAGCGTTGGCGGCGATGGCGGCCGCGGCGGCAGCACACGCAGCGATTTCAGGTCACAGCACCAGCCCCAACAACAACAGCCACGCGAGGAGTCCAAGCCCCAGCCCCACACTACTCAAATATATGAGGTTGAATAGTATGACGCCATCTCCAGCGCCTGGCAGCGAACACAACCACAGCGAGACCAACGGCAGCTCGGAACGGGATCGAGAGGAAGAAGACGACCAAGTGGAAGACCTATCAGTAAGCAGGAAACAAGAGTCTCGTGTGATAATGCCACCAATGAGCATGTCCTCAATCATCAAAAAAGAGGAGATGCTCAAGGAAACACTGCGGGAGGAGATGCGACGCGAGGTAAGCGTCGAAAACGTTGAGTAA
Protein Sequence
MGSNAQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLVCEGGSPIKCHRMVLAACSPYFQNLFTDLPCKHPVVVLKDVKFVEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRTGPKRSPNESQTSPTAEPGVSPSSTNNNNNNNQSTVHSSSNNSPPHSTNGMLYKSPYSLYGKAPSIDRGSRMNIPMWTMPGLPLPQHPSQVPQQNHPHAAATAAAAMLSSCYEAGNSDMNPLKRKKLSSLLMNRDTPILRTVLGQADSSQPVSLVCHSDNNNQSENVNSNGVDERNTEKHIKNEPSEDAQSPYTDLSMMDDEEKSKLGVPSSSPHAYSGEMRGMSGIATYVPSTQKPEWKRYKQYTRNDIMSAIDAVRNGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSSACFPYGISGTSSPYGHLENDEHSMNNNSALLEANSILQHALDSRGGDEREALAAMAAAAAAHAAISGHSTSPNNNSHARSPSPSPTLLKYMRLNSMTPSPAPGSEHNHSETNGSSERDREEEDDQVEDLSVSRKQESRVIMPPMSMSSIIKKEEMLKETLREEMRREVSVENVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01400283;
90% Identity
iTF_01184394;
80% Identity
iTF_01096751;