Basic Information

Insect: Nowickia ferox
Gene Symbol: -
Assembly: GCA_936446695.1
Location: CAKZFO010000027.1:4978158-4987054[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.4 2.3e+02 3.5 0.9 3 21 60 78 58 79 0.93

2 20 0.21 21 6.8 2.3 1 23 239 262 239 262 0.91

3 20 0.043 4.3 9.0 3.5 1 23 268 291 268 291 0.98

4 20 0.0008 0.079 14.5 0.6 2 23 322 343 321 343 0.96

5 20 0.0012 0.12 13.9 1.0 1 23 420 443 420 443 0.97

6 20 0.043 4.2 9.0 2.5 2 23 451 472 450 472 0.97

7 20 0.062 6.1 8.5 0.1 2 20 532 550 531 553 0.94

8 20 0.01 1 11.0 3.9 3 23 626 647 624 647 0.95

9 20 0.01 1 11.0 0.4 1 22 654 675 654 675 0.95

10 20 0.0021 0.21 13.1 7.3 2 23 743 764 742 764 0.96

11 20 0.01 1 11.0 0.1 2 20 791 809 790 811 0.93

12 20 0.0002 0.02 16.3 5.2 1 23 857 880 857 880 0.98

13 20 0.009 0.88 11.1 0.7 1 23 917 940 917 940 0.97

14 20 1.5 1.5e+02 4.2 0.2 2 23 1000 1020 999 1020 0.92

15 20 0.003 0.3 12.6 2.0 1 23 1026 1049 1026 1049 0.98

16 20 4.9 4.8e+02 2.5 0.1 5 23 1088 1106 1087 1106 0.86

17 20 3.3e-06 0.00032 22.0 0.9 1 23 1112 1134 1112 1134 0.99

18 20 1.5e-05 0.0015 19.9 2.6 1 23 1140 1162 1140 1162 0.99

19 20 0.00011 0.011 17.1 2.1 1 23 1168 1190 1168 1190 0.96

20 20 0.022 2.1 9.9 1.9 1 22 1196 1217 1196 1220 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.4	2.3e+02	3.5	0.9	3	21	60	78	58	79	0.93
2	20	0.21	21	6.8	2.3	1	23	239	262	239	262	0.91
3	20	0.043	4.3	9.0	3.5	1	23	268	291	268	291	0.98
4	20	0.0008	0.079	14.5	0.6	2	23	322	343	321	343	0.96
5	20	0.0012	0.12	13.9	1.0	1	23	420	443	420	443	0.97
6	20	0.043	4.2	9.0	2.5	2	23	451	472	450	472	0.97
7	20	0.062	6.1	8.5	0.1	2	20	532	550	531	553	0.94
8	20	0.01	1	11.0	3.9	3	23	626	647	624	647	0.95
9	20	0.01	1	11.0	0.4	1	22	654	675	654	675	0.95
10	20	0.0021	0.21	13.1	7.3	2	23	743	764	742	764	0.96
11	20	0.01	1	11.0	0.1	2	20	791	809	790	811	0.93
12	20	0.0002	0.02	16.3	5.2	1	23	857	880	857	880	0.98
13	20	0.009	0.88	11.1	0.7	1	23	917	940	917	940	0.97
14	20	1.5	1.5e+02	4.2	0.2	2	23	1000	1020	999	1020	0.92
15	20	0.003	0.3	12.6	2.0	1	23	1026	1049	1026	1049	0.98
16	20	4.9	4.8e+02	2.5	0.1	5	23	1088	1106	1087	1106	0.86
17	20	3.3e-06	0.00032	22.0	0.9	1	23	1112	1134	1112	1134	0.99
18	20	1.5e-05	0.0015	19.9	2.6	1	23	1140	1162	1140	1162	0.99
19	20	0.00011	0.011	17.1	2.1	1	23	1168	1190	1168	1190	0.96
20	20	0.022	2.1	9.9	1.9	1	22	1196	1217	1196	1220	0.90

Sequence Information

Coding Sequence: ATGACGAATGAATGCTTTATAAATGGAGTACAGTATAAATGTCGTACTTGCTTCGATCCTGTAACAACAGTATATCTACTTTCAGAGGAGTGCAACAACTACAGAGCTTGTCAATATTTATTGAATGACATTATTAAGTTAAAGACAAACGACGACGAGTTACTTCCAAAGACGATTTGTtcgaaatgtttaaaaaaactcGTCAGCTGCTACGATTTTATACTTCATATTCAAAATGTGAATGAAAAGTACCACCAACTCTTGGAAAGTCGCAAAAATTCTTCTCGAAATGATGGTCTTGCCAGCAGCTCTAGGAATATTACAGAACGTTTGGCAGAATCTGCAACTGTATTGCCTTTGGATCAGTATGTTTCGAAAATTAAGTTTGAAGACGAGTTCCTCATGTCTTACGATATTGTCTTAAATAGCGACGATAGAAGAAACGATTCGATCAAAGaagATACTTATGACGCTTATATGGAACATTTGAAGGAGGATATTGAGCTCTCTACAGATAAGTTGGAATACCAACGAAGatccCCAAATGAAGAAATAAATCAAGTTCTTGTAGATGATGTCAACGATTACGATTCCGAAAACAGGTCCTCATCCTCCAGTGATAGTGAACAAGACCTGCCCAATAGTCAGACATTCGGAAAGGAATCTGAAGAACAATTCTGCAAATACTTTCAAATCGAAAAAGTCAACGGTAATTTCGTATGTGGGGTGTGCAAACAATCATTTACGTTACAGAATTCTTGTCGCAGGCATATAGTTTTGAAGCACAGCCAAGCAAAATTGTTCCAATGCCGATTTTGCGACAGAAGTGTAAGATGTAAGGAATATTTAACTGCGCATATTAAACGTCTACATCCTGGCGAGTCGTTCGAATCCAATACAAAACAATTAGGTCGTTTGTTTGGAGAACGTTTGTATAGCAGACCACTTCTGTTACCACGACTGGAATGCAAGCTGTGTGATACTATTTTTGTAACTAAGAAAAAACTTCTTCAGCACTTAGATAGCCATAGTGAAGCCAGTACTCTTCACAGCTTAAAATTAAGCAGTGATATTATTCAACGTTGGTTTTCAAATATGAGCGACTTGCAAGTCATACAAACAATGATATGTAAAGATATTCGAGAAGAAAACCGGGTCAaatattacacaattttaaatgacTTTTCCTATGAAATGTCCATTAGTGATACGGATGCAGAAGATTTGGAAGAAAAAACAGAAGTGCCTGCCAACAAATATAAATGCGAATTGTGTGGAAAAGAGTTTTTGTTCAAATATCAAGTGTTTGCTCATATGAGAGAGAATCATTTGAACGAAGACATTCCATTGAGATGCAGCCATTGTAATCTGGAATTTATatcaataaaaatgtatgaacaacacaaacaaactcactGTCGAAATGAACATAAACTATTGCTTTGCCCCAATTGCAACGGCAAGTTTGTTTGGctcgaaaatatgaaaaaacacAATTGTGTAACGAAAATATTGGATATTGAGAAATCTCTAAATGATAAAATTAGAGAAAGGTATAATGAAGTAACGCGTTCTTCGCCAAAAACTGTCATAAGATGTGGTCTTTGTGAAATGGCCTTTGAAAAGCTGCGAGACTTACGACAGCACATGCCTTTGCATGCCGATGGCAAAACTGGAATTGACTTTAATGGTTGTATTTATGTAAATCAATTTGAACATTTATCCGACAATTGCGAGTTGTTGGAACAGAagattaaaaatgcatttacgAAACACCAAATAAGTCAACTGTATCAAGCCATCGATAAGGACGGCAAAGAAATGGACATTTCCGATTCGGATACCGATGAAGATGATGTTGATAAAAGTTGTTTGTGCGAACTCTGCTATGAAACGTTTAAAAGGCGAAAACTGCTGTTTAATCATCAAAAAGAACAACACAAGGATGTTTCAATGCCTTTCACTTGCAAAGAATGTAAGATGCAGTACGTTAGTATTGACTTGTTACAACAACATTTAAAGAGGGAATGTTGGAATGAACATCGAAGAGTTGCTGAGCAATGCGATTGTTGTAAAGAGCGTTTTATATGGCCGGAAAACATGTTGAGACATAGAGAAATACAGCGATACACAAGTATCAAAAATTCGCTTTCTGAAGACTTGTGTCGTACCAAGACAAAGAAAACGATGGCTTCATCAAGCTCAATTGACAATAtcaaaatttgttattgtttcgtATGTCCTAAAACATTCTGTAATACTGACCATTTAAATGATCATTTGATGCGCCATCGGTTAACACCATCCATCATCAAAACTGTTGCAAGCACAATACACTCCATATGGTGGCCAAATGGCAGAAAGATaatcaaatgcaaaatatgtaaCCAAGAATTTTCAAGTATTGCCAAATTAAATGAACACTACTCTCTAAAAAATCTGAAGAACGTGTGTGGTGCCATGCAACATTCTCTGTCAAATTACTCGGTTACTAATCAAATGGGGTTTGAATTACATTTAGAGCTGGATTCAGAAACAGAAActgaagaaaatgaaaatatattgccATATGTATGTTGCATATGTAGTAAATCATTTAAGCGAAAGTTTCAAATAACTCAACATCAAAGATCCATGCACAATTATGaaatgttggaatttaaatGTGAACGTTGTGTTTTCAGAACTGTATCACAGAAAGTTTTAGATTATCATAGAATGAGTCAGTGTTTTGATGTTGACAAAAAATACCAATGCGATCAGTGTAATTTCAAATTTATGTGGCAAGAGAACCTCGAACAGCATATTTCGATATTTCATAATTCAAACGTTTTCTTCAAAACATTGGATGCAGCCAACACGTCGTTTTTAAATGACGCAAGCAATATAAGCGCTCAATGCcttcaattaaaagaaaattcacAGAGTGATTTGTCATTAGCATTACATCAAAACTATTCAGATGCAGGGGAGTGCATTCAATCTAAAGATACAATACAATGTCTAATTTGTGGAATttacattaacaaaaattattattcagaACATATTAGGAGAcacaaatgtgacaaatcttacAAATGCACTTTTTGCGAATTGGTTTTTTTAACACGTGCCTCTTTAAGGAAGCATAAGCGCATGAGCCATAAACTTCATTCGGGTGAAAGTCCAAAAggacaaaataatttattatcgaCGTTAGAAAATAATTTGGACTCAACTGTTTCTAATCAACATCCACAAGGTACGAGAAAATTCAAATTATGTCCAATTTGTGGTGTCTATAGAAgaaatattgaaatacatattAGAAGCCACATGGAAGAGACGCCGTTCAAGTGCGATCTATGTGATAAAATCTTTAGCaccgaaattaatttatatgtgCATCGGCGCACACACTCTAGTAAACGTCCTTTTAAATGTACACTTTGTGAGAAAGCCTTTGTCCATGAATACAGATTAAAAGCTCACATGCGCTCTCACACTGGCGAGCGTCCATACGAGTGCACTGTTTGtcagaaaaaatttatcaatttggCCAATTTGAAGCATCATTCACTTAATCATACTGGCAAGAAATCCTTTATGTGTGAGATTTGCAATCGAGCCTTTAAGTGTGCCCCATATCTCAAAAGACATCGTATCAGAAAGGGCCATCATCCAGATAATAATTGA
Protein Sequence: MTNECFINGVQYKCRTCFDPVTTVYLLSEECNNYRACQYLLNDIIKLKTNDDELLPKTICSKCLKKLVSCYDFILHIQNVNEKYHQLLESRKNSSRNDGLASSSRNITERLAESATVLPLDQYVSKIKFEDEFLMSYDIVLNSDDRRNDSIKEDTYDAYMEHLKEDIELSTDKLEYQRRSPNEEINQVLVDDVNDYDSENRSSSSSDSEQDLPNSQTFGKESEEQFCKYFQIEKVNGNFVCGVCKQSFTLQNSCRRHIVLKHSQAKLFQCRFCDRSVRCKEYLTAHIKRLHPGESFESNTKQLGRLFGERLYSRPLLLPRLECKLCDTIFVTKKKLLQHLDSHSEASTLHSLKLSSDIIQRWFSNMSDLQVIQTMICKDIREENRVKYYTILNDFSYEMSISDTDAEDLEEKTEVPANKYKCELCGKEFLFKYQVFAHMRENHLNEDIPLRCSHCNLEFISIKMYEQHKQTHCRNEHKLLLCPNCNGKFVWLENMKKHNCVTKILDIEKSLNDKIRERYNEVTRSSPKTVIRCGLCEMAFEKLRDLRQHMPLHADGKTGIDFNGCIYVNQFEHLSDNCELLEQKIKNAFTKHQISQLYQAIDKDGKEMDISDSDTDEDDVDKSCLCELCYETFKRRKLLFNHQKEQHKDVSMPFTCKECKMQYVSIDLLQQHLKRECWNEHRRVAEQCDCCKERFIWPENMLRHREIQRYTSIKNSLSEDLCRTKTKKTMASSSSIDNIKICYCFVCPKTFCNTDHLNDHLMRHRLTPSIIKTVASTIHSIWWPNGRKIIKCKICNQEFSSIAKLNEHYSLKNLKNVCGAMQHSLSNYSVTNQMGFELHLELDSETETEENENILPYVCCICSKSFKRKFQITQHQRSMHNYEMLEFKCERCVFRTVSQKVLDYHRMSQCFDVDKKYQCDQCNFKFMWQENLEQHISIFHNSNVFFKTLDAANTSFLNDASNISAQCLQLKENSQSDLSLALHQNYSDAGECIQSKDTIQCLICGIYINKNYYSEHIRRHKCDKSYKCTFCELVFLTRASLRKHKRMSHKLHSGESPKGQNNLLSTLENNLDSTVSNQHPQGTRKFKLCPICGVYRRNIEIHIRSHMEETPFKCDLCDKIFSTEINLYVHRRTHSSKRPFKCTLCEKAFVHEYRLKAHMRSHTGERPYECTVCQKKFINLANLKHHSLNHTGKKSFMCEICNRAFKCAPYLKRHRIRKGHHPDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01398800;
90% Identity: iTF_01074838;
80% Identity: -