Basic Information

Insect: Tachina grossa
Gene Symbol: -
Assembly: GCA_949987645.1
Location: OX465278.1:16323543-16328367[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2.1 2.8e+02 3.8 0.8 2 19 434 451 433 454 0.91

2 17 0.0029 0.37 12.9 1.5 2 19 500 517 499 519 0.95

3 17 3.5 4.4e+02 3.2 0.6 2 23 561 583 560 583 0.93

4 17 0.38 49 6.2 0.5 5 23 593 611 590 611 0.92

5 17 6.1e-05 0.0079 18.1 1.0 1 23 618 641 618 641 0.96

6 17 0.0057 0.73 11.9 4.0 2 21 649 668 648 670 0.94

7 17 0.78 1e+02 5.2 0.0 1 20 679 698 679 700 0.94

8 17 0.031 3.9 9.6 0.4 1 20 720 739 720 740 0.96

9 17 0.063 8.1 8.6 5.2 1 23 749 771 749 771 0.94

10 17 0.44 57 6.0 0.1 1 23 787 812 787 812 0.97

11 17 0.071 9.1 8.5 0.3 2 23 825 847 824 847 0.94

12 17 0.002 0.25 13.4 5.5 2 23 853 875 852 875 0.91

13 17 0.00077 0.098 14.7 3.4 2 23 879 901 878 901 0.95

14 17 0.53 68 5.7 5.1 1 23 907 930 907 930 0.94

15 17 0.00033 0.042 15.8 0.4 1 23 935 957 935 957 0.98

16 17 0.0015 0.19 13.8 4.8 1 23 963 985 963 985 0.98

17 17 0.65 84 5.4 0.9 5 23 1001 1020 991 1020 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2.1	2.8e+02	3.8	0.8	2	19	434	451	433	454	0.91
2	17	0.0029	0.37	12.9	1.5	2	19	500	517	499	519	0.95
3	17	3.5	4.4e+02	3.2	0.6	2	23	561	583	560	583	0.93
4	17	0.38	49	6.2	0.5	5	23	593	611	590	611	0.92
5	17	6.1e-05	0.0079	18.1	1.0	1	23	618	641	618	641	0.96
6	17	0.0057	0.73	11.9	4.0	2	21	649	668	648	670	0.94
7	17	0.78	1e+02	5.2	0.0	1	20	679	698	679	700	0.94
8	17	0.031	3.9	9.6	0.4	1	20	720	739	720	740	0.96
9	17	0.063	8.1	8.6	5.2	1	23	749	771	749	771	0.94
10	17	0.44	57	6.0	0.1	1	23	787	812	787	812	0.97
11	17	0.071	9.1	8.5	0.3	2	23	825	847	824	847	0.94
12	17	0.002	0.25	13.4	5.5	2	23	853	875	852	875	0.91
13	17	0.00077	0.098	14.7	3.4	2	23	879	901	878	901	0.95
14	17	0.53	68	5.7	5.1	1	23	907	930	907	930	0.94
15	17	0.00033	0.042	15.8	0.4	1	23	935	957	935	957	0.98
16	17	0.0015	0.19	13.8	4.8	1	23	963	985	963	985	0.98
17	17	0.65	84	5.4	0.9	5	23	1001	1020	991	1020	0.85

Sequence Information

Coding Sequence: ATGTCGGTTAATGTTTCCACAATCGGCAGTGTCTGTTTATATTGTAAAACAAACTCTGAAGTAGATGCTGGGAAAGATTTTCACGAAATTTACGATGAGGTGGGTCTCGAGCTGCAGTTACCCAACTTGGTGGAAACACTTTTTCATATTAAAGTGAAAAATGATGGGGCCAAACAGCTCTGCGATGATTGTGTTAATCATCTTATAGAGTTATATGATATGGCAGAACATGCCAAAGAAGCATCTGATGTGGAAAGACccgaaaaaacaaataataaaataacagaGGAGCAGTATACAAGTCATGAAACTAACTTACAAAGGACTACTGCCATTGAAGATAGaaacttaaaagttttaaccCCCATCAATAGCAACCAACAAAACGATACAAGGAAAGTAGATGATATTATATATGGAAATGtggaaaacttaattgataACGAAGGGCCGGTTCCTTTCGCTCTCGCTCATAGTCAGGATGAGAATAGTGTTGCTGAAAATTTTATAGAGGAGGAGTTCATAATTTTACACGAAAATGAAGACTCACAAAATGTCAACGAAATAATTCCAAACAGCATAATAGAAGTAATAGACCTGTGCGAGCCAGGGTGTAATGAGCACATCGAATTTCTTGAAGATGGGGGTAACCAATCTTTGGAAATAGAAGATATAGATAACACAAACACTTTAAATAGCACggaaaaattagaaattataAGGCAATGCCAAAAGAAGACTAGTGAGAATGATAATCCGTACCCTGAAGCAGAATATGAAGCTTCAGAACTTGATTCAAATTGTAGCAACCAAAATGATTACATAGATGATATtgtatataaagaaaaattagatGAAGTAGAGGCAGctgataaaaataattttcaaattggAAATGGTCAGGAAATTGATAAGGAAGACATTTGTATCGATTCAACTGAAGATATATATTATGAGGAAGATTCACCAAATAATGATGCAAAATATTGCTTAAATGATGAAATAACGAATAatgtggaaaataaaaataaacatacttCAGCAGAAGAACCTCAAAATATTCAGGAGACGAGTGCAACAACATCCAACAAGTGTCAAGAGGCGGAAGCTCAATTTTGTAAAGCAGAAATCAATGATGCTGAAAAAGATGAAGTTTTAAATGATGATTTTTCGTTAGAAGAGGAGTATTTAATAGAAGaaatgagTTGTCCTCAACAATATGATGATATTGATTTGAATGAGTATTTGAGCAAGGTGTTGATAACACAGTTTCATGACTTGCAAATAATCTGGGAGACGGAATGCAAATTATGTTTTGCCAACTATAATGACTTTGATGAGCTATTAAGGCATTCGTGTATCACTGAGTTCAAAAAGGAACAGCAATTCTGTTGTATAATGAAAAATTGTGATGAAAGTATGCATGATTTAGCATCATTTTGCAGGCATTTGATACTAAAGCATTATAACAAATTAGAAAGTGTCGCAATTTACGGAAAATGTCCAGATTgccaaaaaacattttcaaatattatagATTTTAACAAACATTCTTGCTGTCGAACTATAAAACGAAAACCTGGATCACCAAACTATTGCCAATATTGTGATATGGATTTTCAATCTTTAAAAAGATACGTGTTCCATATGCAATTTCATTTAACAAATCGGCGACCCAAAGTATGCTTGTTGTGTGgtgatttatttaataattccAATGATTTCTTTGAACACACTCAATATCAACATATGCCAGAAGGTTCTATGGCCTGCATAAAatGCGATCGTTTCTTTAAAGACAAGGAAGTGTTTGATAGCCATATGGATTTGCATGAGGATTCTAAGTATCAATATAGTTGTACATTTTGCCCtaaaaaatacactaataaAGTCGGCTTAAATCAACACATGGATATTTATCACAATAACAAATCCAATATTTCTCGATGTAGTGATTGTAATAGGGAATTTGTCACTAAAACATCTTATCGCAATCATATAAAATGTCATGCTACTGATGTTCAAGTTGAATCTTTTGTATGCTCAACATGTGGTATTATAAGTAATGATTTGGAATTTATGAAGAATCACATTGAAGAAGATGAAGATTCTCCTTGCTTTTCATCTTCAATAGAAGAGAAAACTTTGGGTGTGAGCTATACATGTGAAAACTGTTCTCTGgattttaatacaattaaagaTCTCAAAAGTCACCGTTTATGTGAAAGTCATAAAGATGATTTATTCCATTGTGGTATATGTCGACAAAGTTTCAAAACGCTGCGTCACATGCGAAACCATTCAATTAATCACAAGGATTTCAAAGAACGCCAAAAAGCATTTCCCATAACGCGTTTTTATGTCTGCAATATAGGGGATTGTGAAGAGTTCTATCCAATATGGACCTCATTATATTATCATAAAAAACGTCCACATAAAACTGCAGAAACTTCGGAAACTCCCAACAAGCTCAAATGTCAATTTTGTCAACAACTGTTCGTTTCGAAAATGTCCTTGGCGGTTCACGTGGCGAGAAGTCATAATAATTCAAACGTTAAATGTTCTCACTGTAaacgaaattttaaatctcAACAGCATTTGCAAGAtcatattgatttttttcacacaCCCATAGAATGTGACATGTGctataaaaagtttaaacatCGTCGCAATTTACAGTCGCACAATAAAATGGTGCATCTCAATATTAAGCGCTATTTTTGTAGCCATTGCGATAAAGGATATTTTCATAAAAGCGAAAAGGATATAcatgaaaaaaaaGTCCATCCCGACATTTCTTATAAATGTGAAGTGTGCAACTTTACAACTAATTATCCGGAATCTTTAGAAATTCATATGGACAAGCACAACAATCAGTTGAAATATCGGTGTTCAGTTTGCGGTAAAAAGTTCGGCCGCAAACAACTTTTAAAATGTCACTTAAAAAGGCATCTCAATCAAAAAGActATTCTTGTGCTGACTATTTGAAGGAAAGCGGTTGTAATGGAACTTTTTTGACTAGCCATCTATTGAAAAAGCATATTCAAAGTAAACATCCAAACTCAAGTTATACCATTAACTTGCAAAGAGACGAACcacataaaaaatcatttaatcaATGTCCGCCGGAATCTGatcaaatagaaaatatttcatatgaaatattAGGCGATAACGACAGCAGTAATAGTACGAGCGAAAAGAGTTGTAAATCATCTGAATTAATGCAATTTAATGATACAGAATTTGACGAAGATTCTATTGTATTGGTTTTGGAAAATGAAATGGAAATTGATGAATAG
Protein Sequence: MSVNVSTIGSVCLYCKTNSEVDAGKDFHEIYDEVGLELQLPNLVETLFHIKVKNDGAKQLCDDCVNHLIELYDMAEHAKEASDVERPEKTNNKITEEQYTSHETNLQRTTAIEDRNLKVLTPINSNQQNDTRKVDDIIYGNVENLIDNEGPVPFALAHSQDENSVAENFIEEEFIILHENEDSQNVNEIIPNSIIEVIDLCEPGCNEHIEFLEDGGNQSLEIEDIDNTNTLNSTEKLEIIRQCQKKTSENDNPYPEAEYEASELDSNCSNQNDYIDDIVYKEKLDEVEAADKNNFQIGNGQEIDKEDICIDSTEDIYYEEDSPNNDAKYCLNDEITNNVENKNKHTSAEEPQNIQETSATTSNKCQEAEAQFCKAEINDAEKDEVLNDDFSLEEEYLIEEMSCPQQYDDIDLNEYLSKVLITQFHDLQIIWETECKLCFANYNDFDELLRHSCITEFKKEQQFCCIMKNCDESMHDLASFCRHLILKHYNKLESVAIYGKCPDCQKTFSNIIDFNKHSCCRTIKRKPGSPNYCQYCDMDFQSLKRYVFHMQFHLTNRRPKVCLLCGDLFNNSNDFFEHTQYQHMPEGSMACIKCDRFFKDKEVFDSHMDLHEDSKYQYSCTFCPKKYTNKVGLNQHMDIYHNNKSNISRCSDCNREFVTKTSYRNHIKCHATDVQVESFVCSTCGIISNDLEFMKNHIEEDEDSPCFSSSIEEKTLGVSYTCENCSLDFNTIKDLKSHRLCESHKDDLFHCGICRQSFKTLRHMRNHSINHKDFKERQKAFPITRFYVCNIGDCEEFYPIWTSLYYHKKRPHKTAETSETPNKLKCQFCQQLFVSKMSLAVHVARSHNNSNVKCSHCKRNFKSQQHLQDHIDFFHTPIECDMCYKKFKHRRNLQSHNKMVHLNIKRYFCSHCDKGYFHKSEKDIHEKKVHPDISYKCEVCNFTTNYPESLEIHMDKHNNQLKYRCSVCGKKFGRKQLLKCHLKRHLNQKDYSCADYLKESGCNGTFLTSHLLKKHIQSKHPNSSYTINLQRDEPHKKSFNQCPPESDQIENISYEILGDNDSSNSTSEKSCKSSELMQFNDTEFDEDSIVLVLENEMEIDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01399832;
90% Identity: -
80% Identity: -