Basic Information

Insect: Tachina grossa
Gene Symbol: -
Assembly: GCA_949987645.1
Location: OX465277.1:149026084-149029496[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.2 25 7.1 2.3 1 23 54 77 54 77 0.91

2 19 0.041 5.2 9.2 3.5 1 23 83 106 83 106 0.98

3 19 0.00076 0.097 14.7 0.6 2 23 137 158 136 158 0.96

4 19 0.065 8.3 8.6 0.6 1 23 236 259 236 259 0.97

5 19 0.032 4.2 9.6 2.6 2 23 267 288 266 288 0.97

6 19 0.045 5.8 9.1 0.1 2 20 348 366 347 369 0.94

7 19 0.021 2.7 10.2 4.5 1 23 442 464 442 465 0.93

8 19 0.0059 0.76 11.9 0.3 1 22 472 493 472 493 0.96

9 19 0.0076 0.97 11.5 5.1 2 23 561 582 559 582 0.93

10 19 0.01 1.3 11.1 0.2 2 20 609 627 608 629 0.93

11 19 0.00028 0.035 16.1 5.5 1 23 680 703 680 703 0.98

12 19 0.009 1.1 11.3 2.3 1 23 740 763 740 763 0.97

13 19 0.94 1.2e+02 5.0 0.2 2 23 823 843 822 843 0.93

14 19 0.0029 0.38 12.8 2.5 1 23 849 872 849 872 0.98

15 19 4.6 5.9e+02 2.8 0.1 5 23 911 929 910 929 0.86

16 19 3.1e-06 0.00039 22.2 0.9 1 23 935 957 935 957 0.99

17 19 1.4e-05 0.0018 20.1 2.6 1 23 963 985 963 985 0.99

18 19 0.00011 0.014 17.3 2.1 1 23 991 1013 991 1013 0.96

19 19 0.021 2.7 10.2 1.6 1 22 1019 1040 1019 1043 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.2	25	7.1	2.3	1	23	54	77	54	77	0.91
2	19	0.041	5.2	9.2	3.5	1	23	83	106	83	106	0.98
3	19	0.00076	0.097	14.7	0.6	2	23	137	158	136	158	0.96
4	19	0.065	8.3	8.6	0.6	1	23	236	259	236	259	0.97
5	19	0.032	4.2	9.6	2.6	2	23	267	288	266	288	0.97
6	19	0.045	5.8	9.1	0.1	2	20	348	366	347	369	0.94
7	19	0.021	2.7	10.2	4.5	1	23	442	464	442	465	0.93
8	19	0.0059	0.76	11.9	0.3	1	22	472	493	472	493	0.96
9	19	0.0076	0.97	11.5	5.1	2	23	561	582	559	582	0.93
10	19	0.01	1.3	11.1	0.2	2	20	609	627	608	629	0.93
11	19	0.00028	0.035	16.1	5.5	1	23	680	703	680	703	0.98
12	19	0.009	1.1	11.3	2.3	1	23	740	763	740	763	0.97
13	19	0.94	1.2e+02	5.0	0.2	2	23	823	843	822	843	0.93
14	19	0.0029	0.38	12.8	2.5	1	23	849	872	849	872	0.98
15	19	4.6	5.9e+02	2.8	0.1	5	23	911	929	910	929	0.86
16	19	3.1e-06	0.00039	22.2	0.9	1	23	935	957	935	957	0.99
17	19	1.4e-05	0.0018	20.1	2.6	1	23	963	985	963	985	0.99
18	19	0.00011	0.014	17.3	2.1	1	23	991	1013	991	1013	0.96
19	19	0.021	2.7	10.2	1.6	1	22	1019	1040	1019	1043	0.90

Sequence Information

Coding Sequence: ATGCAAGATATGCACGAAAACAAAACTAATCCAAGAACTAAACCTGGGTCCTCATCCTCCAGTGATAGTGAACCAGACCTGCCCAATAGTCAGACATACGGAAAGAAATCTGAAGAACAATACTCCAAATACTTTCAAATCGAAAAGGTCAACGGTAATTTCGTATGTGGGGTGTGCAAACAATCATTTACGCTACAGAATTCTTGTCGCAGGCATATAGTTTTGAAGCACAGCCAAGCAAAATTGTTCCAATGCCGATTTTGCGACAGAAGTGTAAGATGTAAGGAATATTTAACTGCACATATTAAACGTCTACATCCCGGCGAGTCATTCGAATCCAATACACAACAATTAGCACGTTTGTTTGGAGAACGTTTGTATAGCAGACCATTGCTGCTACCACGGCTGGAATGCAAGCTGTGTGATACTATTTTTGTAACTAAGAAAAAACTACTTCAGCACTTAGATAGCCATAGTGAGGCCAGTACTCTTCACAGCTTAAAATTAAGCAGTGATGTTATTCAGCGTTGGTTTTCAAATATGAGCGATATACAAgacataaaaacaacaatatgcAAAGACATTCGGGAGAAAAATTTGTTCAAATATTACACAATgttaaatgatttttcctatGAAATATCTATTAGTGATACGGATGCAGAAGATTTGGAAGAAGAGACAGCAGCACCTgtcaacaaaaaatataaatgcgaATTGTGTGCAAAAgaatttttgtacaaatatcAAGTGTTTGCTCATTTGAGAGAGGATCATTGGAACGAAGACATTCCTTTGAAATGCAGCCATTGCAATCTGGAATTTATAtcaataaaaatgtatgaacaaCACAAACAAACTCACTGTCGAAATGAACATAAACTGTTCCTGTGCCCCAATTGCAATGGCAAGTTTGTCTGGctcgaaaatatgaaaaaacacaATTGTGTTACGAAAGTATTAGATATTGAAAAATCTCTCAATGATAAAATTAAGGAAAGGTATAATGAAGTAACGCGTTCGTCGCCAAAAACTGTCATTAGATGTGGTCTTTGTGAAATGATCTTCGAAAAGCTGCGGGACTTACGAAAACACATGCCTTTGCACGGCGACGGCAAAACTGGAGTTGACTTTGATGGTTGTATTTATGTAAATCAATTTGAAACTTCTTCCAGCAATCGCGAATTATTGGAACagaatattaaaaatgcatttacgAAACGTCAAATAAGTCAACTTTATCAAGCCATCGATAAGGACGGCAAAGAAATGGACATTTCAGATTCCGATACCGATGAAGACGATGCTGATGGGGAAAAAAGTTATTTGTGTGAACTTTGCTATGAAAAGTTTAAAAAGcgaaaacttctttttaatCATCAAAAGGAACATCACAAGGATGTTTCAATGCCTTTCACTTGCAAGGAATGTAAAATGCAATACGTTAGTATTGACTTGTTGCAACAACATATAAAGAGGGAATGTTGGAATGAACATCGACGAGCAGCTGAACAATGCGATTGTTGTAAAGAGCGTTTTATATGGCCGGAAAACATGTTGAGACATAGAGAAATACAGCGATACACAAGTATCAAAAATTTGCTATATGAAGACCTGTGTCGTACCCAGGCAAAGAAAACGATGGCTTCATCAAGCTCAAGTGACAATATTCAAATTTGCCATTGTTTCTTATGTCCTAAAATTTTCTCTAATATTAATCATTTAAATGATCATTTGATGCGTCATCGGTTAACACTATCCACCATCAAAACTGTTGCAAGCACAATACATTCTACATGGTGGCCAAATGGCAGAAAgataataaaatgcaaaatatgtaACCAAGAATTTTCTAGTATTACCAAATTAAATGAACACTACTctctaaaaaatctaaaaaacgtaTGTGGTGCAATGCAACATTCTCTGGCAAATTACTCGATTACTAATCAAATGGGGTTTGAATTGCATTTAGAACTGGATTCGGAAACAGAAACTGAATATATcgaaaatgaagaaaataaaaatttaatgtcatATAGTTGTTGCATGTGTAATAAATCGTTTAAGCGAAAATATGAAATATCTCAACATCAAAGATCCATGCACAGTTATGAATTATTGGAACTCAAATGTGAACGTTGTGTTTTTAGAACTGTATCAGAGAAAGTTTTAGATTATCATAGAATGAGTCAGTGTTTTgatgttgagaaaaaatatcaaTGCCATCAGTgtaatttcaaatttatgtggCAAGAGAACCTTGAAAATCATATTTCGATATTCCATAACTCAAACGATTTCTTCAAAACATTGGATGCAGCTAACACATCGTTTTTAAATGACGCCAGCAATATAAATGCTCAATGCCTTCAATTGAAAGAAAATTCACATAATGATGTATCATTAGCATTACATCAAAACTATTCAGATGCAGGGGAGTGCGTTCCATCTAAGGATACAATACAATGTCTAATTTGTGGAATTTACATTAACAAAAATGATTATTCAGAACATATTAGGAGGCACAAATGTGACAAATCTTACAAATGCACTTTTTGCGAAATGGTTTTCTTAACACGTGCCTCTTTAAGAAAGCATAAGCGCATGCGCCATAAACTTCATTCGAGTGAAAGTCCAAAAGGACAAATGAATTCATTATCGACGTTAGAAAAGAATTTGGACTCAACTGGTTCTACTCAACATCCACAAGGTACGAGAAAATTCAAATTATGTCCAATTTGTGGTGTCTATAGAAGAAATATTGAAATACATATTAGAAGCCACATGGAAGAGACGCCATTCAAGTGCGATCTATGTGATAAAATCTTTAGCACCGAAATTAACTTATATGTGCATCGGCGCACACACTCCAATAAACGTCCTTTTAAATGTACACTTTGTGAGAAAGCCTTTGTCCATGAATATAGATTAAAAGCTCACATGCGCTCTCACACTGGCGAGCGTCCATACGAGTGCACTGTTTGtcagaaaaaatttatcaatttgGCCAATTTGAAGCATCATTCACTTAATCATACTGGCAAGAAATCCTTTATATGTGAGATTTGCAATCGAGCCTTTAAATGTGCCCCATATCTCAAAAGACATCGTATCAGAAAGGGCCATCATTCAGAAAATAATTGA
Protein Sequence: MQDMHENKTNPRTKPGSSSSSDSEPDLPNSQTYGKKSEEQYSKYFQIEKVNGNFVCGVCKQSFTLQNSCRRHIVLKHSQAKLFQCRFCDRSVRCKEYLTAHIKRLHPGESFESNTQQLARLFGERLYSRPLLLPRLECKLCDTIFVTKKKLLQHLDSHSEASTLHSLKLSSDVIQRWFSNMSDIQDIKTTICKDIREKNLFKYYTMLNDFSYEISISDTDAEDLEEETAAPVNKKYKCELCAKEFLYKYQVFAHLREDHWNEDIPLKCSHCNLEFISIKMYEQHKQTHCRNEHKLFLCPNCNGKFVWLENMKKHNCVTKVLDIEKSLNDKIKERYNEVTRSSPKTVIRCGLCEMIFEKLRDLRKHMPLHGDGKTGVDFDGCIYVNQFETSSSNRELLEQNIKNAFTKRQISQLYQAIDKDGKEMDISDSDTDEDDADGEKSYLCELCYEKFKKRKLLFNHQKEHHKDVSMPFTCKECKMQYVSIDLLQQHIKRECWNEHRRAAEQCDCCKERFIWPENMLRHREIQRYTSIKNLLYEDLCRTQAKKTMASSSSSDNIQICHCFLCPKIFSNINHLNDHLMRHRLTLSTIKTVASTIHSTWWPNGRKIIKCKICNQEFSSITKLNEHYSLKNLKNVCGAMQHSLANYSITNQMGFELHLELDSETETEYIENEENKNLMSYSCCMCNKSFKRKYEISQHQRSMHSYELLELKCERCVFRTVSEKVLDYHRMSQCFDVEKKYQCHQCNFKFMWQENLENHISIFHNSNDFFKTLDAANTSFLNDASNINAQCLQLKENSHNDVSLALHQNYSDAGECVPSKDTIQCLICGIYINKNDYSEHIRRHKCDKSYKCTFCEMVFLTRASLRKHKRMRHKLHSSESPKGQMNSLSTLEKNLDSTGSTQHPQGTRKFKLCPICGVYRRNIEIHIRSHMEETPFKCDLCDKIFSTEINLYVHRRTHSNKRPFKCTLCEKAFVHEYRLKAHMRSHTGERPYECTVCQKKFINLANLKHHSLNHTGKKSFICEICNRAFKCAPYLKRHRIRKGHHSENN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01074838; iTF_01074779; iTF_01074750;
90% Identity: -
80% Identity: -