Basic Information

Insect: Tachina lurida
Gene Symbol: -
Assembly: GCA_944452685.1
Location: CALYBZ010000651.1:157589-162367[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 4.1 4e+02 2.7 0.5 2 20 441 459 440 461 0.92

2 17 0.0024 0.24 12.9 1.5 2 19 507 524 506 526 0.95

3 17 5.1 4.9e+02 2.4 0.4 2 23 568 590 567 590 0.93

4 17 0.2 20 6.8 0.5 3 23 598 618 596 618 0.94

5 17 5.2e-05 0.0051 18.1 2.4 1 23 625 648 625 648 0.96

6 17 0.0048 0.47 11.9 4.0 2 21 656 675 655 677 0.94

7 17 1.1 1.1e+02 4.5 0.0 1 20 686 705 686 707 0.93

8 17 0.35 34 6.1 0.6 1 20 727 746 727 747 0.95

9 17 0.037 3.6 9.1 5.4 1 23 756 778 756 778 0.96

10 17 0.38 37 6.0 0.1 1 23 794 819 794 819 0.97

11 17 0.015 1.5 10.4 1.1 2 23 832 854 831 854 0.94

12 17 0.0017 0.16 13.4 5.5 2 23 860 882 859 882 0.91

13 17 0.0033 0.32 12.4 4.6 3 23 887 908 886 908 0.96

14 17 0.34 33 6.1 4.9 1 23 914 937 914 937 0.94

15 17 0.00028 0.027 15.8 0.4 1 23 942 964 942 964 0.98

16 17 0.00049 0.047 15.1 3.3 1 23 970 992 970 992 0.98

17 17 0.12 12 7.5 0.8 5 23 1008 1027 998 1027 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	4.1	4e+02	2.7	0.5	2	20	441	459	440	461	0.92
2	17	0.0024	0.24	12.9	1.5	2	19	507	524	506	526	0.95
3	17	5.1	4.9e+02	2.4	0.4	2	23	568	590	567	590	0.93
4	17	0.2	20	6.8	0.5	3	23	598	618	596	618	0.94
5	17	5.2e-05	0.0051	18.1	2.4	1	23	625	648	625	648	0.96
6	17	0.0048	0.47	11.9	4.0	2	21	656	675	655	677	0.94
7	17	1.1	1.1e+02	4.5	0.0	1	20	686	705	686	707	0.93
8	17	0.35	34	6.1	0.6	1	20	727	746	727	747	0.95
9	17	0.037	3.6	9.1	5.4	1	23	756	778	756	778	0.96
10	17	0.38	37	6.0	0.1	1	23	794	819	794	819	0.97
11	17	0.015	1.5	10.4	1.1	2	23	832	854	831	854	0.94
12	17	0.0017	0.16	13.4	5.5	2	23	860	882	859	882	0.91
13	17	0.0033	0.32	12.4	4.6	3	23	887	908	886	908	0.96
14	17	0.34	33	6.1	4.9	1	23	914	937	914	937	0.94
15	17	0.00028	0.027	15.8	0.4	1	23	942	964	942	964	0.98
16	17	0.00049	0.047	15.1	3.3	1	23	970	992	970	992	0.98
17	17	0.12	12	7.5	0.8	5	23	1008	1027	998	1027	0.87

Sequence Information

Coding Sequence: ATGGCTGTTAATGTTTCCACAATCGGCAGTGTCTGTTTATATTGTAAAACAAACTCGGAAGTAGATGATGGAAAAGATTTTCACGAAGTTTGCGATGAAGTGGGTCTCGAGCTGCAGTTACCCAACTTGGTGGAACAATTTTTTCATATTAAAGTGAAAAATGATGGGGCCAAACAGCTCTGCGATGATTGTGTTAATCATCTTATAGAGTTATATGATAGGGAAGAGCATGCCAAAGAAGAATGTAAAGCATCTGATGTGGAAAGGCCCGAAAAAACAAACAATAAAATAACAGAGGACCAGCATACAAGTCATGAAACTAACTTACAAAGGACTACTGCCATTGAAGATATAAACTTAAAAGAAGTTTGTCCTTTAACCCTCATCAATGACAACCAACAAAACGGTACCAGGAAAGTAGATGATCTTAAATATGGAAATGTGGAAAACTTAATTGTTAACGAAGGGCCGGTCCCTTTCGCTCTCGCTCATATTAAGGATGAGAATAGAGTCGCTGAAAACTTTATAGAGGAGGAGTTCATAATTTTACACGAAAATGAGGAGTCACAAAATTTCAACGAAATAACTCCAAACAGCATAATAGAAGTAGTAGACCTGTGCGTGGCTGGGTGTAATGATCACATCGAATTTCTTGAAGATGAGGGAAACCAGCCTTTGGAAATAGAAGACATAGATATGGATAACATAAACACTTTAAATAGCACTGAAAAATTAGAAATTATAAGGCAATGCCAAGTGAAAATTAGTGAGAACGATAATCTGTTCCCCGAAGTAGAAAATGAAGCTACGGAACTTGATTCAAATTGTAGTAACCAAAATGATTACATGAATGATATTGTGTATAAAGAAGAATTAGATGAAGCACAGGCAGCTGATAAAAATAAATTACAAATTGAAAATGGTCAGGAAATTGATGAAGACATTTGTATCGATACAACTGAAGATGTATATTATGAGGAAGACTCAGCAATCAATCATGACAAATATTGTTTAAATGATGAAATAACGATTGATGTGGAAAATAAAAATCAAACTTCTTCAGCAGAAGAATCTCAAAGTATTCAGGAGACGAATACAACAACATCCAGCAAGTGTCAAGAGACGGAAGCTCAAGTTTGTAAAGCAGAAATCAATGATGATGAAAAAGATGAAGTTTCAAACGATGATTTTTCGTTAGAAGAGGAGTATTTAATAGAAGAAATGAGTTGTCCTCAGCAATATGATGATGTTGATTTGAATGAATATTTAAGCAAGGTGTTGATAACACAATTTCAAGACTTACAAATGATCTGGGAGTCGGAATGCAAATTATGTCTTGCCAACTATAATGACTTTGATGAGCTATTAAGACATTCGTGTATCACTGAGTTTAAAGAGGAACAGCAATTCTGTTGTATTATGAAAAATTGTGATGACAGTATGCATGATTTACCATCATTTGCCAGACATTTGATACTAAAGCATTATAATAAATTAGAAAGTGTAGCAATTTACGGAAAATGTCCAGATTGCCAGAAAACATTTTCAAATATTATAGATTTTAATAAACATTCTTGCTGTAGAACTATAAAAAAAAAACCTGGGTCACGAAATTATTGCCAATACTGCGATATGGACTTTCAATCCTTAAAAAGATACGTGTTTCATATGCAATTTCATTTGACAAATCGGCGACCTAAAGTGTGCTTATTATGTGGTGATTTATTTGATAATTCCAATGATTTCTTTGAACACACTCAATATCAACATATGGCTGAAGGTTCTATGGCCTGCATGAAATGCGATCGTTTCTTTAAAGGCAAGGAAGTGTTTGATAGCCATATGGATTTGCATGAGGATTCAAAGTATAAATATAGTTGTACCTTTTGCCCTAAAAAATACACTAATAAATTCAGCTTAAATCAACACATGGATATTTATCACAACAACAAATCCAATATTTCTCGCTGCAGTGATTGTAATAGGGAATTTGTGACTAAAACATCTTATCGCAATCATATAAAATGTCATGTAACTGATGTTCAAATTGAATCTTTTATATGCTCAACATGTGGTATTATAAGTAATGATTTGGAATTTATGAAGAATCACATTGAACAAGATGAAGATGCTCCTTGCTTTTCATCTTCAATAGAAGAGAAAACTTTGGGTGTGAGCTATGCATGTGAAAACTGTTCTCTGGACTTTCATACAATTAAGGACCTTAAAAGTCACCGTTTATGTGAAAGTCATAAAGATGATTTATTCCATTGTGGTATTTGTCGACAAAGTTTCAAAACGCTGCGTCACATGCGAAACCATTCAATTAGTCACAAGGATTTCAAAGAACGCCAGAAATCATTTCCCATAACACGTCTTTATGTCTGCAATATAGGGGATTGTGAAGAGTTCTATCCAATATGGACCTCATTGTATTATCATAAAAAACGTCCACATAAAACTGAAAAAACTTCGGCAACTCTCGACAAGCTCAAATGTCAATTTTGTCAACATATGTTCGTTTCGAAAATGTCCTTGGCCGTTCACGTGGCGAGAAGTCATACTACTTCAAACGTTAAATGTTCTCACTGCAAACGAAATTTTAAATCTCAACAGCATTTGCAAGATCATATTGATTTTTTTCACACACCCGTAGATTGTGACATGTGCTTTAAAAAGTTCAAACATCGTCGCAATTTACAGTCGCACAATAAAATGGTGCATCTTAATATTAAGCGCTATTTTTGTAGCCATTGCGATAAAGGATATTTTCATAAAAGCGAAAGGGATATACATGAAAAAAAAGTCCATCCCGACATTTCTTATAAATGTGAAGTATGCAACTTTACAACTAATTATCCGGAATCTTTGGAAATTCATATGGACAAGCACAACAATCGGTTGAAATATCGGTGTTCAGTTTGCGGTAAAGCGTTCGGCCGCAAACAACTTTTAAAATGTCACTTAAAAAGGCATTTCAATCAAAAAGACTATTCCTGTGCTGAATATTTGAATGAAAACGGTTGTAATGCAACTTTTTTGACTAGTCATCTATTGAAAAAGCATATTCAAAGTAAACACCCAAACTCGAGTTATAACATTAACTTGCAAAGAGACAAACAACACAAAAAATCATTTAATCAATGTCCGGAAAGTGATCAAATAGAAAATATTTCATATGAAATATTAGACGATGACGACAGCAGTAGTAGTATGAGCGAAAAGAGTTGTAAATCATCTAAATTAATGCAATTTAATGATACAGAATTTGAGGGAGATTCCATTGTATTGGTTTTGGGAAATGAAATGGAAATTGATGAATAG
Protein Sequence: MAVNVSTIGSVCLYCKTNSEVDDGKDFHEVCDEVGLELQLPNLVEQFFHIKVKNDGAKQLCDDCVNHLIELYDREEHAKEECKASDVERPEKTNNKITEDQHTSHETNLQRTTAIEDINLKEVCPLTLINDNQQNGTRKVDDLKYGNVENLIVNEGPVPFALAHIKDENRVAENFIEEEFIILHENEESQNFNEITPNSIIEVVDLCVAGCNDHIEFLEDEGNQPLEIEDIDMDNINTLNSTEKLEIIRQCQVKISENDNLFPEVENEATELDSNCSNQNDYMNDIVYKEELDEAQAADKNKLQIENGQEIDEDICIDTTEDVYYEEDSAINHDKYCLNDEITIDVENKNQTSSAEESQSIQETNTTTSSKCQETEAQVCKAEINDDEKDEVSNDDFSLEEEYLIEEMSCPQQYDDVDLNEYLSKVLITQFQDLQMIWESECKLCLANYNDFDELLRHSCITEFKEEQQFCCIMKNCDDSMHDLPSFARHLILKHYNKLESVAIYGKCPDCQKTFSNIIDFNKHSCCRTIKKKPGSRNYCQYCDMDFQSLKRYVFHMQFHLTNRRPKVCLLCGDLFDNSNDFFEHTQYQHMAEGSMACMKCDRFFKGKEVFDSHMDLHEDSKYKYSCTFCPKKYTNKFSLNQHMDIYHNNKSNISRCSDCNREFVTKTSYRNHIKCHVTDVQIESFICSTCGIISNDLEFMKNHIEQDEDAPCFSSSIEEKTLGVSYACENCSLDFHTIKDLKSHRLCESHKDDLFHCGICRQSFKTLRHMRNHSISHKDFKERQKSFPITRLYVCNIGDCEEFYPIWTSLYYHKKRPHKTEKTSATLDKLKCQFCQHMFVSKMSLAVHVARSHTTSNVKCSHCKRNFKSQQHLQDHIDFFHTPVDCDMCFKKFKHRRNLQSHNKMVHLNIKRYFCSHCDKGYFHKSERDIHEKKVHPDISYKCEVCNFTTNYPESLEIHMDKHNNRLKYRCSVCGKAFGRKQLLKCHLKRHFNQKDYSCAEYLNENGCNATFLTSHLLKKHIQSKHPNSSYNINLQRDKQHKKSFNQCPESDQIENISYEILDDDDSSSSMSEKSCKSSKLMQFNDTEFEGDSIVLVLGNEMEIDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01397923; iTF_01074834; iTF_01398941;
90% Identity: -
80% Identity: -