Basic Information

Insect: Tachina grossa
Gene Symbol: -
Assembly: GCA_949987645.1
Location: OX465277.1:19599427-19604194[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0002 0.026 16.5 0.3 1 23 124 147 124 147 0.97

2 13 8.3e-05 0.011 17.7 1.0 2 23 153 175 152 175 0.97

3 13 5.8e-05 0.0074 18.2 4.6 1 23 184 207 184 207 0.95

4 13 7.3e-06 0.00093 21.0 5.0 2 23 446 467 446 467 0.98

5 13 9.8e-06 0.0013 20.6 4.4 1 23 473 496 473 496 0.96

6 13 0.00018 0.023 16.7 2.1 1 23 501 524 501 524 0.98

7 13 6.2e-05 0.008 18.1 1.2 1 23 535 557 535 557 0.95

8 13 0.0056 0.72 12.0 4.1 1 23 562 585 562 585 0.97

9 13 3.4e-05 0.0043 18.9 0.8 1 23 591 613 591 613 0.96

10 13 0.00015 0.019 16.9 1.9 1 23 619 641 619 641 0.98

11 13 7.8e-07 0.0001 24.1 1.6 3 23 649 669 648 669 0.99

12 13 5.4e-07 7e-05 24.6 0.3 1 23 675 697 675 697 0.99

13 13 0.0028 0.36 12.9 0.2 1 23 702 725 702 725 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0002	0.026	16.5	0.3	1	23	124	147	124	147	0.97
2	13	8.3e-05	0.011	17.7	1.0	2	23	153	175	152	175	0.97
3	13	5.8e-05	0.0074	18.2	4.6	1	23	184	207	184	207	0.95
4	13	7.3e-06	0.00093	21.0	5.0	2	23	446	467	446	467	0.98
5	13	9.8e-06	0.0013	20.6	4.4	1	23	473	496	473	496	0.96
6	13	0.00018	0.023	16.7	2.1	1	23	501	524	501	524	0.98
7	13	6.2e-05	0.008	18.1	1.2	1	23	535	557	535	557	0.95
8	13	0.0056	0.72	12.0	4.1	1	23	562	585	562	585	0.97
9	13	3.4e-05	0.0043	18.9	0.8	1	23	591	613	591	613	0.96
10	13	0.00015	0.019	16.9	1.9	1	23	619	641	619	641	0.98
11	13	7.8e-07	0.0001	24.1	1.6	3	23	649	669	648	669	0.99
12	13	5.4e-07	7e-05	24.6	0.3	1	23	675	697	675	697	0.99
13	13	0.0028	0.36	12.9	0.2	1	23	702	725	702	725	0.98

Sequence Information

Coding Sequence: atggaTAAAAACACAAGTTGCAACAAAAGTGCTATTTGCCGTATATGCATGCAAaatgatgcaaatttattttccatCTTTAATGAAGTTTTCTTCGCAAATAAAACCATTACTATAGCCGAAATAATCTCGGAGTGTACAAAGTATCCAGTAGCACATAACGATCAGCTACCCGCACAAATATGCAACGTCTGCATGGAAGCGGCCCAAAACGCCCATCAGTTCAAAATGCAAACAGAAGAGGCGTATTGCCAGCTAAAGGCGTTGTATGATATAACTTGGGTTCCGAAACAGGAGAAGGGTGGTACTACTGTGAGAATGAGTGCCCTCACTACAGACAAGTATACACAAACTGAAAAGAGTAGTGTGTTTCAGTGTGAGATATGCCCGAAAAAGTTTTTCGTGGAACGTGAACTTAGAGAACATCGTGCTACAGTACACATTAATGATGGCAAAAAATGTCGAGTATGTGGCGAAACATTCATTCATTTGGGTCAATTAAAAGTCCACTTATCAACAGAACATCCCAGTGAGGGTATACGATGTGATTTTAAGTGTAATGTATGCTTAAGAGAGTTTACACGTAAAGACCATTTGAAAAGACATTTAATACACGTCCATAAGGTCAAAGACGAAAAATTGAATATCTCTAAAGTATCACTTGATGAACCTGAGATTGAAAATCCCACCGTACTGTCAGCTAGTTTAAATAACTACAGCAGTCATTGGCCAGATTACCAAGTGGACGATGACAACGAAACAAATGGTCGAAAGAATGAAACTATTGCCGCTACCAATCCATTCTCGAGTGAGGATGAGGGACTAGATCGACATGATTTCGATCACATGGATGAAAAAGATGTTAAACGATTTGTAGAAACCATAGCACATCCAGAGATATCCATTAAGGTGGAAAATTCTGAAGTCAGTTACAACAATTCAAGtgataaaaatgaaaaagtttttaaatacatcaaaaattcaattgacGAAGTGAAAGACCGATCCGCAATTAAACCAGAAAAATGTAACGAACAGTTAGAGCGCAAGGAGGATTACGATGACGAAGATGACACGAACaggaacaatttaattaaagaCCACTACAGCGATAACAATTCCAGTGGTGAAAATAGCACTGACAATGAATATGAAGATGACGAGGACGAGAACGAGGACGATGACTATAATTTCGAGAGCACTATGAAGGCCAATAAATTTTCAACGACAACCCGTATAAAACAAGTGCAAATTGATGTAAATGCTGAAAATCCTTCAAGTTCAACCGCAAAACCACCGAGACGACGTCATGGTTCTTCCAAAACCGAAGATAACCGCTGCAAGGAATGCAATCGCACATTTACCCGCTACAATCATTTGCTGCGTCATATGCTCACACATAGTGATGAAAAGCCTCATGTTTGTAAATTTTGTAGCAAAGGATTTTCACGTTCGGATCATTTGCAAAAGCAtatacaaagtatacattgcgAAAAGAACTACAAATGTGATCAATGCTCCAGTGCTTATGGCAGAAAAGATCATTTGCAAAGGCACATAGAAACAAGGCATAACAAAGATCCTTCTCTACAAAGGCCTCAATTTGATTGTGATATGTGTGAGAAAAAGTTTACGACCAAAGCCTATTTGGCAAAACATAAACTGCTTCATACTGATCGTCTTTATGCTTGCAAACATTGTTCAGAAACGTTTCAAGAAAAGGAACAAATGAAAGAACACCAAAAGAAAAAACACACCCAGCCACGTAATTTCCTGTGCAATATTTGCGGAGATTCATTTCAACGAAATGAATACCTTAAAATTCACATGCGCCGTCATACCGGTGAGAAACCTTATAAGTGTCGCTTTTGTGAAAAGGGTTTTCCGCGAAGTACAGATTTGAAAATGCACGAAAGGTATCACATGGGACACAAACCAAATCTATGCAATTTATGCGGCAAAGGTTTTCATCGTCCCTACAATTTAACTATACATATGCGTACGCATACTGGCGAAAAACCTTACAAATGCAATCAATGTCCTCAAGCGTTCGCTCAAAGCAACGATTTGAAAGCCCATATAAGACGCCATACGGGAGAACGTTTTCGGTGTGATTTGTGCAGTGCTGCATTCTTGCAACGTTATGGCTTAAATGCTCACTTAAGAACGATACATGGTATAATAGTTACTTCATTTACTGGACGCTTGCGTAAAACTGACCAGCCCACTGATCATGGTGCTGAGCAACTTGATCAGCAACCAACAGCAGAGCCGCCACTGGCACAAGCAGCTACTGCTGCTACCGAGCAGTCACAAACTGCTCTGCCTTCGCCCAGTTTAGATAGTAACGTTACACCGCCGCCTTTGTATTTAGGTCATCATTTTATAAATCCCATACCTGTTGTGGCCACCCTTGCACCAACATCCCCTATTGACATTTCGTCCAGCAGTGCATCAACGTTGCCCCTTCCGTTACCACATGCTCCGCCGTCGCAACAAATGTAA
Protein Sequence: MDKNTSCNKSAICRICMQNDANLFSIFNEVFFANKTITIAEIISECTKYPVAHNDQLPAQICNVCMEAAQNAHQFKMQTEEAYCQLKALYDITWVPKQEKGGTTVRMSALTTDKYTQTEKSSVFQCEICPKKFFVERELREHRATVHINDGKKCRVCGETFIHLGQLKVHLSTEHPSEGIRCDFKCNVCLREFTRKDHLKRHLIHVHKVKDEKLNISKVSLDEPEIENPTVLSASLNNYSSHWPDYQVDDDNETNGRKNETIAATNPFSSEDEGLDRHDFDHMDEKDVKRFVETIAHPEISIKVENSEVSYNNSSDKNEKVFKYIKNSIDEVKDRSAIKPEKCNEQLERKEDYDDEDDTNRNNLIKDHYSDNNSSGENSTDNEYEDDEDENEDDDYNFESTMKANKFSTTTRIKQVQIDVNAENPSSSTAKPPRRRHGSSKTEDNRCKECNRTFTRYNHLLRHMLTHSDEKPHVCKFCSKGFSRSDHLQKHIQSIHCEKNYKCDQCSSAYGRKDHLQRHIETRHNKDPSLQRPQFDCDMCEKKFTTKAYLAKHKLLHTDRLYACKHCSETFQEKEQMKEHQKKKHTQPRNFLCNICGDSFQRNEYLKIHMRRHTGEKPYKCRFCEKGFPRSTDLKMHERYHMGHKPNLCNLCGKGFHRPYNLTIHMRTHTGEKPYKCNQCPQAFAQSNDLKAHIRRHTGERFRCDLCSAAFLQRYGLNAHLRTIHGIIVTSFTGRLRKTDQPTDHGAEQLDQQPTAEPPLAQAATAATEQSQTALPSPSLDSNVTPPPLYLGHHFINPIPVVATLAPTSPIDISSSSASTLPLPLPHAPPSQQM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00742112;
90% Identity: iTF_01074690; iTF_01397719; iTF_01399684;
80% Identity: -